RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Polr1aO35134 1717 aaKnown RBP16.86■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Washc2Q6PGL7 1334 aa16.85■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Nolc1E9Q5C9 702 aaKnown RBP16.84■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Ak9G3UYQ4 1894 aa16.84■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Fhad1A6PWD2 1420 aa16.83■□□□□ 0.29
Ufd1-201ENSMUST00000005394 WrnO09053 1401 aa16.83■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Abca5Q8K448 1642 aa16.83■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Ncoa2Q61026 1462 aa16.82■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Amer1Q7TS75 1132 aa16.82■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Cux1P53564 1515 aa16.8■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Smg6P61406 1418 aaKnown RBP16.79■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Mia2Q91ZV0 1396 aa16.79■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Ankrd26Q811D2 1581 aa16.78■□□□□ 0.28
Ufd1-201ENSMUST00000005394 NclP09405 707 aaKnown RBP16.78■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Supt16hQ920B9 1047 aa16.78■□□□□ 0.28
Ufd1-201ENSMUST00000005394 Vps8Q0P5W1 1427 aa16.76■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Arid3cA6PWV5 409 aa16.75■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Peg3Q3URU2 1571 aa16.74■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Fyco1Q8VDC1 1437 aa16.74■□□□□ 0.27
Ufd1-201ENSMUST00000005394 BlmO88700 1416 aa16.73■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Igf1rQ60751 1373 aa16.73■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Lmo7E9PYF4 1699 aaKnown RBP16.73■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Rrbp1Q99PL5 1605 aaKnown RBP16.73■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Pcf11G3X9Z4 1553 aa16.72■□□□□ 0.27
Ufd1-201ENSMUST00000005394 CntlnA2AM05 1397 aa16.71■□□□□ 0.27
Ufd1-201ENSMUST00000005394 Clasp1Q80TV8 1535 aaKnown RBP16.69■□□□□ 0.26
Ufd1-201ENSMUST00000005394 3425401B19RikD3Z1D3 1412 aa16.69■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Lrrc9Q8CDN9 1456 aa16.68■□□□□ 0.26
Ufd1-201ENSMUST00000005394 PrkcshO08795 521 aa16.68■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Cul7Q8VE73 1689 aa16.67■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Arhgap31A6X8Z5 1425 aa16.67■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Naip5Q9R016 1403 aa16.66■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Fhod3Q76LL6 1578 aa16.66■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Znf608Q56A10 1511 aa16.66■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Wdr43Q6ZQL4 677 aaKnown RBP16.65■□□□□ 0.26
Ufd1-201ENSMUST00000005394 Ttc37F8VPK0 1563 aa16.63■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Naip2Q9QUK4 1447 aa16.63■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Wdr7Q920I9 1489 aa16.62■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Hspa5P20029 655 aaKnown RBP16.62■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Ccdc141E9Q8Q6 1531 aa16.62■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Depdc5P61460 1591 aa16.61■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Mapkbp1Q6NS57 1503 aa16.6■□□□□ 0.25
Ufd1-201ENSMUST00000005394 AdgbG3UZ78 1657 aa16.59■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Aebp1Q640N1 1128 aa16.59■□□□□ 0.25
Ufd1-201ENSMUST00000005394 NhsB1AV60 1647 aa16.58■□□□□ 0.25
Ufd1-201ENSMUST00000005394 Atp10dQ8K2X1 1416 aa16.57■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Ppp4r2Q0VGB7 417 aa16.57■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Zfyve16Q80U44 1528 aa16.56■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Ccdc9Q8VC31 543 aaKnown RBP16.56■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Fam50aQ9WV03 339 aaKnown RBP16.55■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Kif27Q7M6Z4 1394 aa16.53■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Liat1Q810M6 228 aa16.53■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Mroh2aD3Z750 1679 aa16.53■□□□□ 0.24
Ufd1-201ENSMUST00000005394 Rapgef6Q5NCJ1 1609 aa16.51■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Ccdc27Q3V036 639 aa16.51■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Dennd4bQ3U1Y4 1499 aa16.5■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Gcc2Q8CHG3 1679 aa16.5■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Ncoa1P70365 1447 aa16.49■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Gm13695A2AK44 830 aa16.49■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Plppr3Q7TPB0 716 aa16.49■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Fndc1E9Q043 1732 aa16.49■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Fancd2Q80V62 1450 aa16.48■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Gm1043A0A140LJC2 1431 aa16.47■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Arhgef11Q68FM7 1552 aa16.47■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Egfem1Q8C088 590 aa16.47■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Upf2A2AT37 1269 aaKnown RBP16.46■□□□□ 0.23
Ufd1-201ENSMUST00000005394 Magi1Q6RHR9 1471 aa16.45■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Sin3aQ60520 1274 aaKnown RBP16.44■□□□□ 0.22
Ufd1-201ENSMUST00000005394 AglF8VPN4 1532 aa16.44■□□□□ 0.22
Ufd1-201ENSMUST00000005394 A2mQ6GQT1 1474 aa16.44■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Kiaa1210E9Q0C6 1637 aa16.43■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Abca8bQ8K440 1620 aa16.43■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Slc4a2P13808 1237 aaKnown RBP16.41■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Pak3Q61036 559 aa16.41■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Lmtk2Q3TYD6 1471 aa16.41■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Ipo9Q91YE6 1041 aa16.4■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Dnajc5gQ8C632 165 aa16.4■□□□□ 0.22
Ufd1-201ENSMUST00000005394 Prex2Q3LAC4 1598 aa16.39■□□□□ 0.21
Ufd1-201ENSMUST00000005394 PnisrA2AJT4 805 aaKnown RBP16.38■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Hdac5Q9Z2V6 1113 aa16.38■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Ncoa3O09000 1398 aa16.38■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Fam163aQ8CAA5 168 aa16.37■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Mink1Q9JM52 1308 aa16.37■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Rfx7F8VPJ6 1459 aa16.37■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Mrs2Q5NCE8 434 aa16.37■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Alpk3Q924C5 1678 aa16.34■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Mug1P28665 1476 aa16.33■□□□□ 0.21
Ufd1-201ENSMUST00000005394 Lmod2Q3UHZ5 550 aa16.33■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Tcerg1Q8CGF7 1100 aaKnown RBP16.33■□□□□ 0.2
Ufd1-201ENSMUST00000005394 NrdcQ8BHG1 1161 aa16.32■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Dhx57Q6P5D3 1388 aaKnown RBP16.32■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Slc24a1Q91WD8 1130 aa16.31■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Mlh3A0A1Y7VMP7 1443 aa16.31■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Rprd2Q6NXI6 1469 aaKnown RBP16.31■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Eif5bQ05D44 1216 aaKnown RBP16.3■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Rnf17Q99MV7 1640 aa16.29■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Plekhg5Q66T02 1073 aa16.28■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Mphosph9A6H5Y1 991 aa16.27■□□□□ 0.2
Ufd1-201ENSMUST00000005394 Exoc6Q8R313 802 aa16.27■□□□□ 0.2
Ufd1-201ENSMUST00000005394 MlecQ6ZQI3 291 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 150.1 ms