RNA–Protein interactions for RNA: ENSMUST00000042824.12

Herc1-201, Transcript of HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Herc1, Length 15,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1-201ENSMUST00000042824 Rhox8Q6VSS7 320 aa10.48□□□□□ -0.73
Herc1-201ENSMUST00000042824 NischQ80TM9 1593 aa9.93□□□□□ -0.82
Herc1-201ENSMUST00000042824 Trim41Q5NCC3 630 aa9.46□□□□□ -0.89
Herc1-201ENSMUST00000042824 Esf1Q3V1V3 845 aaKnown RBP9.41□□□□□ -0.9
Herc1-201ENSMUST00000042824 Abcc9P70170 1546 aa9.34□□□□□ -0.91
Herc1-201ENSMUST00000042824 Rpgrip1Q9EPQ2 1331 aa9.33□□□□□ -0.92
Herc1-201ENSMUST00000042824 Ccdc136Q3TVA9 1136 aa9.32□□□□□ -0.92
Herc1-201ENSMUST00000042824 Rtl1Q7M732 1744 aa9.25□□□□□ -0.93
Herc1-201ENSMUST00000042824 Cngb1E1AZ71 1325 aa9.24□□□□□ -0.93
Herc1-201ENSMUST00000042824 Abcc8B2RUS7 1588 aa9.16□□□□□ -0.94
Herc1-201ENSMUST00000042824 Ccdc180J3QNE4 1664 aa9.11□□□□□ -0.95
Herc1-201ENSMUST00000042824 Gm35339A0A140LHH9 1649 aa9.1□□□□□ -0.95
Herc1-201ENSMUST00000042824 Zeb1Q64318 1117 aa9.1□□□□□ -0.95
Herc1-201ENSMUST00000042824 Npm2Q80W85 207 aa9.09□□□□□ -0.95
Herc1-201ENSMUST00000042824 HrcG5E8J6 738 aa8.99□□□□□ -0.97
Herc1-201ENSMUST00000042824 Zcchc6Q5BLK4 1491 aaKnown RBP8.99□□□□□ -0.97
Herc1-201ENSMUST00000042824 Gab3Q8BSM5 595 aa8.94□□□□□ -0.98
Herc1-201ENSMUST00000042824 Las1lA2BE28 776 aaKnown RBP8.92□□□□□ -0.98
Herc1-201ENSMUST00000042824 Ube2uB1AUC4 352 aa8.89□□□□□ -0.99
Herc1-201ENSMUST00000042824 Myt1lP97500 1187 aa8.88□□□□□ -0.99
Herc1-201ENSMUST00000042824 NacadQ5SWP3 1504 aa8.77□□□□□ -1.01
Herc1-201ENSMUST00000042824 Il27Q8K3I6 234 aa8.76□□□□□ -1.01
Herc1-201ENSMUST00000042824 Brd4Q9ESU6 1400 aaKnown RBP8.75□□□□□ -1.01
Herc1-201ENSMUST00000042824 NefmP08553 848 aa8.75□□□□□ -1.01
Herc1-201ENSMUST00000042824 Ehmt2Q9Z148 1263 aaKnown RBP8.74□□□□□ -1.01
Herc1-201ENSMUST00000042824 Rb1cc1Q9ESK9 1588 aa8.72□□□□□ -1.01
Herc1-201ENSMUST00000042824 Npm1Q61937 292 aaKnown RBP8.72□□□□□ -1.01
Herc1-201ENSMUST00000042824 Pelp1Q9DBD5 1123 aaKnown RBP8.7□□□□□ -1.02
Herc1-201ENSMUST00000042824 Dcaf1Q80TR8 1506 aa8.67□□□□□ -1.02
Herc1-201ENSMUST00000042824 Wdr66E9Q743 1299 aa8.66□□□□□ -1.02
Herc1-201ENSMUST00000042824 UbtfP25976 765 aaKnown RBP8.6□□□□□ -1.03
Herc1-201ENSMUST00000042824 Stra8P70278 393 aa8.59□□□□□ -1.03
Herc1-201ENSMUST00000042824 Baz1aO88379 1555 aa8.59□□□□□ -1.03
Herc1-201ENSMUST00000042824 Acin1Q9JIX8 1338 aaKnown RBP8.58□□□□□ -1.04
Herc1-201ENSMUST00000042824 NclP09405 707 aaKnown RBP8.51□□□□□ -1.05
Herc1-201ENSMUST00000042824 Ubl4bQ9CQ84 188 aa8.5□□□□□ -1.05
Herc1-201ENSMUST00000042824 Hdac5Q9Z2V6 1113 aa8.5□□□□□ -1.05
Herc1-201ENSMUST00000042824 Amer1Q7TS75 1132 aa8.48□□□□□ -1.05
Herc1-201ENSMUST00000042824 Anp32bQ9EST5 272 aaKnown RBP8.48□□□□□ -1.05
Herc1-201ENSMUST00000042824 Kdm5dQ62240 1548 aa8.47□□□□□ -1.05
Herc1-201ENSMUST00000042824 Ercc6F8VPZ5 1481 aa8.46□□□□□ -1.06
Herc1-201ENSMUST00000042824 Fam50aQ9WV03 339 aaKnown RBP8.45□□□□□ -1.06
Herc1-201ENSMUST00000042824 Cep164Q5DU05 1446 aa8.44□□□□□ -1.06
Herc1-201ENSMUST00000042824 Crybg2B7ZCC2 1516 aa8.44□□□□□ -1.06
Herc1-201ENSMUST00000042824 Pds5bQ4VA53 1446 aaKnown RBP8.42□□□□□ -1.06
Herc1-201ENSMUST00000042824 Rsf1E9PWW9 1441 aaKnown RBP8.41□□□□□ -1.06
Herc1-201ENSMUST00000042824 Ap3b1Q9Z1T1 1105 aa8.39□□□□□ -1.07
Herc1-201ENSMUST00000042824 Ccer2J3QPU5 274 aa8.36□□□□□ -1.07
Herc1-201ENSMUST00000042824 Cdk11bP24788 784 aaKnown RBP8.36□□□□□ -1.07
Herc1-201ENSMUST00000042824 CenpbP27790 599 aa8.35□□□□□ -1.07
Herc1-201ENSMUST00000042824 Ccdc18Q640L5 1455 aa8.35□□□□□ -1.07
Herc1-201ENSMUST00000042824 Golga3P55937 1487 aa8.35□□□□□ -1.07
Herc1-201ENSMUST00000042824 Sycp2Q9CUU3 1500 aa8.34□□□□□ -1.07
Herc1-201ENSMUST00000042824 Os9Q8K2C7 672 aa8.32□□□□□ -1.08
Herc1-201ENSMUST00000042824 Clip1Q922J3 1391 aa8.31□□□□□ -1.08
Herc1-201ENSMUST00000042824 Kif15Q6P9L6 1387 aa8.31□□□□□ -1.08
Herc1-201ENSMUST00000042824 NrdcQ8BHG1 1161 aa8.3□□□□□ -1.08
Herc1-201ENSMUST00000042824 TonslQ6NZL6 1363 aa8.29□□□□□ -1.08
Herc1-201ENSMUST00000042824 Myt1Q8CFC2 1127 aa8.26□□□□□ -1.09
Herc1-201ENSMUST00000042824 Clstn2Q9ER65 966 aa8.25□□□□□ -1.09
Herc1-201ENSMUST00000042824 Lmod2Q3UHZ5 550 aa8.25□□□□□ -1.09
Herc1-201ENSMUST00000042824 Chic1Q8CBW7 227 aa8.23□□□□□ -1.09
Herc1-201ENSMUST00000042824 Tnnt3Q9QZ47 272 aa8.23□□□□□ -1.09
Herc1-201ENSMUST00000042824 4930567H17RikQ3V0K5 233 aa8.22□□□□□ -1.09
Herc1-201ENSMUST00000042824 Plekhg3Q4VAC9 1341 aa8.22□□□□□ -1.09
Herc1-201ENSMUST00000042824 Gm13697A2AK42 830 aa8.21□□□□□ -1.09
Herc1-201ENSMUST00000042824 Neurod1Q60867 357 aa8.21□□□□□ -1.1
Herc1-201ENSMUST00000042824 Hnrnpul2Q00PI9 745 aaKnown RBP8.2□□□□□ -1.1
Herc1-201ENSMUST00000042824 Atad2bE9Q166 1460 aaKnown RBP8.2□□□□□ -1.1
Herc1-201ENSMUST00000042824 ScribQ80U72 1612 aa8.19□□□□□ -1.1
Herc1-201ENSMUST00000042824 Mier1Q5UAK0 511 aa8.19□□□□□ -1.1
Herc1-201ENSMUST00000042824 Setd5Q5XJV7 1441 aa8.17□□□□□ -1.1
Herc1-201ENSMUST00000042824 Fmn1Q05860 1466 aa8.17□□□□□ -1.1
Herc1-201ENSMUST00000042824 Slc24a1Q91WD8 1130 aa8.17□□□□□ -1.1
Herc1-201ENSMUST00000042824 NeflP08551 543 aa8.17□□□□□ -1.1
Herc1-201ENSMUST00000042824 Eea1Q8BL66 1411 aa8.16□□□□□ -1.1
Herc1-201ENSMUST00000042824 Ttbk1Q6PCN3 1308 aa8.16□□□□□ -1.1
Herc1-201ENSMUST00000042824 Phldb1Q6PDH0 1371 aaKnown RBP8.15□□□□□ -1.1
Herc1-201ENSMUST00000042824 BlmO88700 1416 aa8.15□□□□□ -1.11
Herc1-201ENSMUST00000042824 Smarca2Q6DIC0 1577 aa8.13□□□□□ -1.11
Herc1-201ENSMUST00000042824 Ifnlr1Q8CGK5 535 aa8.13□□□□□ -1.11
Herc1-201ENSMUST00000042824 Fkbp15Q6P9Q6 1216 aaKnown RBP8.12□□□□□ -1.11
Herc1-201ENSMUST00000042824 Smarca4Q3TKT4 1613 aaKnown RBP8.12□□□□□ -1.11
Herc1-201ENSMUST00000042824 Nop58Q6DFW4 536 aaKnown RBP8.11□□□□□ -1.11
Herc1-201ENSMUST00000042824 CftrP26361 1476 aa8.1□□□□□ -1.11
Herc1-201ENSMUST00000042824 Cttnbp2B9EJA2 1648 aa8.08□□□□□ -1.12
Herc1-201ENSMUST00000042824 ClspnQ80YR7 1315 aa8.08□□□□□ -1.12
Herc1-201ENSMUST00000042824 Gm13695A2AK44 830 aa8.07□□□□□ -1.12
Herc1-201ENSMUST00000042824 Zbtb7cQ8VCZ7 619 aa8.07□□□□□ -1.12
Herc1-201ENSMUST00000042824 Erich6D3Z6S9 713 aa8.07□□□□□ -1.12
Herc1-201ENSMUST00000042824 Atp1b4Q99ME6 356 aa8.05□□□□□ -1.12
Herc1-201ENSMUST00000042824 Arhgap27A2AB59 869 aa8.03□□□□□ -1.12
Herc1-201ENSMUST00000042824 Cux2P70298 1426 aa8.03□□□□□ -1.12
Herc1-201ENSMUST00000042824 Mia2Q91ZV0 1396 aa8.02□□□□□ -1.13
Herc1-201ENSMUST00000042824 Pcgf6Q99NA9 353 aa8.02□□□□□ -1.13
Herc1-201ENSMUST00000042824 Safb2Q80YR5 991 aaKnown RBP8.01□□□□□ -1.13
Herc1-201ENSMUST00000042824 4933416C03RikQ3V063 378 aa7.99□□□□□ -1.13
Herc1-201ENSMUST00000042824 Nlrp6Q91WS2 869 aa7.99□□□□□ -1.13
Herc1-201ENSMUST00000042824 Rsph4aQ8BYM7 716 aa7.98□□□□□ -1.13
Herc1-201ENSMUST00000042824 Iqgap2Q3UQ44 1575 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms