RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C DRS1P32892 752 aaKnown RBP11.29□□□□□ -0.6
TDA3YHR009C MTC1P47018 478 aaKnown RBP11.22□□□□□ -0.61
TDA3YHR009C BFR2Q06631 534 aaKnown RBP10□□□□□ -0.81
TDA3YHR009C FAP1P53971 965 aa9.93□□□□□ -0.82
TDA3YHR009C TFA1P36100 482 aa9.8□□□□□ -0.84
TDA3YHR009C AVT3P36062 692 aa9.47□□□□□ -0.89
TDA3YHR009C DIP2Q12220 943 aaPredicted RBP9.45□□□□□ -0.9
TDA3YHR009C PRI1P10363 409 aa9.34□□□□□ -0.91
TDA3YHR009C ISW2Q08773 1120 aa9.31□□□□□ -0.92
TDA3YHR009C PRY3P47033 881 aa9.29□□□□□ -0.92
TDA3YHR009C AAD16Q02895 342 aa9.28□□□□□ -0.92
TDA3YHR009C RPG1P38249 964 aaKnown RBP9.17□□□□□ -0.94
TDA3YHR009C RSE1Q04693 1361 aaKnown RBP8.96□□□□□ -0.98
TDA3YHR009C TSR3Q12094 313 aaKnown RBP8.84□□□□□ -0.99
TDA3YHR009C RQC2Q12532 1038 aaKnown RBP8.82□□□□□ -1
TDA3YHR009C HAA1Q12753 694 aaKnown RBP8.74□□□□□ -1.01
TDA3YHR009C YCK3P39962 524 aa8.65□□□□□ -1.02
TDA3YHR009C RPL17AP05740 184 aaKnown RBP8.65□□□□□ -1.03
TDA3YHR009C RPL17BP46990 184 aaKnown RBP8.65□□□□□ -1.03
TDA3YHR009C REB1P21538 810 aa8.63□□□□□ -1.03
TDA3YHR009C MRPL32P25348 183 aa8.55□□□□□ -1.04
TDA3YHR009C DMA1P38823 416 aa8.27□□□□□ -1.09
TDA3YHR009C SPT21P35209 758 aa8.22□□□□□ -1.09
TDA3YHR009C PTP3P40048 928 aa8.19□□□□□ -1.1
TDA3YHR009C RIM101P33400 625 aa8.16□□□□□ -1.1
TDA3YHR009C YGL015CP33199 130 aa8.14□□□□□ -1.11
TDA3YHR009C YKR023WP36119 530 aaKnown RBP8.1□□□□□ -1.11
TDA3YHR009C CDC27P38042 758 aa8.07□□□□□ -1.12
TDA3YHR009C SSP1P38871 571 aa8.02□□□□□ -1.13
TDA3YHR009C HOP09932 586 aa7.96□□□□□ -1.14
TDA3YHR009C TFC8Q12308 588 aa7.96□□□□□ -1.14
TDA3YHR009C TAF7Q05021 590 aa7.95□□□□□ -1.14
TDA3YHR009C OXP1P28273 1286 aa7.93□□□□□ -1.14
TDA3YHR009C DCD1P06773 312 aa7.9□□□□□ -1.14
TDA3YHR009C UBP10P53874 792 aaPredicted RBP7.88□□□□□ -1.15
TDA3YHR009C YAH1Q12184 172 aaKnown RBP7.85□□□□□ -1.15
TDA3YHR009C MAP2P38174 421 aaKnown RBP7.82□□□□□ -1.16
TDA3YHR009C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
TDA3YHR009C LEO1P38439 464 aa7.8□□□□□ -1.16
TDA3YHR009C YLR271WQ06152 274 aa7.79□□□□□ -1.16
TDA3YHR009C YIL055CP40523 627 aaKnown RBP7.78□□□□□ -1.16
TDA3YHR009C SCY1P53009 804 aa7.72□□□□□ -1.17
TDA3YHR009C BCH2P36122 765 aa7.7□□□□□ -1.18
TDA3YHR009C MGA2P40578 1113 aa7.68□□□□□ -1.18
TDA3YHR009C SAS10Q12136 610 aaPredicted RBP7.67□□□□□ -1.18
TDA3YHR009C RSM7P47150 247 aa7.67□□□□□ -1.18
TDA3YHR009C SLX5P32828 619 aaKnown RBP7.63□□□□□ -1.19
TDA3YHR009C LEU3P08638 886 aa7.6□□□□□ -1.19
TDA3YHR009C TIF4632P39936 914 aaKnown RBP7.6□□□□□ -1.19
TDA3YHR009C CST9Q06032 482 aa7.59□□□□□ -1.2
TDA3YHR009C EPS1P40557 701 aa7.54□□□□□ -1.2
TDA3YHR009C PSD2P53037 1138 aaKnown RBP7.53□□□□□ -1.2
TDA3YHR009C TGL3P40308 642 aa7.52□□□□□ -1.21
TDA3YHR009C BBC1P47068 1157 aa7.5□□□□□ -1.21
TDA3YHR009C AI2P03876 854 aa7.5□□□□□ -1.21
TDA3YHR009C BDF1P35817 686 aa7.49□□□□□ -1.21
TDA3YHR009C RAM2P29703 316 aa7.38□□□□□ -1.23
TDA3YHR009C RPN1P38764 993 aaKnown RBP7.36□□□□□ -1.23
TDA3YHR009C BUD31P25337 157 aaPredicted RBP7.33□□□□□ -1.24
TDA3YHR009C SET1P38827 1080 aaKnown RBP7.33□□□□□ -1.24
TDA3YHR009C MRM1P25270 412 aa7.29□□□□□ -1.24
TDA3YHR009C YPR148CQ06523 435 aa7.29□□□□□ -1.24
TDA3YHR009C RCR1P38212 213 aa7.29□□□□□ -1.24
TDA3YHR009C UBP9P39967 754 aa7.29□□□□□ -1.24
TDA3YHR009C CKB1P43639 278 aa7.29□□□□□ -1.24
TDA3YHR009C SPB4P25808 606 aaPredicted RBP7.28□□□□□ -1.24
TDA3YHR009C VPS70P47161 811 aa7.27□□□□□ -1.25
TDA3YHR009C DMA2P53924 522 aa7.27□□□□□ -1.25
TDA3YHR009C IFH1P39520 1085 aa7.25□□□□□ -1.25
TDA3YHR009C NSR1P27476 414 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
TDA3YHR009C YOR238WQ08634 303 aa7.24□□□□□ -1.25
TDA3YHR009C RTG3P38165 486 aa7.23□□□□□ -1.25
TDA3YHR009C YAP5P40574 245 aa7.21□□□□□ -1.25
TDA3YHR009C MAK11P20484 414 aaKnown RBP7.2□□□□□ -1.26
TDA3YHR009C MST1P07236 462 aa7.19□□□□□ -1.26
TDA3YHR009C DSF2P38213 736 aa7.15□□□□□ -1.27
TDA3YHR009C VPS29P38759 282 aa7.12□□□□□ -1.27
TDA3YHR009C PBS2P08018 668 aa7.12□□□□□ -1.27
TDA3YHR009C COQ8P27697 501 aa7.11□□□□□ -1.27
TDA3YHR009C ABP1P15891 592 aaKnown RBP7.08□□□□□ -1.28
TDA3YHR009C GTT3P39996 337 aa7.08□□□□□ -1.28
TDA3YHR009C YNR021WP53723 404 aaKnown RBP7.06□□□□□ -1.28
TDA3YHR009C NOP53Q12080 455 aaKnown RBP7.06□□□□□ -1.28
TDA3YHR009C RLF2Q12495 606 aa7.06□□□□□ -1.28
TDA3YHR009C YBL029C-AQ3E756 94 aa7.06□□□□□ -1.28
TDA3YHR009C SIS1P25294 352 aaKnown RBP7.05□□□□□ -1.28
TDA3YHR009C KIN1P13185 1064 aa7.04□□□□□ -1.28
TDA3YHR009C YMR1P47147 688 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
TDA3YHR009C PIB1Q06651 286 aa7.03□□□□□ -1.28
TDA3YHR009C WSC3Q12215 556 aa7.02□□□□□ -1.29
TDA3YHR009C MAM3Q12296 706 aa7.02□□□□□ -1.29
TDA3YHR009C MIF2P35201 549 aa7.01□□□□□ -1.29
TDA3YHR009C REF2P42073 533 aaPredicted RBP7.01□□□□□ -1.29
TDA3YHR009C EDS1P38073 919 aa7□□□□□ -1.29
TDA3YHR009C STS1P38637 319 aa7□□□□□ -1.29
TDA3YHR009C VNX1P42839 908 aa7□□□□□ -1.29
TDA3YHR009C GLC3P32775 704 aa6.99□□□□□ -1.29
TDA3YHR009C IES2P40154 320 aa6.99□□□□□ -1.29
TDA3YHR009C AIM7Q12156 149 aa6.99□□□□□ -1.29
TDA3YHR009C DBP1P24784 617 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms