RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B FAP1P53971 965 aa3.6□□□□□ -1.83
YNL054W-BYNL054W-B PRY3P47033 881 aa3.3□□□□□ -1.88
YNL054W-BYNL054W-B HAA1Q12753 694 aaKnown RBP3.24□□□□□ -1.89
YNL054W-BYNL054W-B MTC1P47018 478 aaKnown RBP3.2□□□□□ -1.9
YNL054W-BYNL054W-B AAD16Q02895 342 aa3.13□□□□□ -1.91
YNL054W-BYNL054W-B ISW2Q08773 1120 aa2.99□□□□□ -1.93
YNL054W-BYNL054W-B MRPL32P25348 183 aa2.92□□□□□ -1.94
YNL054W-BYNL054W-B YGL015CP33199 130 aa2.9□□□□□ -1.94
YNL054W-BYNL054W-B PRI1P10363 409 aa2.87□□□□□ -1.95
YNL054W-BYNL054W-B UBP9P39967 754 aa2.82□□□□□ -1.96
YNL054W-BYNL054W-B SIS1P25294 352 aaKnown RBP2.79□□□□□ -1.96
YNL054W-BYNL054W-B DRS1P32892 752 aaKnown RBP2.77□□□□□ -1.97
YNL054W-BYNL054W-B RPG1P38249 964 aaKnown RBP2.72□□□□□ -1.97
YNL054W-BYNL054W-B TSR3Q12094 313 aaKnown RBP2.7□□□□□ -1.98
YNL054W-BYNL054W-B BUD31P25337 157 aaPredicted RBP2.7□□□□□ -1.98
YNL054W-BYNL054W-B TIF4632P39936 914 aaKnown RBP2.66□□□□□ -1.98
YNL054W-BYNL054W-B REB1P21538 810 aa2.61□□□□□ -1.99
YNL054W-BYNL054W-B UBP10P53874 792 aaPredicted RBP2.61□□□□□ -1.99
YNL054W-BYNL054W-B RSE1Q04693 1361 aaKnown RBP2.6□□□□□ -1.99
YNL054W-BYNL054W-B YJL171CP46992 396 aa2.56□□□□□ -2
YNL054W-BYNL054W-B YCK3P39962 524 aa2.5□□□□□ -2.01
YNL054W-BYNL054W-B TGL3P40308 642 aa2.48□□□□□ -2.01
YNL054W-BYNL054W-B RPL17AP05740 184 aaKnown RBP2.45□□□□□ -2.02
YNL054W-BYNL054W-B RPL17BP46990 184 aaKnown RBP2.45□□□□□ -2.02
YNL054W-BYNL054W-B SLX5P32828 619 aaKnown RBP2.45□□□□□ -2.02
YNL054W-BYNL054W-B GTT3P39996 337 aa2.42□□□□□ -2.02
YNL054W-BYNL054W-B TFG1P41895 735 aaPredicted RBP2.41□□□□□ -2.02
YNL054W-BYNL054W-B DIP2Q12220 943 aaPredicted RBP2.36□□□□□ -2.03
YNL054W-BYNL054W-B YOR238WQ08634 303 aa2.36□□□□□ -2.03
YNL054W-BYNL054W-B BFR2Q06631 534 aaKnown RBP2.35□□□□□ -2.03
YNL054W-BYNL054W-B BMT6Q12291 365 aa2.34□□□□□ -2.03
YNL054W-BYNL054W-B SPP1Q03012 353 aa2.34□□□□□ -2.04
YNL054W-BYNL054W-B MAP2P38174 421 aaKnown RBP2.33□□□□□ -2.04
YNL054W-BYNL054W-B EAP1P36041 632 aaKnown RBP2.33□□□□□ -2.04
YNL054W-BYNL054W-B SCY1P53009 804 aa2.3□□□□□ -2.04
YNL054W-BYNL054W-B YAP5P40574 245 aa2.27□□□□□ -2.05
YNL054W-BYNL054W-B TIF11P38912 153 aaKnown RBP2.27□□□□□ -2.05
YNL054W-BYNL054W-B BBC1P47068 1157 aa2.26□□□□□ -2.05
YNL054W-BYNL054W-B GBP2P25555 427 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
YNL054W-BYNL054W-B NSR1P27476 414 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
YNL054W-BYNL054W-B YAH1Q12184 172 aaKnown RBP2.25□□□□□ -2.05
YNL054W-BYNL054W-B MSB4Q12317 492 aa2.24□□□□□ -2.05
YNL054W-BYNL054W-B ABP1P15891 592 aaKnown RBP2.24□□□□□ -2.05
YNL054W-BYNL054W-B BCK2P33306 851 aa2.23□□□□□ -2.05
YNL054W-BYNL054W-B CDC27P38042 758 aa2.22□□□□□ -2.05
YNL054W-BYNL054W-B WSC3Q12215 556 aa2.22□□□□□ -2.05
YNL054W-BYNL054W-B FKH1P40466 484 aa2.22□□□□□ -2.05
YNL054W-BYNL054W-B DCD1P06773 312 aa2.22□□□□□ -2.05
YNL054W-BYNL054W-B PEX29Q03370 554 aa2.21□□□□□ -2.06
YNL054W-BYNL054W-B YIL055CP40523 627 aaKnown RBP2.2□□□□□ -2.06
YNL054W-BYNL054W-B ULI1P43604 169 aa2.19□□□□□ -2.06
YNL054W-BYNL054W-B PTP3P40048 928 aa2.19□□□□□ -2.06
YNL054W-BYNL054W-B VNX1P42839 908 aa2.19□□□□□ -2.06
YNL054W-BYNL054W-B TFC8Q12308 588 aa2.19□□□□□ -2.06
YNL054W-BYNL054W-B SEC61P32915 480 aa2.17□□□□□ -2.06
YNL054W-BYNL054W-B YBL029C-AQ3E756 94 aa2.17□□□□□ -2.06
YNL054W-BYNL054W-B NCR1Q12200 1170 aa2.17□□□□□ -2.06
YNL054W-BYNL054W-B MST1P07236 462 aa2.16□□□□□ -2.06
YNL054W-BYNL054W-B CHL1P22516 861 aaPredicted RBP2.16□□□□□ -2.06
YNL054W-BYNL054W-B YNL035CP53962 389 aaKnown RBP2.16□□□□□ -2.06
YNL054W-BYNL054W-B JIP4Q03361 876 aa2.15□□□□□ -2.06
YNL054W-BYNL054W-B HOP09932 586 aa2.15□□□□□ -2.07
YNL054W-BYNL054W-B AIR2Q12476 344 aaKnown RBP2.14□□□□□ -2.07
YNL054W-BYNL054W-B GCR2Q01722 534 aa2.12□□□□□ -2.07
YNL054W-BYNL054W-B XDJ1P39102 459 aa2.12□□□□□ -2.07
YNL054W-BYNL054W-B LDB19Q12502 818 aa2.12□□□□□ -2.07
YNL054W-BYNL054W-B RTG1P32607 177 aa2.11□□□□□ -2.07
YNL054W-BYNL054W-B AVT3P36062 692 aa2.11□□□□□ -2.07
YNL054W-BYNL054W-B PIB1Q06651 286 aa2.11□□□□□ -2.07
YNL054W-BYNL054W-B YDL129WQ07555 291 aa2.11□□□□□ -2.07
YNL054W-BYNL054W-B YKR023WP36119 530 aaKnown RBP2.11□□□□□ -2.07
YNL054W-BYNL054W-B TFA1P36100 482 aa2.1□□□□□ -2.07
YNL054W-BYNL054W-B ELP4Q02884 456 aaKnown RBP2.1□□□□□ -2.07
YNL054W-BYNL054W-B RPP1BP10622 106 aaKnown RBP2.09□□□□□ -2.07
YNL054W-BYNL054W-B PRE3P38624 215 aa2.08□□□□□ -2.08
YNL054W-BYNL054W-B DPS1P04802 557 aaKnown RBP2.08□□□□□ -2.08
YNL054W-BYNL054W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YNL054W-BYNL054W-B SPT21P35209 758 aa2.06□□□□□ -2.08
YNL054W-BYNL054W-B YEL077CQ3E7X8 1277 aa2.06□□□□□ -2.08
YNL054W-BYNL054W-B EPS1P40557 701 aa2.05□□□□□ -2.08
YNL054W-BYNL054W-B HTA1P04911 132 aaKnown RBP2.04□□□□□ -2.08
YNL054W-BYNL054W-B HTA2P04912 132 aa2.04□□□□□ -2.08
YNL054W-BYNL054W-B SAP30P38429 201 aa2.04□□□□□ -2.08
YNL054W-BYNL054W-B RGA1P39083 1007 aa2.04□□□□□ -2.08
YNL054W-BYNL054W-B BCH2P36122 765 aa2.03□□□□□ -2.08
YNL054W-BYNL054W-B SPT23P35210 1082 aa2.03□□□□□ -2.09
YNL054W-BYNL054W-B TRK1P12685 1235 aa2.02□□□□□ -2.09
YNL054W-BYNL054W-B RSM7P47150 247 aa2.01□□□□□ -2.09
YNL054W-BYNL054W-B VRP1P37370 817 aa2.01□□□□□ -2.09
YNL054W-BYNL054W-B YOL036WQ08206 761 aa2□□□□□ -2.09
YNL054W-BYNL054W-B IOC2Q12072 812 aa2□□□□□ -2.09
YNL054W-BYNL054W-B MRF1P30775 413 aaPredicted RBP1.99□□□□□ -2.09
YNL054W-BYNL054W-B RIM101P33400 625 aa1.99□□□□□ -2.09
YNL054W-BYNL054W-B BDF1P35817 686 aa1.99□□□□□ -2.09
YNL054W-BYNL054W-B RGA2Q06407 1009 aa1.99□□□□□ -2.09
YNL054W-BYNL054W-B GYP5Q12344 894 aa1.99□□□□□ -2.09
YNL054W-BYNL054W-B IFH1P39520 1085 aa1.99□□□□□ -2.09
YNL054W-BYNL054W-B TRP5P00931 707 aaKnown RBP1.98□□□□□ -2.09
YNL054W-BYNL054W-B SET4P42948 560 aa1.98□□□□□ -2.09
YNL054W-BYNL054W-B PTC2P39966 464 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms