RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	IDH2	P28241	369 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	MGM1	P32266	881 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	RPS0A	P32905	252 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	OCT1	P35999	772 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	TUL1	P36096	758 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	THI2	P38141	450 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	YIL166C	P40445	542 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	BTN2	P53286	410 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	ASI1	P54074	624 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	RSM23	Q01163	450 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	ADE13	Q05911	482 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	PDR8	Q06149	701 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	PIG1	Q06216	648 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	CDC45	Q08032	650 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	PGC1	Q08959	321 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	PUT2	P07275	575 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	KRR1	P25586	316 aa	Predicted RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	MTR2	P34232	184 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	MIA40	P36046	403 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	APD1	P38281	316 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	RRT2	P38332	387 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	EFM4	P40516	257 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	NET1	P47035	1189 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	LYS20	P48570	428 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	CUL3	P53202	744 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	APM1	Q00776	475 aa	Predicted RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	TOF2	Q02208	771 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	FMP30	Q02883	468 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	SNU56	Q03782	492 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	YMR160W	Q03823	816 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	BSP1	Q06604	576 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	MCH4	Q08268	501 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	SMF3	Q12078	473 aa	Predicted RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	CTF3	Q12748	733 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	NUP1	P20676	1076 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	SPO11	P23179	398 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	ARN1	P38731	627 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	AIM22	P47051	409 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	YGR111W	P53265	400 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	ATG26	Q06321	1198 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	FRE3	Q08905	711 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	YLR111W	Q12528	110 aa		4.13	□□□□□ -1.75
TDA3	YHR009C	PRP2	P20095	876 aa	Predicted RBP	4.12	□□□□□ -1.75
TDA3	YHR009C	GAC1	P28006	793 aa		4.12	□□□□□ -1.75
TDA3	YHR009C	YGR126W	P53274	230 aa		4.12	□□□□□ -1.75
TDA3	YHR009C	EAF7	P53911	425 aa	Known RBP	4.12	□□□□□ -1.75
TDA3	YHR009C	RSF1	Q05043	376 aa		4.12	□□□□□ -1.75
TDA3	YHR009C	MMR1	Q06324	491 aa		4.12	□□□□□ -1.75
TDA3	YHR009C	SIL1	Q08199	421 aa		4.12	□□□□□ -1.75
TDA3	YHR009C	NCE102	Q12207	173 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
TDA3	YHR009C	RPN5	Q12250	445 aa	Known RBP	4.12	□□□□□ -1.75
TDA3	YHR009C	INO80	P53115	1489 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	PEP4	P07267	405 aa	Known RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	SPB1	P25582	841 aa	Predicted RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	YIM1	P28625	365 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	NIP100	P33420	868 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	PIM1	P36775	1133 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	SLM4	P38247	162 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	UBA4	P38820	440 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	ATG27	P46989	271 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	PYK2	P52489	506 aa	Known RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	YNL144C	P53907	740 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	HEL2	Q05580	639 aa	Known RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	RRP45	Q05636	305 aa	Known RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	TPO3	Q06451	622 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	SLK19	Q08581	821 aa	Known RBP	4.11	□□□□□ -1.75
TDA3	YHR009C	PNS1	Q12412	539 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	FRE6	Q12473	712 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	SKS1	Q12505	502 aa		4.11	□□□□□ -1.75
TDA3	YHR009C	HIP1	P06775	603 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	CBP1	P07252	654 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	COR1	P07256	457 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	ADY2	P25613	283 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	LTV1	P34078	463 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	HEL1	P36113	551 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	NTC20	P38302	140 aa	Predicted RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	YHR054C	P38780	354 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	VPS41	P38959	992 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	MBB1	P39534	108 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	ULP2	P40537	1034 aa	Predicted RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	ALK1	P43633	760 aa	Known RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	TAX4	P47030	604 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	COS5	P47187	383 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	YGR149W	P48236	432 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	YGL138C	P53122	345 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	SLG1	P54867	378 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	SKO1	Q02100	647 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	YDL057W	Q07379	328 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	COS7	Q07788	383 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	CUE5	Q08412	411 aa	Known RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	DCI1	Q08558	271 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	UAF30	Q08747	228 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	NFI1	Q12216	726 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	SNF3	P10870	884 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	SUI2	P20459	304 aa	Known RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	RAD14	P28519	371 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	RPN2	P32565	945 aa	Known RBP	4.1	□□□□□ -1.75
TDA3	YHR009C	HOT13	P36078	116 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	URB2	P47108	1174 aa		4.1	□□□□□ -1.75
TDA3	YHR009C	FMS1	P50264	508 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 223.6 ms