Protein–RNA interactions for Protein: P53056

YGL260W, Putative UPF0377 protein YGL260W, yeastyeast

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGL260WP53056 YML009W-BYML009W-B 477 nt18.54■□□□□ 0.56
YGL260WP53056 NOP1YDL014W 984 nt18.25■□□□□ 0.51
YGL260WP53056 NSR1YGR159C 1245 nt18.09■□□□□ 0.49
YGL260WP53056 YKL036CYKL036C 393 nt17.28■□□□□ 0.36
YGL260WP53056 Q0297Q0297 156 nt16.18■□□□□ 0.18
YGL260WP53056 YJL027CYJL027C 417 nt16.18■□□□□ 0.18
YGL260WP53056 SRX1YKL086W 384 nt15.98■□□□□ 0.15
YGL260WP53056 SCS3YGL126W 1143 nt15.97■□□□□ 0.15
YGL260WP53056 MDJ1YFL016C 1536 nt15.57■□□□□ 0.08
YGL260WP53056 YCR051WYCR051W 669 nt15.11■□□□□ 0.01
YGL260WP53056 YOL085CYOL085C 342 nt14.95□□□□□ -0.02
YGL260WP53056 SCJ1YMR214W 1134 nt14.8□□□□□ -0.04
YGL260WP53056 PKP1YIL042C 1185 nt14.6□□□□□ -0.07
YGL260WP53056 RPP1BYDL130W 321 nt14.49□□□□□ -0.09
YGL260WP53056 ATS1YAL020C 1002 nt14.41□□□□□ -0.1
YGL260WP53056 TRN1tP(UGG)A 72 nt14.19□□□□□ -0.14
YGL260WP53056 SUF9tP(UGG)F 72 nt14.19□□□□□ -0.14
YGL260WP53056 SUF8tP(UGG)H 72 nt14.19□□□□□ -0.14
YGL260WP53056 tP(UGG)LtP(UGG)L 72 nt14.19□□□□□ -0.14
YGL260WP53056 SUF7tP(UGG)M 72 nt14.19□□□□□ -0.14
YGL260WP53056 tP(UGG)N1tP(UGG)N1 72 nt14.19□□□□□ -0.14
YGL260WP53056 tP(UGG)N2tP(UGG)N2 72 nt14.19□□□□□ -0.14
YGL260WP53056 tP(UGG)O1tP(UGG)O1 72 nt14.19□□□□□ -0.14
YGL260WP53056 SUF11tP(UGG)O2 72 nt14.19□□□□□ -0.14
YGL260WP53056 DBP2YNL112W 1641 nt14.02□□□□□ -0.16
YGL260WP53056 CCC1YLR220W 969 nt13.93□□□□□ -0.18
YGL260WP53056 PET122YER153C 765 nt13.77□□□□□ -0.21
YGL260WP53056 SCR1SCR1 522 nt13.74□□□□□ -0.21
YGL260WP53056 tP(UGG)O3tP(UGG)O3 72 nt13.54□□□□□ -0.24
YGL260WP53056 RRN5YLR141W 1092 nt13.4□□□□□ -0.26
YGL260WP53056 RTC3YHR087W 336 nt13.34□□□□□ -0.27
YGL260WP53056 PST2YDR032C 597 nt13.28□□□□□ -0.28
YGL260WP53056 RVS167YDR388W 1449 nt13.25□□□□□ -0.29
YGL260WP53056 RSB1YOR049C 1065 nt13.25□□□□□ -0.29
YGL260WP53056 YBR190WYBR190W 312 nt13.2□□□□□ -0.3
YGL260WP53056 YER088W-BYER088W-B 147 nt13.16□□□□□ -0.3
YGL260WP53056 YDJ1YNL064C 1230 nt13.14□□□□□ -0.31
YGL260WP53056 YKL097CYKL097C 411 nt12.97□□□□□ -0.33
YGL260WP53056 SHR5YOL110W 714 nt12.94□□□□□ -0.34
YGL260WP53056 GAR1YHR089C 618 nt12.68□□□□□ -0.38
YGL260WP53056 SHU1YHL006C 453 nt12.61□□□□□ -0.39
YGL260WP53056 YOR139CYOR139C 393 nt12.39□□□□□ -0.43
YGL260WP53056 DEP1YAL013W 1218 nt12.32□□□□□ -0.44
YGL260WP53056 TIR1YER011W 765 nt12.27□□□□□ -0.45
YGL260WP53056 YNL208WYNL208W 600 nt12.26□□□□□ -0.45
YGL260WP53056 URN1YPR152C 1398 nt12.25□□□□□ -0.45
YGL260WP53056 RPN10YHR200W 807 nt12.2□□□□□ -0.46
YGL260WP53056 YAL037C-BYAL037C-B 975 nt12.2□□□□□ -0.46
YGL260WP53056 NPL3YDR432W 1245 nt12.15□□□□□ -0.46
YGL260WP53056 SSA1YAL005C 1929 nt12.03□□□□□ -0.48
YGL260WP53056 OPI9YLR338W 858 nt12.01□□□□□ -0.49
YGL260WP53056 YGR021WYGR021W 873 nt11.92□□□□□ -0.5
YGL260WP53056 SRB2YHR041C 633 nt11.92□□□□□ -0.5
YGL260WP53056 YOL037CYOL037C 354 nt11.92□□□□□ -0.5
YGL260WP53056 HOM6YJR139C 1080 nt11.91□□□□□ -0.5
YGL260WP53056 MNP1YGL068W 585 nt11.87□□□□□ -0.51
YGL260WP53056 tM(CAU)CtM(CAU)C 72 nt11.86□□□□□ -0.51
YGL260WP53056 IMT4tM(CAU)E 72 nt11.86□□□□□ -0.51
YGL260WP53056 IMT3tM(CAU)J3 72 nt11.86□□□□□ -0.51
YGL260WP53056 IMT1tM(CAU)O1 72 nt11.86□□□□□ -0.51
YGL260WP53056 IMT2tM(CAU)P 72 nt11.86□□□□□ -0.51
YGL260WP53056 WWM1YFL010C 636 nt11.79□□□□□ -0.52
YGL260WP53056 SAH1YER043C 1350 nt11.76□□□□□ -0.53
YGL260WP53056 YJR018WYJR018W 363 nt11.72□□□□□ -0.53
YGL260WP53056 RKM5YLR137W 1104 nt11.72□□□□□ -0.53
YGL260WP53056 YJR120WYJR120W 351 nt11.69□□□□□ -0.54
YGL260WP53056 PUN1YLR414C 792 nt11.67□□□□□ -0.54
YGL260WP53056 YFL021C-AYFL021C-A 855 nt11.65□□□□□ -0.54
YGL260WP53056 PUT4YOR348C 1884 nt11.63□□□□□ -0.55
YGL260WP53056 SSA3YBL075C 1950 nt11.61□□□□□ -0.55
YGL260WP53056 MOT3YMR070W 1473 nt11.6□□□□□ -0.55
YGL260WP53056 RPP2BYDR382W 333 nt11.6□□□□□ -0.55
YGL260WP53056 YLR281CYLR281C 468 nt11.58□□□□□ -0.56
YGL260WP53056 PUS2YGL063W 1113 nt11.57□□□□□ -0.56
YGL260WP53056 ARE1YCR048W 1833 nt11.56□□□□□ -0.56
YGL260WP53056 BDH2YAL061W 1254 nt11.48□□□□□ -0.57
YGL260WP53056 BSC6YOL137W 1494 nt11.46□□□□□ -0.57
YGL260WP53056 LSM3YLR438C-A 270 nt11.44□□□□□ -0.58
YGL260WP53056 WHI5YOR083W 888 nt11.44□□□□□ -0.58
YGL260WP53056 YHR049C-AYHR049C-A 297 nt11.39□□□□□ -0.59
YGL260WP53056 MRPL8YJL063C 717 nt11.39□□□□□ -0.59
YGL260WP53056 PTC2YER089C 1395 nt11.39□□□□□ -0.59
YGL260WP53056 FMP45YDL222C 930 nt11.28□□□□□ -0.6
YGL260WP53056 DSK2YMR276W 1122 nt11.27□□□□□ -0.61
YGL260WP53056 INM2YDR287W 879 nt11.26□□□□□ -0.61
YGL260WP53056 YPR011CYPR011C 981 nt11.26□□□□□ -0.61
YGL260WP53056 IMP2'YIL154C 1041 nt11.25□□□□□ -0.61
YGL260WP53056 POA1YBR022W 534 nt11.24□□□□□ -0.61
YGL260WP53056 YCH1YGR203W 447 nt11.23□□□□□ -0.61
YGL260WP53056 YLR236CYLR236C 324 nt11.23□□□□□ -0.61
YGL260WP53056 NAB2YGL122C 1578 nt11.21□□□□□ -0.61
YGL260WP53056 YBL100CYBL100C 315 nt11.21□□□□□ -0.61
YGL260WP53056 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
YGL260WP53056 FIS1YIL065C 468 nt11.15□□□□□ -0.62
YGL260WP53056 ADO1YJR105W 1023 nt11.15□□□□□ -0.62
YGL260WP53056 TRM9YML014W 840 nt11.13□□□□□ -0.63
YGL260WP53056 YLR154C-GYLR154C-G 150 nt11.12□□□□□ -0.63
YGL260WP53056 BUD23YCR047C 828 nt11.1□□□□□ -0.63
YGL260WP53056 FUN26YAL022C 1554 nt11.1□□□□□ -0.63
YGL260WP53056 YEL076C-AYEL076C-A 651 nt11.08□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms