RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TRS65P32893 560 aa2.36□□□□□ -2.03
VPS52YDR484W YKL100CP34248 587 aa2.36□□□□□ -2.03
VPS52YDR484W NOP4P37838 685 aaKnown RBP2.36□□□□□ -2.03
VPS52YDR484W ROT2P38138 954 aa2.36□□□□□ -2.03
VPS52YDR484W ICS2P38284 255 aa2.36□□□□□ -2.03
VPS52YDR484W NOP16P40007 231 aaKnown RBP2.36□□□□□ -2.03
VPS52YDR484W YND1P40009 630 aa2.36□□□□□ -2.03
VPS52YDR484W YIR014WP40570 242 aa2.36□□□□□ -2.03
VPS52YDR484W LYS4P49367 693 aaPredicted RBP2.36□□□□□ -2.03
VPS52YDR484W DUO1P53168 247 aaKnown RBP2.36□□□□□ -2.03
VPS52YDR484W CUL3P53202 744 aa2.36□□□□□ -2.03
VPS52YDR484W YMR160WQ03823 816 aa2.36□□□□□ -2.03
VPS52YDR484W YKU80Q04437 629 aa2.36□□□□□ -2.03
VPS52YDR484W TOP1P04786 769 aa2.35□□□□□ -2.03
VPS52YDR484W SEC53P07283 254 aaKnown RBP2.35□□□□□ -2.03
VPS52YDR484W ARD1P07347 238 aaPredicted RBP2.35□□□□□ -2.03
VPS52YDR484W BUD5P25300 642 aaPredicted RBP2.35□□□□□ -2.03
VPS52YDR484W BOS1P25385 244 aa2.35□□□□□ -2.03
VPS52YDR484W PPZ1P26570 692 aa2.35□□□□□ -2.03
VPS52YDR484W CMK1P27466 446 aaKnown RBP2.35□□□□□ -2.03
VPS52YDR484W MCM4P30665 933 aaKnown RBP2.35□□□□□ -2.03
VPS52YDR484W SSE2P32590 693 aaKnown RBP2.35□□□□□ -2.03
VPS52YDR484W PHD1P36093 366 aa2.35□□□□□ -2.03
VPS52YDR484W LAG1P38703 411 aa2.35□□□□□ -2.03
VPS52YDR484W AFG3P39925 761 aa2.35□□□□□ -2.03
VPS52YDR484W FET5P43561 622 aa2.35□□□□□ -2.03
VPS52YDR484W PYK2P52489 506 aaKnown RBP2.35□□□□□ -2.03
VPS52YDR484W YGL082WP53155 381 aa2.35□□□□□ -2.03
VPS52YDR484W PKP2P53170 491 aa2.35□□□□□ -2.03
VPS52YDR484W RSM23Q01163 450 aa2.35□□□□□ -2.03
VPS52YDR484W YML037CQ03703 340 aa2.35□□□□□ -2.03
VPS52YDR484W SSK1Q07084 712 aa2.35□□□□□ -2.03
VPS52YDR484W FMP40Q08968 688 aaPredicted RBP2.35□□□□□ -2.03
VPS52YDR484W YDR056CQ12025 205 aa2.35□□□□□ -2.03
VPS52YDR484W CDC23P16522 626 aa2.34□□□□□ -2.03
VPS52YDR484W KAR3P17119 729 aa2.34□□□□□ -2.03
VPS52YDR484W PUP3P25451 205 aaKnown RBP2.34□□□□□ -2.03
VPS52YDR484W POL4P25615 582 aa2.34□□□□□ -2.03
VPS52YDR484W IMG1P25626 169 aa2.34□□□□□ -2.03
VPS52YDR484W YBR144CP34215 104 aa2.34□□□□□ -2.03
VPS52YDR484W YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.03
VPS52YDR484W FLC2P39719 783 aa2.34□□□□□ -2.03
VPS52YDR484W SVL3Q03088 825 aaKnown RBP2.34□□□□□ -2.03
VPS52YDR484W LUC7Q07508 261 aaPredicted RBP2.34□□□□□ -2.03
VPS52YDR484W SDH5Q08230 162 aa2.34□□□□□ -2.03
VPS52YDR484W NRT1Q08485 598 aa2.34□□□□□ -2.03
VPS52YDR484W RPS10AQ08745 105 aaPredicted RBP2.34□□□□□ -2.03
VPS52YDR484W NDD1Q08887 554 aa2.34□□□□□ -2.03
VPS52YDR484W YPL272CQ08984 517 aa2.34□□□□□ -2.03
VPS52YDR484W NMD4Q12129 218 aa2.34□□□□□ -2.03
VPS52YDR484W BSC1Q12140 328 aa2.34□□□□□ -2.03
VPS52YDR484W BAR1P12630 587 aa2.34□□□□□ -2.04
VPS52YDR484W SUI2P20459 304 aaKnown RBP2.34□□□□□ -2.04
VPS52YDR484W YNK1P36010 153 aaKnown RBP2.34□□□□□ -2.04
VPS52YDR484W SPC34P36131 295 aa2.34□□□□□ -2.04
VPS52YDR484W NUP133P36161 1157 aa2.34□□□□□ -2.04
VPS52YDR484W AZF1P41696 914 aa2.34□□□□□ -2.04
VPS52YDR484W RPS10BP46784 105 aaKnown RBP2.34□□□□□ -2.04
VPS52YDR484W RTT109Q07794 436 aa2.34□□□□□ -2.04
VPS52YDR484W YEH2Q07950 538 aa2.34□□□□□ -2.04
VPS52YDR484W CDC45Q08032 650 aa2.34□□□□□ -2.04
VPS52YDR484W SAN1P22470 610 aa2.33□□□□□ -2.04
VPS52YDR484W RPL32P38061 130 aaKnown RBP2.33□□□□□ -2.04
VPS52YDR484W RIM2P38127 377 aa2.33□□□□□ -2.04
VPS52YDR484W YTA12P40341 825 aa2.33□□□□□ -2.04
VPS52YDR484W YJL070CP40361 888 aa2.33□□□□□ -2.04
VPS52YDR484W AXL1P40851 1208 aa2.33□□□□□ -2.04
VPS52YDR484W DIM1P41819 318 aaKnown RBP2.33□□□□□ -2.04
VPS52YDR484W APT1P49435 187 aaKnown RBP2.33□□□□□ -2.04
VPS52YDR484W VID30P53076 958 aa2.33□□□□□ -2.04
VPS52YDR484W DUG3P53871 357 aa2.33□□□□□ -2.04
VPS52YDR484W YVH1Q02256 364 aaKnown RBP2.33□□□□□ -2.04
VPS52YDR484W MSS11Q03825 758 aa2.33□□□□□ -2.04
VPS52YDR484W YDL121CQ07541 149 aa2.33□□□□□ -2.04
VPS52YDR484W YEH1Q07804 573 aa2.33□□□□□ -2.04
VPS52YDR484W RCN2Q12044 265 aa2.33□□□□□ -2.04
VPS52YDR484W SPE4Q12455 300 aa2.33□□□□□ -2.04
VPS52YDR484W CSR2Q12734 1121 aa2.33□□□□□ -2.04
VPS52YDR484W AAC3P18238 307 aa2.32□□□□□ -2.04
VPS52YDR484W GLN3P18494 730 aa2.32□□□□□ -2.04
VPS52YDR484W TYR1P20049 452 aa2.32□□□□□ -2.04
VPS52YDR484W KGD1P20967 1014 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W SYN8P31377 255 aa2.32□□□□□ -2.04
VPS52YDR484W ERG1P32476 496 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W MTR2P34232 184 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W YKL023WP36103 277 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W CIN4P39110 191 aa2.32□□□□□ -2.04
VPS52YDR484W YJL068CP40363 299 aa2.32□□□□□ -2.04
VPS52YDR484W GUF1P46943 645 aa2.32□□□□□ -2.04
VPS52YDR484W YGL260WP53056 76 aa2.32□□□□□ -2.04
VPS52YDR484W SMM1P53720 384 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W TDA7P53882 636 aaPredicted RBP2.32□□□□□ -2.04
VPS52YDR484W TMA64Q04600 565 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W YMR317WQ04893 1140 aa2.32□□□□□ -2.04
VPS52YDR484W PEP5P12868 1029 aa2.32□□□□□ -2.04
VPS52YDR484W ART10P18634 518 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W SEC1P30619 724 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W ACH1P32316 526 aa2.32□□□□□ -2.04
VPS52YDR484W VPS17P32913 551 aa2.32□□□□□ -2.04
VPS52YDR484W SEF1P34228 1148 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms