RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A SWH1P35845 1188 aa2.52□□□□□ -2.01
YBR012W-AYBR012W-A SPG5P42933 373 aa2.52□□□□□ -2.01
YBR012W-AYBR012W-A ARC1P46672 376 aaKnown RBP2.52□□□□□ -2.01
YBR012W-AYBR012W-A PYK2P52489 506 aaKnown RBP2.52□□□□□ -2.01
YBR012W-AYBR012W-A GLO2Q05584 274 aa2.52□□□□□ -2.01
YBR012W-AYBR012W-A RTT109Q07794 436 aa2.52□□□□□ -2.01
YBR012W-AYBR012W-A ETT1Q08421 412 aaKnown RBP2.52□□□□□ -2.01
YBR012W-AYBR012W-A PRE8P23639 250 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A RPS2P25443 254 aaKnown RBP2.51□□□□□ -2.01
YBR012W-AYBR012W-A SYN8P31377 255 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A AGA1P32323 725 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A UBP11P36026 717 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A AFG3P39925 761 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A CSM2P40465 213 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A RPR2P40571 144 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A PTR3P43606 678 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A SMM1P53720 384 aaKnown RBP2.51□□□□□ -2.01
YBR012W-AYBR012W-A YVH1Q02256 364 aaKnown RBP2.51□□□□□ -2.01
YBR012W-AYBR012W-A DIC1Q06143 298 aa2.51□□□□□ -2.01
YBR012W-AYBR012W-A CAR1P00812 333 aaKnown RBP2.5□□□□□ -2.01
YBR012W-AYBR012W-A ARD1P07347 238 aaPredicted RBP2.5□□□□□ -2.01
YBR012W-AYBR012W-A CDC16P09798 840 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A RPL20AP0CX23 172 aaKnown RBP2.5□□□□□ -2.01
YBR012W-AYBR012W-A RPL20BP0CX24 172 aaPredicted RBP2.5□□□□□ -2.01
YBR012W-AYBR012W-A KAR3P17119 729 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A ADH7P25377 361 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A CHS3P29465 1165 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A AGP2P38090 596 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A MTC4P38335 694 aaKnown RBP2.5□□□□□ -2.01
YBR012W-AYBR012W-A NPR2P39923 615 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A IDP2P41939 412 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A DUG3P53871 357 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A RHO4Q00246 291 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A YPL014WQ02606 381 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A ADD37Q03233 198 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A YML037CQ03703 340 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A SPE4Q12455 300 aa2.5□□□□□ -2.01
YBR012W-AYBR012W-A RPL19AP0CX82 189 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A RPL19BP0CX83 189 aaPredicted RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A SGV1P23293 657 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A LDB16P25587 256 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A ATS1P31386 333 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A SAC6P32599 642 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A TIF3P34167 436 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A MTR2P34232 184 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A MRPL4P36517 319 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A YBL029WP38201 376 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A ICS2P38284 255 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A DUO1P53168 247 aaKnown RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A NGL3Q03210 505 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A RPC11Q04307 110 aaPredicted RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A YDL057WQ07379 328 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A LUC7Q07508 261 aaPredicted RBP2.49□□□□□ -2.01
YBR012W-AYBR012W-A YDR056CQ12025 205 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A HUA2Q12134 243 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A AYT1Q12226 474 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A ENT1Q12518 454 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A YBR126W-AQ8TGU7 68 aa2.49□□□□□ -2.01
YBR012W-AYBR012W-A EST1P17214 699 aaPredicted RBP2.48□□□□□ -2.01
YBR012W-AYBR012W-A IMG1P25626 169 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A DPB3P27344 201 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A YKL100CP34248 587 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A PCA1P38360 1216 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A TIF5P38431 405 aaKnown RBP2.48□□□□□ -2.01
YBR012W-AYBR012W-A FAA2P39518 744 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A YGR127WP53275 312 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A BUD32P53323 261 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A EFM6P53970 246 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A YMR087WQ04299 284 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A BUD22Q04347 519 aaKnown RBP2.48□□□□□ -2.01
YBR012W-AYBR012W-A OPY2Q06810 360 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A SGS1P35187 1447 aa2.48□□□□□ -2.01
YBR012W-AYBR012W-A MRP13P12686 339 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A PEP5P12868 1029 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A ATR1P13090 542 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A APE1P14904 514 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A AAC3P18238 307 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A BUD5P25300 642 aaPredicted RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A PUP3P25451 205 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A YBR144CP34215 104 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A YBL055CP34220 418 aaPredicted RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A TUL1P36096 758 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A YKL023WP36103 277 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A RPL32P38061 130 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A OSH3P38713 996 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A SNG1P46950 547 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A ALT2P52892 507 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A DSD1P53095 428 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A IPI3P53877 555 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A SHR3Q02774 210 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A SVL3Q03088 825 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A MSC1Q03104 513 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A YKU80Q04437 629 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A HEL2Q05580 639 aaKnown RBP2.47□□□□□ -2.01
YBR012W-AYBR012W-A YPL272CQ08984 517 aa2.47□□□□□ -2.01
YBR012W-AYBR012W-A MF(ALPHA)1P01149 165 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A BOS1P25385 244 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A YIH1P25637 258 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A VPS52P39904 641 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A SGN1P40561 250 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms