RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Dixdc1Q80Y83 711 aa8.17□□□□□ -1.1
Clk1-201ENSMUST00000034868 Rpgrip1Q9EPQ2 1331 aa8.16□□□□□ -1.1
Clk1-201ENSMUST00000034868 IncenpQ9WU62 880 aa8.15□□□□□ -1.1
Clk1-201ENSMUST00000034868 Bcl11bQ99PV8 884 aa8.15□□□□□ -1.11
Clk1-201ENSMUST00000034868 4933416C03RikQ3V063 378 aa8.14□□□□□ -1.11
Clk1-201ENSMUST00000034868 Gimap6Q8K349 305 aa8.14□□□□□ -1.11
Clk1-201ENSMUST00000034868 Pcgf6Q99NA9 353 aa8.14□□□□□ -1.11
Clk1-201ENSMUST00000034868 E9Q0B3 247 aa8.13□□□□□ -1.11
Clk1-201ENSMUST00000034868 Aplp2Q06335 707 aa8.13□□□□□ -1.11
Clk1-201ENSMUST00000034868 Plcd3Q8K2J0 785 aa8.12□□□□□ -1.11
Clk1-201ENSMUST00000034868 Ppfia1B2RXQ2 1266 aa8.12□□□□□ -1.11
Clk1-201ENSMUST00000034868 Prom2Q3UUY6 835 aa8.12□□□□□ -1.11
Clk1-201ENSMUST00000034868 OsbpQ3B7Z2 805 aa8.1□□□□□ -1.11
Clk1-201ENSMUST00000034868 Gpr37Q9QY42 600 aa8.08□□□□□ -1.12
Clk1-201ENSMUST00000034868 Fnbp4Q6ZQ03 1031 aa8.07□□□□□ -1.12
Clk1-201ENSMUST00000034868 Tpcn2Q8BWC0 731 aa8.07□□□□□ -1.12
Clk1-201ENSMUST00000034868 Ndufv2Q9D6J6 248 aa8.07□□□□□ -1.12
Clk1-201ENSMUST00000034868 Pdzrn4E9PUZ9 1014 aa8.06□□□□□ -1.12
Clk1-201ENSMUST00000034868 Dok7Q18PE0 504 aa8.06□□□□□ -1.12
Clk1-201ENSMUST00000034868 TraipQ8VIG6 470 aa8.06□□□□□ -1.12
Clk1-201ENSMUST00000034868 Apbb1Q9QXJ1 710 aa8.05□□□□□ -1.12
Clk1-201ENSMUST00000034868 Pcdhb20Q91XZ9 799 aa8.05□□□□□ -1.12
Clk1-201ENSMUST00000034868 Pdia6Q922R8 440 aaKnown RBP8.05□□□□□ -1.12
Clk1-201ENSMUST00000034868 Map2k5Q9WVS7 448 aa8.05□□□□□ -1.12
Clk1-201ENSMUST00000034868 Kiaa1211Q5PR69 1207 aa8.04□□□□□ -1.12
Clk1-201ENSMUST00000034868 Tox2A2A472 547 aa8.03□□□□□ -1.12
Clk1-201ENSMUST00000034868 Prr7Q3V0I2 269 aa8.03□□□□□ -1.12
Clk1-201ENSMUST00000034868 Znf579Q80VM4 562 aa8.03□□□□□ -1.12
Clk1-201ENSMUST00000034868 NppbP40753 121 aa8.02□□□□□ -1.13
Clk1-201ENSMUST00000034868 SnphQ80U23 495 aa8.02□□□□□ -1.13
Clk1-201ENSMUST00000034868 Uri1Q3TLD5 531 aa8.01□□□□□ -1.13
Clk1-201ENSMUST00000034868 Tulp1Q9Z273 543 aa8.01□□□□□ -1.13
Clk1-201ENSMUST00000034868 Kiaa1522A2A7S8 1013 aa8□□□□□ -1.13
Clk1-201ENSMUST00000034868 Bclaf1Q8K019 919 aaKnown RBP8□□□□□ -1.13
Clk1-201ENSMUST00000034868 Fbxo3Q9DC63 480 aa8□□□□□ -1.13
Clk1-201ENSMUST00000034868 Pkd2O35245 966 aa7.99□□□□□ -1.13
Clk1-201ENSMUST00000034868 XpcP51612 930 aa7.99□□□□□ -1.13
Clk1-201ENSMUST00000034868 Recql4Q75NR7 1216 aaKnown RBP7.99□□□□□ -1.13
Clk1-201ENSMUST00000034868 Gtf3c5Q8R2T8 520 aa7.99□□□□□ -1.13
Clk1-201ENSMUST00000034868 Gtf3c3Q3TMP1 882 aa7.98□□□□□ -1.13
Clk1-201ENSMUST00000034868 Ccdc102aQ3TMW1 549 aa7.98□□□□□ -1.13
Clk1-201ENSMUST00000034868 Ppfibp2O35711 882 aa7.97□□□□□ -1.13
Clk1-201ENSMUST00000034868 Irf5P56477 497 aa7.97□□□□□ -1.13
Clk1-201ENSMUST00000034868 Las1lA2BE28 776 aaKnown RBP7.96□□□□□ -1.14
Clk1-201ENSMUST00000034868 Gjc2Q8BQU6 440 aa7.96□□□□□ -1.14
Clk1-201ENSMUST00000034868 BccipQ9CWI3 316 aa7.96□□□□□ -1.14
Clk1-201ENSMUST00000034868 ZyxQ62523 564 aa7.94□□□□□ -1.14
Clk1-201ENSMUST00000034868 Rnf225Q9D7D1 332 aa7.92□□□□□ -1.14
Clk1-201ENSMUST00000034868 Prim1P20664 417 aa7.9□□□□□ -1.14
Clk1-201ENSMUST00000034868 RydenQ8CAK3 290 aaKnown RBP7.89□□□□□ -1.15
Clk1-201ENSMUST00000034868 Clec2iQ9WVF9 217 aa7.88□□□□□ -1.15
Clk1-201ENSMUST00000034868 Eya1P97767 591 aa7.87□□□□□ -1.15
Clk1-201ENSMUST00000034868 Ffar3Q3UFD7 319 aa7.87□□□□□ -1.15
Clk1-201ENSMUST00000034868 Lmod2Q3UHZ5 550 aa7.87□□□□□ -1.15
Clk1-201ENSMUST00000034868 4930567H17RikQ3V0K5 233 aa7.87□□□□□ -1.15
Clk1-201ENSMUST00000034868 Evi5P97366 809 aa7.86□□□□□ -1.15
Clk1-201ENSMUST00000034868 Lrrc14bQ3UJB3 510 aa7.86□□□□□ -1.15
Clk1-201ENSMUST00000034868 Fkbp4P30416 458 aa7.85□□□□□ -1.15
Clk1-201ENSMUST00000034868 Aldh16a1Q571I9 802 aa7.85□□□□□ -1.15
Clk1-201ENSMUST00000034868 Map3k10Q66L42 940 aa7.85□□□□□ -1.15
Clk1-201ENSMUST00000034868 Abcf1Q6P542 837 aaKnown RBP7.85□□□□□ -1.15
Clk1-201ENSMUST00000034868 Hic1Q9R1Y5 733 aa7.85□□□□□ -1.15
Clk1-201ENSMUST00000034868 Rnf25Q9QZR0 456 aa7.84□□□□□ -1.15
Clk1-201ENSMUST00000034868 AW822073A0A0N4SUK1 652 aa7.82□□□□□ -1.16
Clk1-201ENSMUST00000034868 Hs1bp3Q3TC93 395 aa7.82□□□□□ -1.16
Clk1-201ENSMUST00000034868 Fchsd2Q3USJ8 740 aa7.82□□□□□ -1.16
Clk1-201ENSMUST00000034868 Dcbld2Q91ZV3 769 aa7.82□□□□□ -1.16
Clk1-201ENSMUST00000034868 Arih1Q9Z1K5 555 aa7.82□□□□□ -1.16
Clk1-201ENSMUST00000034868 Otop3Q80UF9 577 aa7.81□□□□□ -1.16
Clk1-201ENSMUST00000034868 OscarQ8VBT3 265 aa7.81□□□□□ -1.16
Clk1-201ENSMUST00000034868 Themis2Q91YX0 663 aa7.8□□□□□ -1.16
Clk1-201ENSMUST00000034868 Gm11555B1AQ89 175 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 LipiF6YQT7 476 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Pknox2Q8BG99 474 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Kri1Q8VDQ9 704 aaKnown RBP7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Slc12a5Q91V14 1138 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Cdk11bP24788 784 aaKnown RBP7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 MarsQ68FL6 902 aaKnown RBP7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Prr18Q6PAN7 307 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 Znf516Q7TSH3 1157 aa7.79□□□□□ -1.16
Clk1-201ENSMUST00000034868 GnpatP98192 678 aa7.78□□□□□ -1.16
Clk1-201ENSMUST00000034868 Skiv2lQ6NZR5 1244 aa7.78□□□□□ -1.16
Clk1-201ENSMUST00000034868 Ptcd1Q8C2E4 695 aaKnown RBP7.78□□□□□ -1.16
Clk1-201ENSMUST00000034868 Ankrd65F6YK91 380 aa7.77□□□□□ -1.17
Clk1-201ENSMUST00000034868 Actn4P57780 912 aaKnown RBP7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 Eif5bQ05D44 1216 aaKnown RBP7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 Gm11563B1AQ90 168 aa7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 Fkbp15Q6P9Q6 1216 aaKnown RBP7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 NptxrQ99J85 493 aa7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 Krtap4-7Q9D732 168 aa7.76□□□□□ -1.17
Clk1-201ENSMUST00000034868 Phox2bO35690 314 aa7.74□□□□□ -1.17
Clk1-201ENSMUST00000034868 Kank4Q6P9J5 1016 aa7.74□□□□□ -1.17
Clk1-201ENSMUST00000034868 Abcc9P70170 1546 aa7.73□□□□□ -1.17
Clk1-201ENSMUST00000034868 Adra2bP30545 450 aa7.73□□□□□ -1.17
Clk1-201ENSMUST00000034868 Nkx2-3P97334 362 aa7.73□□□□□ -1.17
Clk1-201ENSMUST00000034868 Jph4Q80WT0 628 aa7.73□□□□□ -1.17
Clk1-201ENSMUST00000034868 Gm20521D3Z5F7 333 aa7.72□□□□□ -1.17
Clk1-201ENSMUST00000034868 Pcdh10E9PXQ7 1057 aa7.72□□□□□ -1.17
Clk1-201ENSMUST00000034868 HrcG5E8J6 738 aa7.71□□□□□ -1.17
Clk1-201ENSMUST00000034868 Alkbh8Q80Y20 664 aa7.71□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms