RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B DIA1P54005 336 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B VPS64Q03944 604 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B WTM1Q12363 437 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B PTR2P32901 601 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B SEF1P34228 1148 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B ESL2P36168 1195 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B GET2P40056 285 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B DCP2P53550 970 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B TAF8Q03750 510 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B AAD4Q07747 329 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B YBR182C-AQ8TGU6 64 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B SUI2P20459 304 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B ROT2P38138 954 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B NMD2P38798 1089 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B UBA4P38820 440 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B YND1P40009 630 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B VPS27P40343 622 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B YFR016CP43597 1233 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B IGO1P53897 168 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B NOP15P53927 220 aaPredicted RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B CAC2Q04199 468 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B VPS74Q06385 345 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B TLG2Q08144 397 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B VPS33P20795 691 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B RSM22P36056 628 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B YNL193WP53870 558 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B KTR6P54070 446 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B YCG1Q06680 1035 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B RMP1Q12530 201 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B CYR1P08678 2026 aaKnown RBP0.4□□□□□ -2.34
YNL054W-BYNL054W-B RPS17AP02407 136 aaKnown RBP0.4□□□□□ -2.34
YNL054W-BYNL054W-B ATR1P13090 542 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B RPS17BP14127 136 aaKnown RBP0.4□□□□□ -2.34
YNL054W-BYNL054W-B EST1P17214 699 aaPredicted RBP0.4□□□□□ -2.34
YNL054W-BYNL054W-B SIR1P21691 654 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B MGR1P25573 417 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B OPY1P38271 328 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B EXO1P39875 702 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B VFA1P40080 203 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B BOR1P53838 576 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B UME1Q03010 460 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B MRD1Q06106 887 aaKnown RBP0.4□□□□□ -2.34
YNL054W-BYNL054W-B APL4Q12028 832 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B YBL111CQ3E7Y5 667 aa0.4□□□□□ -2.34
YNL054W-BYNL054W-B SWI1P09547 1314 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B COX1P00401 534 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B RPL20AP0CX23 172 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B RPL20BP0CX24 172 aaPredicted RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B VPS17P32913 551 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B SEC9P40357 651 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B VPS4P52917 437 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B SKY1Q03656 742 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B SET6Q12529 373 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B VBA2P38358 474 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B PEX14P53112 341 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B YDR109CQ04585 715 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B MUM3Q08750 479 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B LSP1Q12230 341 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B TUS1Q06412 1307 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B PET123P17558 318 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B KGD2P19262 463 aaPredicted RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B MPE1P35728 441 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B RPS7BP48164 190 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B HOL1P53389 586 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B BRE5P53741 515 aaKnown RBP0.4□□□□□ -2.35
YNL054W-BYNL054W-B HAL1Q01766 294 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B HER2Q03557 464 aa0.4□□□□□ -2.35
YNL054W-BYNL054W-B HOG1P32485 435 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B HYR1P40581 163 aaKnown RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B CIN1P40987 1014 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B IDP2P41939 412 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B IKS1P47042 667 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B YJR039WP47107 1121 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B YDL186WP48568 277 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B ZDS2P54786 942 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B ACS1Q01574 713 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B YPL108WQ02872 168 aaPredicted RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B NGL1Q08213 363 aaKnown RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B ESA1Q08649 445 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B BAG7Q12128 409 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B RPS19AP07280 144 aaKnown RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B RPS19BP07281 144 aaPredicted RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B SKN1P33336 771 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B FAT1P38225 669 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B SSN8P47821 323 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B RTS3P53289 263 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B CRH1P53301 507 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B ARP9Q05123 467 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B NDE2Q07500 545 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B RDR1Q08904 546 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B BSC1Q12140 328 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B APC2Q12440 853 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B PMR1P13586 950 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B HSP26P15992 214 aaKnown RBP RIP-Chip data0.39□□□□□ -2.35not detected
YNL054W-BYNL054W-B SRV2P17555 526 aaKnown RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B COX11P19516 300 aaKnown RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B GID7P25569 745 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B RFT1P38206 574 aaPredicted RBP0.39□□□□□ -2.35
YNL054W-BYNL054W-B ELO1P39540 310 aa0.39□□□□□ -2.35
YNL054W-BYNL054W-B FLC3P53121 802 aa0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms