RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Slc4a3P16283 1227 aa11.7□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 U2surpQ6NV83 1029 aaKnown RBP11.7□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Rpap1Q80TE0 1409 aa11.7□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Arhgap35Q91YM2 1499 aa11.7□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Pds5bQ4VA53 1446 aaKnown RBP11.7□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Aebp1Q640N1 1128 aa11.69□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Stk26Q99JT2 416 aa11.69□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 AknaQ80VW7 1404 aa11.69□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Exoc6Q8R313 802 aa11.69□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Tcerg1Q8CGF7 1100 aaKnown RBP11.68□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Ccdc88bQ4QRL3 1481 aa11.68□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Eif4g2Q62448 906 aaKnown RBP11.68□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Supt16hQ920B9 1047 aa11.68□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Sart3Q9JLI8 962 aaKnown RBP11.68□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Rassf8Q8CJ96 419 aa11.67□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Trak1Q6PD31 939 aa11.67□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Mphosph9A6H5Y1 991 aa11.66□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Plin1Q8CGN5 517 aa11.66□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 U2af1Q9D883 239 aaKnown RBP11.65□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Sin3aQ60520 1274 aaKnown RBP11.65□□□□□ -0.54
Pdgfra-201ENSMUST00000000476 Arid3cA6PWV5 409 aa11.65□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Zscan21Q07231 555 aa11.65□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Chmp5Q9D7S9 219 aa11.65□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 EspnQ9ET47 871 aa11.64□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Rock2P70336 1388 aa11.64□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 PtmsQ9D0J8 101 aaKnown RBP11.64□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Mak16Q8BGS0 296 aaKnown RBP11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Golga2Q921M4 999 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Cabp1Q9JLK7 227 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Lemd3Q9WU40 921 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 CntlnA2AM05 1397 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Anapc15P60007 132 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Erich6bQ9D4S6 220 aa11.63□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Psme1P97371 249 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Tmco5bQ80X59 307 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Dnai1Q8C0M8 701 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Dcaf11Q91VU6 549 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Baz1bQ9Z277 1479 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Birc3O08863 600 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Pcmtd1P59913 357 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Gm973E9Q295 1059 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Ecm2Q5FW85 670 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Pde3bQ61409 1100 aa11.62□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Q3TQI7 289 aaKnown RBP11.61□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Dnttip2Q8R2M2 758 aaKnown RBP11.61□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Dhx57Q6P5D3 1388 aaKnown RBP11.61□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Tnnt1O88346 262 aa11.6□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Nup155Q99P88 1391 aaKnown RBP11.6□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Irx3P81067 507 aa11.6□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Nol10Q5RJG1 687 aaKnown RBP11.6□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Spag9Q58A65 1321 aaKnown RBP11.59□□□□□ -0.55
Pdgfra-201ENSMUST00000000476 Plekhh2Q8C115 1491 aa11.58□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Cluap1Q8R3P7 413 aa11.58□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Znf330Q922H9 316 aa11.58□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Sox12Q04890 314 aa11.58□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Iffo2Q8R2V2 512 aa11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Ggt6Q6PDE7 497 aa11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Ipo8Q7TMY7 1010 aa11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Mfap1aC0HKD8 439 aaKnown RBP11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Mfap1bC0HKD9 439 aaKnown RBP11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Txndc2Q6P902 515 aa11.57□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Ipo9Q91YE6 1041 aa11.56□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 AU015836B2RUM3 263 aa11.56□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Srcin1Q9QWI6 1250 aa11.55□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 MecomP14404 1042 aa11.55□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 CrbnQ8C7D2 445 aa11.55□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Znf316Q6PGE4 1016 aa11.55□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Kif3bQ61771 747 aa11.54□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 CgnP59242 1191 aa11.54□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Ccar1Q8CH18 1146 aaKnown RBP11.54□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Q8BT18 775 aa11.53□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Cux2P70298 1426 aa11.53□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 R3hcc1Q8BSI6 488 aa11.53□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Smarce1O54941 411 aaKnown RBP11.52□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Calcoco2A2A6M5 331 aa11.52□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 Ksr2Q3UVC0 959 aa11.52□□□□□ -0.56
Pdgfra-201ENSMUST00000000476 CenpjQ569L8 1344 aa11.52□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Tpm3-rs7D3Z2H9 248 aa11.52□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Dnai2A2AC93 623 aa11.51□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Slc4a1apE9PX68 744 aa11.51□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 HdgfP51859 237 aaKnown RBP11.51□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Senp3Q9EP97 568 aaKnown RBP11.51□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Carmil1Q6EDY6 1374 aa11.5□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Stard8Q8K031 1019 aa11.5□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 MsnP26041 577 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Tnnt2P50752 301 aa11.5□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 GorabQ8BRM2 368 aa11.5□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Brpf1B2RRD7 1212 aa11.49□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Rsph4aQ8BYM7 716 aa11.48□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Chmp3Q9CQ10 224 aa11.48□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Ccnb3Q810T2 1396 aa11.48□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Pibf1E9Q6K3 756 aa11.48□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Fan1Q69ZT1 1020 aa11.48□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Bcl11aQ9QYE3 773 aa11.47□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Sycp2Q9CUU3 1500 aa11.47□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 Cald1E9QA15 768 aaKnown RBP11.47□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 MlecQ6ZQI3 291 aaKnown RBP11.47□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 UacaQ8CGB3 1411 aa11.46□□□□□ -0.57
Pdgfra-201ENSMUST00000000476 CftrP26361 1476 aa11.45□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 RdxP26043 583 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms