RNA–Protein interactions for RNA: YKL123W

YKL123W, Transcript of Dubious open reading frame, yeast

Gene YKL123W, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL123W	YKL123W	PEP4	P07267	405 aa	Known RBP	3.33	□□□□□ -1.88
YKL123W	YKL123W	RPL19A	P0CX82	189 aa	Known RBP	3.33	□□□□□ -1.88
YKL123W	YKL123W	RPL19B	P0CX83	189 aa	Predicted RBP	3.33	□□□□□ -1.88
YKL123W	YKL123W	PRE5	P40302	234 aa	Known RBP	3.33	□□□□□ -1.88
YKL123W	YKL123W	RBG2	P53295	368 aa	Known RBP	3.33	□□□□□ -1.88
YKL123W	YKL123W	IRC15	Q02733	499 aa		3.33	□□□□□ -1.88
YKL123W	YKL123W	VPS74	Q06385	345 aa		3.33	□□□□□ -1.88
YKL123W	YKL123W	SPE4	Q12455	300 aa		3.33	□□□□□ -1.88
YKL123W	YKL123W	LPD1	P09624	499 aa	Known RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	PWP2	P25635	923 aa	Known RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	RFS1	P38234	210 aa	Known RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	HEL2	Q05580	639 aa	Known RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	BSC6	Q08280	497 aa		3.32	□□□□□ -1.88
YKL123W	YKL123W	SSP2	Q08646	371 aa		3.32	□□□□□ -1.88
YKL123W	YKL123W	FMP40	Q08968	688 aa	Predicted RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	RRP12	Q12754	1228 aa	Known RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	HSH49	Q99181	213 aa	Predicted RBP	3.32	□□□□□ -1.88
YKL123W	YKL123W	FUN19	P28003	413 aa	Predicted RBP	3.31	□□□□□ -1.88
YKL123W	YKL123W	UTR4	P32626	227 aa		3.31	□□□□□ -1.88
YKL123W	YKL123W	PHO92	Q06390	306 aa		3.31	□□□□□ -1.88
YKL123W	YKL123W	SGS1	P35187	1447 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	SPT15	P13393	240 aa	Known RBP	3.3	□□□□□ -1.88
YKL123W	YKL123W	EXO70	P19658	623 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	YEL045C	P32616	141 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	UBP11	P36026	717 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	FUI1	P38196	639 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	GWT1	P47026	490 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	YKU80	Q04437	629 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	YOR387C	Q08910	206 aa		3.3	□□□□□ -1.88
YKL123W	YKL123W	MRP13	P12686	339 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	ART10	P18634	518 aa	Known RBP	3.29	□□□□□ -1.88
YKL123W	YKL123W	POL4	P25615	582 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	CHS3	P29465	1165 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	RRT2	P38332	387 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	CCT6	P39079	546 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	AFG3	P39925	761 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	TIF4631	P39935	952 aa	Known RBP	3.29	□□□□□ -1.88
YKL123W	YKL123W	ELP2	P42935	788 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	ALK1	P43633	760 aa	Known RBP	3.29	□□□□□ -1.88
YKL123W	YKL123W	GPI1	P53306	609 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	COQ9	Q05779	260 aa		3.29	□□□□□ -1.88
YKL123W	YKL123W	CPR1	P14832	162 aa	Known RBP	3.28	□□□□□ -1.88
YKL123W	YKL123W	YCK1	P23291	538 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	SHP1	P34223	423 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	DUG2	P38149	878 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	LCL3	P53153	274 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	BTN2	P53286	410 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	RBS1	Q05672	457 aa	Known RBP	3.28	□□□□□ -1.88
YKL123W	YKL123W	THP1	Q08231	455 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	CFT2	Q12102	859 aa	Predicted RBP	3.28	□□□□□ -1.88
YKL123W	YKL123W	ERV2	Q12284	196 aa		3.28	□□□□□ -1.88
YKL123W	YKL123W	NAM9	P27929	486 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	YIM1	P28625	365 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	YME1	P32795	747 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	MSN2	P33748	704 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	BNA4	P38169	460 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	YBL029W	P38201	376 aa		3.27	□□□□□ -1.89
YKL123W	YKL123W	KEL3	Q08979	651 aa	Predicted RBP	3.27	□□□□□ -1.89
YKL123W	YKL123W	HIP1	P06775	603 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	ELO2	P25358	347 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	DEG1	P31115	442 aa	Known RBP	3.26	□□□□□ -1.89
YKL123W	YKL123W	YBL059W	P34224	193 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	TCM62	P38228	572 aa	Known RBP	3.26	□□□□□ -1.89
YKL123W	YKL123W	FAU1	P40099	211 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	LYS14	P40971	790 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	YGR210C	P42942	411 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	AIM22	P47051	409 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	TOF2	Q02208	771 aa		3.26	□□□□□ -1.89
YKL123W	YKL123W	NOP58	Q12499	511 aa	Known RBP	3.26	□□□□□ -1.89
YKL123W	YKL123W	HEM15	P16622	393 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	ISY1	P21374	235 aa	Predicted RBP	3.25	□□□□□ -1.89
YKL123W	YKL123W	MRP4	P32902	394 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	PTH1	P38876	190 aa	Known RBP	3.25	□□□□□ -1.89
YKL123W	YKL123W	YIL067C	P40514	678 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	SDT1	P53078	280 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	MEP3	P53390	489 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	ELP3	Q02908	557 aa	Known RBP	3.25	□□□□□ -1.89
YKL123W	YKL123W	NGL3	Q03210	505 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	PAL1	Q05518	499 aa	Known RBP	3.25	□□□□□ -1.89
YKL123W	YKL123W	OPY2	Q06810	360 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	TMS1	Q12116	473 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	YBR126W-A	Q8TGU7	68 aa		3.25	□□□□□ -1.89
YKL123W	YKL123W	HHF1	P02309	103 aa	Known RBP	3.24	□□□□□ -1.89
YKL123W	YKL123W	GLK1	P17709	500 aa	Known RBP	3.24	□□□□□ -1.89
YKL123W	YKL123W	HXT1	P32465	570 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
YKL123W	YKL123W	SEF1	P34228	1148 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	NDT80	P38830	627 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	MTC6	P38849	526 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	GCD10	P41814	478 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	VID30	P53076	958 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	DUO1	P53168	247 aa	Known RBP	3.24	□□□□□ -1.89
YKL123W	YKL123W	CAF40	P53829	373 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	IPI3	P53877	555 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	ARK1	P53974	638 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	HEF3	P53978	1044 aa	Known RBP	3.24	□□□□□ -1.89
YKL123W	YKL123W	PIR3	Q03180	325 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	RRN11	Q04712	507 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	PBA1	Q05778	276 aa		3.24	□□□□□ -1.89
YKL123W	YKL123W	RKM5	Q12367	367 aa		3.24	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms