RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C PDA1P16387 420 aaKnown RBP3.42□□□□□ -1.86
PGD1YGL025C VMA16P23968 213 aa3.42□□□□□ -1.86
PGD1YGL025C ADH7P25377 361 aa3.42□□□□□ -1.86
PGD1YGL025C SNC1P31109 117 aa3.42□□□□□ -1.86
PGD1YGL025C ROT2P38138 954 aa3.42□□□□□ -1.86
PGD1YGL025C AXL1P40851 1208 aa3.42□□□□□ -1.86
PGD1YGL025C DIM1P41819 318 aaKnown RBP3.42□□□□□ -1.86
PGD1YGL025C MEP3P53390 489 aa3.42□□□□□ -1.86
PGD1YGL025C BSC5P53755 489 aa3.42□□□□□ -1.86
PGD1YGL025C TDA7P53882 636 aaPredicted RBP3.42□□□□□ -1.86
PGD1YGL025C RSM23Q01163 450 aa3.42□□□□□ -1.86
PGD1YGL025C YSA1Q01976 231 aa3.42□□□□□ -1.86
PGD1YGL025C DIC1Q06143 298 aa3.42□□□□□ -1.86
PGD1YGL025C ECM30Q06673 1274 aa3.42□□□□□ -1.86
PGD1YGL025C FMP45Q07651 309 aa3.42□□□□□ -1.86
PGD1YGL025C TEN1Q07921 160 aa3.42□□□□□ -1.86
PGD1YGL025C TCO89Q08921 799 aa3.42□□□□□ -1.86
PGD1YGL025C ARP6Q12509 438 aa3.42□□□□□ -1.86
PGD1YGL025C CDC24P11433 854 aaPredicted RBP3.41□□□□□ -1.86
PGD1YGL025C KGD1P20967 1014 aaKnown RBP3.41□□□□□ -1.86
PGD1YGL025C SGV1P23293 657 aaKnown RBP3.41□□□□□ -1.86
PGD1YGL025C MAL33P38157 468 aa3.41□□□□□ -1.86
PGD1YGL025C LAG1P38703 411 aa3.41□□□□□ -1.86
PGD1YGL025C RTS1P38903 757 aa3.41□□□□□ -1.86
PGD1YGL025C YJL068CP40363 299 aa3.41□□□□□ -1.86
PGD1YGL025C EFM6P53970 246 aa3.41□□□□□ -1.86
PGD1YGL025C YVH1Q02256 364 aaKnown RBP3.41□□□□□ -1.86
PGD1YGL025C MSS11Q03825 758 aa3.41□□□□□ -1.86
PGD1YGL025C RBA50Q04418 439 aa3.41□□□□□ -1.86
PGD1YGL025C YKU80Q04437 629 aa3.41□□□□□ -1.86
PGD1YGL025C PDH1Q12428 516 aaKnown RBP3.41□□□□□ -1.86
PGD1YGL025C KAR3P17119 729 aa3.4□□□□□ -1.87
PGD1YGL025C LOS1P33418 1100 aaPredicted RBP3.4□□□□□ -1.87
PGD1YGL025C AGP2P38090 596 aa3.4□□□□□ -1.87
PGD1YGL025C DHH1P39517 506 aaKnown RBP3.4□□□□□ -1.87
PGD1YGL025C GIS2P53849 153 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
PGD1YGL025C MSC1Q03104 513 aa3.4□□□□□ -1.87
PGD1YGL025C YMR087WQ04299 284 aa3.4□□□□□ -1.87
PGD1YGL025C DPB4Q04603 196 aaKnown RBP3.4□□□□□ -1.87
PGD1YGL025C HCR1Q05775 265 aaKnown RBP3.4□□□□□ -1.87
PGD1YGL025C SSK1Q07084 712 aa3.4□□□□□ -1.87
PGD1YGL025C YEH2Q07950 538 aa3.4□□□□□ -1.87
PGD1YGL025C THI20Q08224 551 aa3.4□□□□□ -1.87
PGD1YGL025C ETT1Q08421 412 aaKnown RBP3.4□□□□□ -1.87
PGD1YGL025C SKM1Q12469 655 aa3.4□□□□□ -1.87
PGD1YGL025C YBR298C-AQ8TGK4 73 aa3.4□□□□□ -1.87
PGD1YGL025C TYR1P20049 452 aa3.39□□□□□ -1.87
PGD1YGL025C BUD5P25300 642 aaPredicted RBP3.39□□□□□ -1.87
PGD1YGL025C PUP3P25451 205 aaKnown RBP3.39□□□□□ -1.87
PGD1YGL025C AUR1P36107 401 aaPredicted RBP3.39□□□□□ -1.87
PGD1YGL025C SAM50P53969 484 aa3.39□□□□□ -1.87
PGD1YGL025C YPL014WQ02606 381 aa3.39□□□□□ -1.87
PGD1YGL025C RPM2Q02773 1202 aa3.39□□□□□ -1.87
PGD1YGL025C SCW10Q04951 389 aa3.39□□□□□ -1.87
PGD1YGL025C OPY2Q06810 360 aa3.39□□□□□ -1.87
PGD1YGL025C SPE4Q12455 300 aa3.39□□□□□ -1.87
PGD1YGL025C ARD1P07347 238 aaPredicted RBP3.38□□□□□ -1.87
PGD1YGL025C MCM10P32354 571 aa3.38□□□□□ -1.87
PGD1YGL025C NUP133P36161 1157 aa3.38□□□□□ -1.87
PGD1YGL025C KRE9P39005 276 aa3.38□□□□□ -1.87
PGD1YGL025C LYS14P40971 790 aa3.38□□□□□ -1.87
PGD1YGL025C SMM1P53720 384 aaKnown RBP3.38□□□□□ -1.87
PGD1YGL025C YMR160WQ03823 816 aa3.38□□□□□ -1.87
PGD1YGL025C PRP16P15938 1071 aaPredicted RBP3.37□□□□□ -1.87
PGD1YGL025C YCK1P23291 538 aa3.37□□□□□ -1.87
PGD1YGL025C PRE8P23639 250 aa3.37□□□□□ -1.87
PGD1YGL025C CMK1P27466 446 aaKnown RBP3.37□□□□□ -1.87
PGD1YGL025C ATS1P31386 333 aa3.37□□□□□ -1.87
PGD1YGL025C YBL055CP34220 418 aaPredicted RBP3.37□□□□□ -1.87
PGD1YGL025C ECM15P35195 104 aa3.37□□□□□ -1.87
PGD1YGL025C YTA12P40341 825 aa3.37□□□□□ -1.87
PGD1YGL025C IKS1P47042 667 aa3.37□□□□□ -1.87
PGD1YGL025C APT1P49435 187 aaKnown RBP3.37□□□□□ -1.87
PGD1YGL025C RHO4Q00246 291 aa3.37□□□□□ -1.87
PGD1YGL025C NCE102Q12207 173 aaRIP-Chip data3.37□□□□□ -1.87not detected
PGD1YGL025C MF(ALPHA)1P01149 165 aa3.36□□□□□ -1.87
PGD1YGL025C RPL15AP05748 204 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C CDC16P09798 840 aa3.36□□□□□ -1.87
PGD1YGL025C BOS1P25385 244 aa3.36□□□□□ -1.87
PGD1YGL025C IMG1P25626 169 aa3.36□□□□□ -1.87
PGD1YGL025C DPB3P27344 201 aa3.36□□□□□ -1.87
PGD1YGL025C CHS3P29465 1165 aa3.36□□□□□ -1.87
PGD1YGL025C PRO3P32263 286 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C SSH4P32343 579 aa3.36□□□□□ -1.87
PGD1YGL025C SSE2P32590 693 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C VPS17P32913 551 aa3.36□□□□□ -1.87
PGD1YGL025C YKL100CP34248 587 aa3.36□□□□□ -1.87
PGD1YGL025C MUD2P36084 527 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C RRP3P38712 501 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C PTR3P43606 678 aa3.36□□□□□ -1.87
PGD1YGL025C FAR3P46671 204 aa3.36□□□□□ -1.87
PGD1YGL025C IMP4P53941 290 aaKnown RBP3.36□□□□□ -1.87
PGD1YGL025C YMR018WQ04364 514 aa3.36□□□□□ -1.87
PGD1YGL025C LUC7Q07508 261 aaPredicted RBP3.36□□□□□ -1.87
PGD1YGL025C POL4P25615 582 aa3.35□□□□□ -1.87
PGD1YGL025C YIH1P25637 258 aa3.35□□□□□ -1.87
PGD1YGL025C SIP2P34164 415 aaKnown RBP3.35□□□□□ -1.87
PGD1YGL025C YBR144CP34215 104 aa3.35□□□□□ -1.87
PGD1YGL025C RPL32P38061 130 aaKnown RBP3.35□□□□□ -1.87
PGD1YGL025C YEL068CP39977 110 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms