RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM2	YIL138C	RTS1	P38903	757 aa		2.71	□□□□□ -1.98
TPM2	YIL138C	VPS4	P52917	437 aa		2.71	□□□□□ -1.98
TPM2	YIL138C	ADD37	Q03233	198 aa		2.71	□□□□□ -1.98
TPM2	YIL138C	OPY2	Q06810	360 aa		2.71	□□□□□ -1.98
TPM2	YIL138C	BUD21	Q08492	214 aa	Predicted RBP	2.71	□□□□□ -1.98
TPM2	YIL138C	NUS1	Q12063	375 aa		2.71	□□□□□ -1.98
TPM2	YIL138C	TKL1	P23254	680 aa	Known RBP	2.7	□□□□□ -1.98
TPM2	YIL138C	GID7	P25569	745 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	SAC1	P32368	623 aa	Known RBP	2.7	□□□□□ -1.98
TPM2	YIL138C	SOF1	P33750	489 aa	Known RBP	2.7	□□□□□ -1.98
TPM2	YIL138C	SWH1	P35845	1188 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	MIC60	P36112	540 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	SLX1	P38324	304 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	MRX1	P40050	688 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	RGI2	P40188	164 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	FET5	P43561	622 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	BOR1	P53838	576 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	SUB1	P54000	292 aa	Known RBP	2.7	□□□□□ -1.98
TPM2	YIL138C	YDL121C	Q07541	149 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	NBP2	Q12163	236 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	YOR019W	Q99248	730 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	VCX1	Q99385	411 aa		2.7	□□□□□ -1.98
TPM2	YIL138C	CHO1	P08456	276 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	RPB8	P20436	146 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	MRP20	P32387	263 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	SRB5	P32585	307 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	NTR2	P36118	322 aa	Predicted RBP	2.69	□□□□□ -1.98
TPM2	YIL138C	GEX2	P36173	615 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	STV1	P37296	890 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	UBP13	P38187	747 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	PSD1	P39006	500 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	HXT9	P40885	567 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	MEP3	P53390	489 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	PSK2	Q08217	1101 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	BSC6	Q08280	497 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	NKP1	Q12493	238 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	EDE1	P34216	1381 aa		2.69	□□□□□ -1.98
TPM2	YIL138C	FUM1	P08417	488 aa	Known RBP	2.68	□□□□□ -1.98
TPM2	YIL138C	KRS1	P15180	591 aa	Known RBP	2.68	□□□□□ -1.98
TPM2	YIL138C	CLB2	P24869	491 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	GFD2	P25370	566 aa	Known RBP	2.68	□□□□□ -1.98
TPM2	YIL138C	LDB16	P25587	256 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	CHS3	P29465	1165 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	ALY1	P36117	915 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	RFC1	P38630	861 aa	Known RBP	2.68	□□□□□ -1.98
TPM2	YIL138C	YEL068C	P39977	110 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YJL068C	P40363	299 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	DPH1	P40487	425 aa	Known RBP	2.68	□□□□□ -1.98
TPM2	YIL138C	SWP82	P43554	623 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YPI1	P43587	155 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YGL242C	P53066	181 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	RSM28	Q03430	361 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	RCO1	Q04779	684 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YLL056C	Q12177	298 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	SKM1	Q12469	655 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	ENT1	Q12518	454 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YOL087C	Q99247	1116 aa		2.68	□□□□□ -1.98
TPM2	YIL138C	YBR085C-A	O43137	85 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	HXK2	P04807	486 aa	Known RBP	2.67	□□□□□ -1.98
TPM2	YIL138C	RPB2	P08518	1224 aa	Known RBP	2.67	□□□□□ -1.98
TPM2	YIL138C	RAP1	P11938	827 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	PRE8	P23639	250 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	CBF2	P32504	956 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	AAP1	P37898	856 aa	Known RBP	2.67	□□□□□ -1.98
TPM2	YIL138C	PCA1	P38360	1216 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	SEC31	P38968	1273 aa	Known RBP	2.67	□□□□□ -1.98
TPM2	YIL138C	SLZ1	P40167	298 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	LYS14	P40971	790 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	IME4	P41833	600 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	SPG5	P42933	373 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	YJL132W	P47014	750 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	BSC5	P53755	489 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	MAK10	Q02197	733 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	SVL3	Q03088	825 aa	Known RBP	2.67	□□□□□ -1.98
TPM2	YIL138C	MUB1	Q03162	620 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	ENT4	Q07872	247 aa		2.67	□□□□□ -1.98
TPM2	YIL138C	PET111	P08468	800 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	CDC24	P11433	854 aa	Predicted RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	SRP54	P20424	541 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	MUD2	P36084	527 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	ESL2	P36168	1195 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	YBP1	P38315	674 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	RRT2	P38332	387 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	ERG7	P38604	731 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	RRP3	P38712	501 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	ECM10	P39987	644 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	SEC24	P40482	926 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	RPN11	P43588	306 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	ARC1	P46672	376 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	CTK2	P46962	323 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	NNF2	P53253	936 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	YNR061C	P53747	219 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	SKG3	Q06315	1026 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	VIP1	Q06685	1146 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	RIX7	Q07844	837 aa	Known RBP	2.66	□□□□□ -1.98
TPM2	YIL138C	YDR056C	Q12025	205 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	SGS1	P35187	1447 aa		2.66	□□□□□ -1.98
TPM2	YIL138C	ERG1	P32476	496 aa	Known RBP	2.65	□□□□□ -1.99
TPM2	YIL138C	LOS1	P33418	1100 aa	Predicted RBP	2.65	□□□□□ -1.99
TPM2	YIL138C	BUR6	P40096	142 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms