RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	RHO5	P53879	331 aa	Known RBP	4.94	□□□□□ -1.62
APL6	YGR261C	FRK1	Q03002	865 aa	Predicted RBP	4.94	□□□□□ -1.62
APL6	YGR261C	AEP3	Q12089	606 aa		4.94	□□□□□ -1.62
APL6	YGR261C	RHB1	P25378	209 aa		4.93	□□□□□ -1.62
APL6	YGR261C	SPO23	P33757	523 aa		4.93	□□□□□ -1.62
APL6	YGR261C	CPR5	P35176	225 aa		4.93	□□□□□ -1.62
APL6	YGR261C	CAF4	P36130	643 aa		4.93	□□□□□ -1.62
APL6	YGR261C	MAL32	P38158	584 aa		4.93	□□□□□ -1.62
APL6	YGR261C	GDT1	P38301	280 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	FHL1	P39521	936 aa		4.93	□□□□□ -1.62
APL6	YGR261C	INP52	P50942	1183 aa		4.93	□□□□□ -1.62
APL6	YGR261C	MAL12	P53341	584 aa		4.93	□□□□□ -1.62
APL6	YGR261C	RPA49	Q01080	415 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	MTD1	Q02046	320 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	NDE2	Q07500	545 aa		4.93	□□□□□ -1.62
APL6	YGR261C	DCI1	Q08558	271 aa		4.93	□□□□□ -1.62
APL6	YGR261C	RDR1	Q08904	546 aa		4.93	□□□□□ -1.62
APL6	YGR261C	RIM20	Q12033	661 aa		4.93	□□□□□ -1.62
APL6	YGR261C	HIS4	P00815	799 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	ARG4	P04076	463 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	ABF1	P14164	731 aa		4.93	□□□□□ -1.62
APL6	YGR261C	CMK2	P22517	447 aa		4.93	□□□□□ -1.62
APL6	YGR261C	SEC65	P29478	273 aa		4.93	□□□□□ -1.62
APL6	YGR261C	MCM4	P30665	933 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	AAR2	P32357	355 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	MRP20	P32387	263 aa		4.93	□□□□□ -1.62
APL6	YGR261C	YBL055C	P34220	418 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	YBR139W	P38109	508 aa		4.93	□□□□□ -1.62
APL6	YGR261C	MED8	P38304	223 aa		4.93	□□□□□ -1.62
APL6	YGR261C	JHD1	P40034	492 aa		4.93	□□□□□ -1.62
APL6	YGR261C	RGI2	P40188	164 aa		4.93	□□□□□ -1.62
APL6	YGR261C	NIT3	P49954	291 aa		4.93	□□□□□ -1.62
APL6	YGR261C	DRN1	P53255	507 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	RRP46	P53256	223 aa	Predicted RBP	4.93	□□□□□ -1.62
APL6	YGR261C	RTT102	P53330	157 aa		4.93	□□□□□ -1.62
APL6	YGR261C	FYV6	P53913	173 aa		4.93	□□□□□ -1.62
APL6	YGR261C	YMR265C	Q03508	461 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	ENT5	Q03769	411 aa	Known RBP	4.93	□□□□□ -1.62
APL6	YGR261C	PPM1	Q04081	328 aa		4.93	□□□□□ -1.62
APL6	YGR261C	CTS2	Q06350	511 aa		4.93	□□□□□ -1.62
APL6	YGR261C	ENT4	Q07872	247 aa		4.93	□□□□□ -1.62
APL6	YGR261C	CDC26	P14724	124 aa		4.92	□□□□□ -1.62
APL6	YGR261C	UGA1	P17649	471 aa		4.92	□□□□□ -1.62
APL6	YGR261C	SWI4	P25302	1093 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	PET18	P25362	215 aa		4.92	□□□□□ -1.62
APL6	YGR261C	RRT2	P38332	387 aa		4.92	□□□□□ -1.62
APL6	YGR261C	OSH7	P38755	437 aa		4.92	□□□□□ -1.62
APL6	YGR261C	GIM4	P40005	111 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	PFK26	P40433	827 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	FMC1	P40491	155 aa		4.92	□□□□□ -1.62
APL6	YGR261C	PCI8	P40512	444 aa		4.92	□□□□□ -1.62
APL6	YGR261C	IBA57	P47158	497 aa		4.92	□□□□□ -1.62
APL6	YGR261C	STB4	P50104	949 aa		4.92	□□□□□ -1.62
APL6	YGR261C	YGR126W	P53274	230 aa		4.92	□□□□□ -1.62
APL6	YGR261C	GOR1	P53839	350 aa		4.92	□□□□□ -1.62
APL6	YGR261C	YNL181W	P53878	407 aa		4.92	□□□□□ -1.62
APL6	YGR261C	BNA7	Q04066	261 aa		4.92	□□□□□ -1.62
APL6	YGR261C	THI3	Q07471	609 aa		4.92	□□□□□ -1.62
APL6	YGR261C	MET7	Q08645	548 aa		4.92	□□□□□ -1.62
APL6	YGR261C	RAD9	P14737	1309 aa		4.92	□□□□□ -1.62
APL6	YGR261C	DED1	P06634	604 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	RAD3	P06839	778 aa		4.92	□□□□□ -1.62
APL6	YGR261C	UBA1	P22515	1024 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	ADY2	P25613	283 aa		4.92	□□□□□ -1.62
APL6	YGR261C	PEX3	P28795	441 aa		4.92	□□□□□ -1.62
APL6	YGR261C	MVD1	P32377	396 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	PMT1	P33775	817 aa		4.92	□□□□□ -1.62
APL6	YGR261C	SCD5	P34758	872 aa		4.92	□□□□□ -1.62
APL6	YGR261C	YKL063C	P35725	167 aa		4.92	□□□□□ -1.62
APL6	YGR261C	DBP7	P36120	742 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	LDH1	P38139	375 aa		4.92	□□□□□ -1.62
APL6	YGR261C	CDS1	P38221	457 aa		4.92	□□□□□ -1.62
APL6	YGR261C	SRP68	P38687	599 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	SOP4	P39543	234 aa	Predicted RBP	4.92	□□□□□ -1.62
APL6	YGR261C	YJR056C	P47115	236 aa		4.92	□□□□□ -1.62
APL6	YGR261C	UBC9	P50623	157 aa	Predicted RBP	4.92	□□□□□ -1.62
APL6	YGR261C	RRN9	P53437	365 aa		4.92	□□□□□ -1.62
APL6	YGR261C	RMI1	Q02685	241 aa		4.92	□□□□□ -1.62
APL6	YGR261C	YDC1	Q02896	317 aa		4.92	□□□□□ -1.62
APL6	YGR261C	YML082W	Q04533	649 aa	Known RBP	4.92	□□□□□ -1.62
APL6	YGR261C	DDC1	Q08949	612 aa		4.92	□□□□□ -1.62
APL6	YGR261C	SFG1	Q12507	346 aa		4.92	□□□□□ -1.62
APL6	YGR261C	RAD50	P12753	1312 aa		4.91	□□□□□ -1.62
APL6	YGR261C	MSF1	P08425	469 aa		4.91	□□□□□ -1.62
APL6	YGR261C	ALG1	P16661	449 aa		4.91	□□□□□ -1.62
APL6	YGR261C	YME2	P32843	850 aa		4.91	□□□□□ -1.62
APL6	YGR261C	UTP11	P34247	250 aa	Predicted RBP	4.91	□□□□□ -1.62
APL6	YGR261C	RRP1	P35178	278 aa	Predicted RBP	4.91	□□□□□ -1.62
APL6	YGR261C	QDR2	P40474	542 aa		4.91	□□□□□ -1.62
APL6	YGR261C	GAB1	P41733	394 aa		4.91	□□□□□ -1.62
APL6	YGR261C	DIA3	P52290	468 aa		4.91	□□□□□ -1.62
APL6	YGR261C	SKI8	Q02793	397 aa	Predicted RBP	4.91	□□□□□ -1.62
APL6	YGR261C	INA17	Q02888	182 aa		4.91	□□□□□ -1.62
APL6	YGR261C	PPN1	Q04119	674 aa		4.91	□□□□□ -1.62
APL6	YGR261C	YOR289W	Q12012	251 aa	Predicted RBP	4.91	□□□□□ -1.62
APL6	YGR261C	CDC37	P06101	506 aa	Known RBP	4.91	□□□□□ -1.62
APL6	YGR261C	CBP1	P07252	654 aa		4.91	□□□□□ -1.62
APL6	YGR261C	SSC1	P0CS90	654 aa	Known RBP	4.91	□□□□□ -1.62
APL6	YGR261C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
APL6	YGR261C	MEK1	P24719	497 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms