RNA–Protein interactions for RNA: ENSMUST00000042824.12

Herc1-201, Transcript of HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Herc1, Length 15,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1-201ENSMUST00000042824 Nsd2Q8BVE8 1365 aa7.66□□□□□ -1.18
Herc1-201ENSMUST00000042824 Fgd1P52734 960 aa7.65□□□□□ -1.18
Herc1-201ENSMUST00000042824 Lamc3Q9R0B6 1581 aa7.65□□□□□ -1.19
Herc1-201ENSMUST00000042824 Tmf1B9EKI3 1091 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 Top2bQ64511 1612 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 Calr4Q3TQS0 420 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 Mapk8ip2Q9ERE9 830 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 DaxxO35613 739 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 Mroh2bQ7M6Y6 1581 aa7.64□□□□□ -1.19
Herc1-201ENSMUST00000042824 Psme1P97371 249 aa7.63□□□□□ -1.19
Herc1-201ENSMUST00000042824 Fam163aQ8CAA5 168 aa7.63□□□□□ -1.19
Herc1-201ENSMUST00000042824 Spag9Q58A65 1321 aaKnown RBP7.63□□□□□ -1.19
Herc1-201ENSMUST00000042824 Crocc2F6XLV1 1638 aa7.63□□□□□ -1.19
Herc1-201ENSMUST00000042824 Mbd3Q9Z2D8 285 aaKnown RBP7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Camsap1A2AHC3 1581 aa7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Rundc1Q0VDN7 615 aa7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Txndc2Q6P902 515 aa7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Eif4g2Q62448 906 aaKnown RBP7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Srcin1Q9QWI6 1250 aa7.62□□□□□ -1.19
Herc1-201ENSMUST00000042824 Ifit1bl1D3Z6F0 470 aa7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Rad21Q61550 635 aaKnown RBP7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Hspa5P20029 655 aaKnown RBP7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Arhgap31A6X8Z5 1425 aa7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Ythdc1E9Q5K9 736 aaKnown RBP7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Gm7298A0A0N4SVU1 1476 aa7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Ofd1Q80Z25 1017 aa7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Gm14025A2AP89 1413 aa7.61□□□□□ -1.19
Herc1-201ENSMUST00000042824 Ankrd36D3Z4K0 1415 aa7.6□□□□□ -1.19
Herc1-201ENSMUST00000042824 Igf1rQ60751 1373 aa7.6□□□□□ -1.19
Herc1-201ENSMUST00000042824 AqrQ8CFQ3 1481 aaKnown RBP7.6□□□□□ -1.19
Herc1-201ENSMUST00000042824 CenpjQ569L8 1344 aa7.6□□□□□ -1.19
Herc1-201ENSMUST00000042824 Rad54l2Q99NG0 1466 aa7.59□□□□□ -1.19
Herc1-201ENSMUST00000042824 Tdrd9Q14BI7 1383 aa7.58□□□□□ -1.2
Herc1-201ENSMUST00000042824 Ccdc141E9Q8Q6 1531 aa7.58□□□□□ -1.2
Herc1-201ENSMUST00000042824 EprsQ8CGC7 1512 aaKnown RBP7.58□□□□□ -1.2
Herc1-201ENSMUST00000042824 Pde3bQ61409 1100 aa7.57□□□□□ -1.2
Herc1-201ENSMUST00000042824 Wdr43Q6ZQL4 677 aaKnown RBP7.57□□□□□ -1.2
Herc1-201ENSMUST00000042824 TchhA0A0B4J1F9 1599 aa7.57□□□□□ -1.2
Herc1-201ENSMUST00000042824 Rab11fip3Q8CHD8 1047 aa7.56□□□□□ -1.2
Herc1-201ENSMUST00000042824 Vps8Q0P5W1 1427 aa7.56□□□□□ -1.2
Herc1-201ENSMUST00000042824 Arhgef5E9Q7D5 1581 aa7.56□□□□□ -1.2
Herc1-201ENSMUST00000042824 MlecQ6ZQI3 291 aaKnown RBP7.56□□□□□ -1.2
Herc1-201ENSMUST00000042824 Plb1Q3TTY0 1478 aa7.56□□□□□ -1.2
Herc1-201ENSMUST00000042824 SynmQ70IV5 1561 aa7.55□□□□□ -1.2
Herc1-201ENSMUST00000042824 Rtf1A2AQ19 715 aaKnown RBP7.55□□□□□ -1.2
Herc1-201ENSMUST00000042824 Zscan21Q07231 555 aa7.55□□□□□ -1.2
Herc1-201ENSMUST00000042824 Aplp2Q06335 707 aa7.55□□□□□ -1.2
Herc1-201ENSMUST00000042824 ErbinQ80TH2 1402 aa7.55□□□□□ -1.2
Herc1-201ENSMUST00000042824 Naip1Q9QWK5 1403 aa7.54□□□□□ -1.2
Herc1-201ENSMUST00000042824 Arhgap5P97393 1501 aa7.54□□□□□ -1.2
Herc1-201ENSMUST00000042824 HnrnpuQ8VEK3 800 aaKnown RBP7.54□□□□□ -1.2
Herc1-201ENSMUST00000042824 Map7O88735 730 aa7.54□□□□□ -1.2
Herc1-201ENSMUST00000042824 NgefQ8CHT1 710 aa7.54□□□□□ -1.2
Herc1-201ENSMUST00000042824 Ap3b2Q9JME5 1082 aa7.53□□□□□ -1.2
Herc1-201ENSMUST00000042824 Usp47Q8BY87 1376 aa7.53□□□□□ -1.2
Herc1-201ENSMUST00000042824 Utp14aQ640M1 767 aaKnown RBP7.53□□□□□ -1.2
Herc1-201ENSMUST00000042824 Stk26Q99JT2 416 aa7.53□□□□□ -1.2
Herc1-201ENSMUST00000042824 Il16O54824 1322 aa7.52□□□□□ -1.21
Herc1-201ENSMUST00000042824 Rwdd1Q9CQK7 243 aa7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 Aebp2Q9Z248 504 aaKnown RBP7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 Mak16Q8BGS0 296 aaKnown RBP7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 Ciz1Q8VEH2 845 aa7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 Fam135aQ6NS59 1506 aa7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 Ppp4r2Q0VGB7 417 aa7.51□□□□□ -1.21
Herc1-201ENSMUST00000042824 CatipB9EKE5 520 aa7.5□□□□□ -1.21
Herc1-201ENSMUST00000042824 Gm6268A2A3U9 297 aa7.5□□□□□ -1.21
Herc1-201ENSMUST00000042824 Tiam1Q60610 1591 aa7.5□□□□□ -1.21
Herc1-201ENSMUST00000042824 FanciQ8K368 1330 aa7.49□□□□□ -1.21
Herc1-201ENSMUST00000042824 Sart3Q9JLI8 962 aaKnown RBP7.49□□□□□ -1.21
Herc1-201ENSMUST00000042824 Znf326O88291 580 aa7.49□□□□□ -1.21
Herc1-201ENSMUST00000042824 Fan1Q69ZT1 1020 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Grin2aP35436 1464 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Pde4cQ3UEI1 686 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Dcaf11Q91VU6 549 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 KnstrnQ9D9Z1 312 aaKnown RBP7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Golga2Q921M4 999 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 AampJ3QN89 436 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 U2af1Q9D883 239 aaKnown RBP7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Trim26Q99PN3 545 aa7.48□□□□□ -1.21
Herc1-201ENSMUST00000042824 Cnga1P29974 684 aa7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Caskin1Q6P9K8 1431 aa7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Hsp90aa1P07901 733 aaKnown RBP7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Ggt6Q6PDE7 497 aa7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Magi1Q6RHR9 1471 aa7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Rangap1P46061 589 aaKnown RBP7.47□□□□□ -1.21
Herc1-201ENSMUST00000042824 Mlh3A0A1Y7VMP7 1443 aa7.46□□□□□ -1.21
Herc1-201ENSMUST00000042824 Csrnp3P59055 597 aa7.46□□□□□ -1.21
Herc1-201ENSMUST00000042824 Arap1Q4LDD4 1452 aa7.46□□□□□ -1.21
Herc1-201ENSMUST00000042824 Ccdc9Q8VC31 543 aaKnown RBP7.46□□□□□ -1.22
Herc1-201ENSMUST00000042824 Neurod2Q62414 383 aa7.46□□□□□ -1.22
Herc1-201ENSMUST00000042824 Wwc2Q6NXJ0 1187 aa7.45□□□□□ -1.22
Herc1-201ENSMUST00000042824 Dapk1Q80YE7 1442 aa7.45□□□□□ -1.22
Herc1-201ENSMUST00000042824 Shq1Q7TMX5 569 aa7.45□□□□□ -1.22
Herc1-201ENSMUST00000042824 Usp40Q8BWR4 1235 aa7.45□□□□□ -1.22
Herc1-201ENSMUST00000042824 Ppm1gQ61074 542 aa7.45□□□□□ -1.22
Herc1-201ENSMUST00000042824 A2mQ6GQT1 1474 aa7.44□□□□□ -1.22
Herc1-201ENSMUST00000042824 Fam184bQ0KK56 942 aa7.44□□□□□ -1.22
Herc1-201ENSMUST00000042824 PtprkP35822 1457 aa7.44□□□□□ -1.22
Herc1-201ENSMUST00000042824 Slc4a1apE9PX68 744 aa7.44□□□□□ -1.22
Herc1-201ENSMUST00000042824 Cd109Q8R422 1442 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms