Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm25239-201ENSMUST00000174915 86 ntBASIC41.49■■■■■ 4.23
TraipQ8VIG6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
TraipQ8VIG6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
TraipQ8VIG6 Gm15042-201ENSMUST00000120212 883 ntBASIC36.35■■■■□ 3.41
TraipQ8VIG6 Gm24109-201ENSMUST00000175489 103 ntBASIC35.93■■■■□ 3.34
TraipQ8VIG6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
TraipQ8VIG6 Gm15045-201ENSMUST00000117359 883 ntBASIC35.58■■■■□ 3.29
TraipQ8VIG6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
TraipQ8VIG6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
TraipQ8VIG6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
TraipQ8VIG6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
TraipQ8VIG6 Gm23366-201ENSMUST00000175022 89 ntBASIC34.71■■■■□ 3.15
TraipQ8VIG6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
TraipQ8VIG6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
TraipQ8VIG6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
TraipQ8VIG6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
TraipQ8VIG6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.69■■■□□ 2.98
TraipQ8VIG6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.61■■■□□ 2.97
TraipQ8VIG6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
TraipQ8VIG6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
TraipQ8VIG6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.38■■■□□ 2.93
TraipQ8VIG6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
TraipQ8VIG6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
TraipQ8VIG6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.18■■■□□ 2.9
TraipQ8VIG6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
TraipQ8VIG6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.08■■■□□ 2.89
TraipQ8VIG6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.89
TraipQ8VIG6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.04■■■□□ 2.88
TraipQ8VIG6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
TraipQ8VIG6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
TraipQ8VIG6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
TraipQ8VIG6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TraipQ8VIG6 Psd-208ENSMUST00000224556 2034 ntBASIC32.85■■■□□ 2.85
TraipQ8VIG6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.76■■■□□ 2.83
TraipQ8VIG6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
TraipQ8VIG6 Gm25238-201ENSMUST00000174914 89 ntBASIC32.72■■■□□ 2.83
TraipQ8VIG6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TraipQ8VIG6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.46■■■□□ 2.79
TraipQ8VIG6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
TraipQ8VIG6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TraipQ8VIG6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TraipQ8VIG6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
TraipQ8VIG6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.02■■■□□ 2.72
TraipQ8VIG6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TraipQ8VIG6 Gm27325-201ENSMUST00000175467 74 ntBASIC31.92■■■□□ 2.7
TraipQ8VIG6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.92■■■□□ 2.7
TraipQ8VIG6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.89■■■□□ 2.7
TraipQ8VIG6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TraipQ8VIG6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
TraipQ8VIG6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TraipQ8VIG6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.63■■■□□ 2.65
TraipQ8VIG6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TraipQ8VIG6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
TraipQ8VIG6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.48■■■□□ 2.63
TraipQ8VIG6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.44■■■□□ 2.62
TraipQ8VIG6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TraipQ8VIG6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TraipQ8VIG6 Gm25262-201ENSMUST00000174934 133 ntBASIC31.33■■■□□ 2.61
TraipQ8VIG6 Rab21-202ENSMUST00000218831 843 ntBASIC31.29■■■□□ 2.6
TraipQ8VIG6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
TraipQ8VIG6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TraipQ8VIG6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TraipQ8VIG6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TraipQ8VIG6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.17■■■□□ 2.58
TraipQ8VIG6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TraipQ8VIG6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TraipQ8VIG6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TraipQ8VIG6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TraipQ8VIG6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
TraipQ8VIG6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.02■■■□□ 2.56
TraipQ8VIG6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
TraipQ8VIG6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TraipQ8VIG6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.95■■■□□ 2.55
TraipQ8VIG6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.93■■■□□ 2.54
TraipQ8VIG6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
TraipQ8VIG6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TraipQ8VIG6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
TraipQ8VIG6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TraipQ8VIG6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
TraipQ8VIG6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
TraipQ8VIG6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.76■■■□□ 2.51
TraipQ8VIG6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TraipQ8VIG6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.66■■■□□ 2.5
TraipQ8VIG6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
TraipQ8VIG6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TraipQ8VIG6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.63■■■□□ 2.49
TraipQ8VIG6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.59■■■□□ 2.49
TraipQ8VIG6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TraipQ8VIG6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TraipQ8VIG6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.54■■■□□ 2.48
TraipQ8VIG6 Gm26115-201ENSMUST00000175605 87 ntBASIC30.51■■■□□ 2.47
TraipQ8VIG6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TraipQ8VIG6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
TraipQ8VIG6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TraipQ8VIG6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TraipQ8VIG6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.44■■■□□ 2.46
TraipQ8VIG6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TraipQ8VIG6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TraipQ8VIG6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.36■■■□□ 2.45
TraipQ8VIG6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms