Protein–RNA interactions for Protein: P28795

PEX3, Peroxisomal biogenesis factor 3, yeastyeast

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX3P28795 NSR1YGR159C 1245 nt19.28■□□□□ 0.68
PEX3P28795 YML009W-BYML009W-B 477 nt19.04■□□□□ 0.64
PEX3P28795 NOP1YDL014W 984 nt18.38■□□□□ 0.53
PEX3P28795 MDJ1YFL016C 1536 nt17.45■□□□□ 0.38
PEX3P28795 YKL036CYKL036C 393 nt16.59■□□□□ 0.25
PEX3P28795 YJL027CYJL027C 417 nt16.08■□□□□ 0.16
PEX3P28795 SRX1YKL086W 384 nt16.06■□□□□ 0.16
PEX3P28795 Q0297Q0297 156 nt15.97■□□□□ 0.15
PEX3P28795 DBP2YNL112W 1641 nt15.31■□□□□ 0.04
PEX3P28795 YCR051WYCR051W 669 nt15.16■□□□□ 0.02
PEX3P28795 YBR190WYBR190W 312 nt15.01□□□□□ -0.01
PEX3P28795 SCS3YGL126W 1143 nt14.9□□□□□ -0.02
PEX3P28795 TRN1tP(UGG)A 72 nt14.76□□□□□ -0.05
PEX3P28795 SUF9tP(UGG)F 72 nt14.76□□□□□ -0.05
PEX3P28795 SUF8tP(UGG)H 72 nt14.76□□□□□ -0.05
PEX3P28795 tP(UGG)LtP(UGG)L 72 nt14.76□□□□□ -0.05
PEX3P28795 SUF7tP(UGG)M 72 nt14.76□□□□□ -0.05
PEX3P28795 tP(UGG)N1tP(UGG)N1 72 nt14.76□□□□□ -0.05
PEX3P28795 tP(UGG)N2tP(UGG)N2 72 nt14.76□□□□□ -0.05
PEX3P28795 tP(UGG)O1tP(UGG)O1 72 nt14.76□□□□□ -0.05
PEX3P28795 SUF11tP(UGG)O2 72 nt14.76□□□□□ -0.05
PEX3P28795 RTC3YHR087W 336 nt14.61□□□□□ -0.07
PEX3P28795 CCC1YLR220W 969 nt14.54□□□□□ -0.08
PEX3P28795 SSA3YBL075C 1950 nt14.53□□□□□ -0.08
PEX3P28795 YOL085CYOL085C 342 nt14.38□□□□□ -0.11
PEX3P28795 RPP1BYDL130W 321 nt14.32□□□□□ -0.12
PEX3P28795 RVS167YDR388W 1449 nt14.31□□□□□ -0.12
PEX3P28795 PKP1YIL042C 1185 nt14.17□□□□□ -0.14
PEX3P28795 SCJ1YMR214W 1134 nt14.16□□□□□ -0.14
PEX3P28795 PUT4YOR348C 1884 nt13.92□□□□□ -0.18
PEX3P28795 tP(UGG)O3tP(UGG)O3 72 nt13.81□□□□□ -0.2
PEX3P28795 SHR5YOL110W 714 nt13.73□□□□□ -0.21
PEX3P28795 PET122YER153C 765 nt13.72□□□□□ -0.21
PEX3P28795 URN1YPR152C 1398 nt13.56□□□□□ -0.24
PEX3P28795 ARE1YCR048W 1833 nt13.55□□□□□ -0.24
PEX3P28795 SCR1SCR1 522 nt13.47□□□□□ -0.25
PEX3P28795 OPI9YLR338W 858 nt13.45□□□□□ -0.26
PEX3P28795 SAH1YER043C 1350 nt13.45□□□□□ -0.26
PEX3P28795 POA1YBR022W 534 nt13.42□□□□□ -0.26
PEX3P28795 DEP1YAL013W 1218 nt13.41□□□□□ -0.26
PEX3P28795 YDJ1YNL064C 1230 nt13.39□□□□□ -0.27
PEX3P28795 YHR049C-AYHR049C-A 297 nt13.37□□□□□ -0.27
PEX3P28795 RPN10YHR200W 807 nt13.29□□□□□ -0.28
PEX3P28795 RRN5YLR141W 1092 nt13.27□□□□□ -0.29
PEX3P28795 BSC6YOL137W 1494 nt13.23□□□□□ -0.29
PEX3P28795 ATS1YAL020C 1002 nt13.21□□□□□ -0.29
PEX3P28795 YNL208WYNL208W 600 nt13.2□□□□□ -0.3
PEX3P28795 GAR1YHR089C 618 nt13.1□□□□□ -0.31
PEX3P28795 PUN1YLR414C 792 nt13.07□□□□□ -0.32
PEX3P28795 YER088W-BYER088W-B 147 nt13.01□□□□□ -0.33
PEX3P28795 BUD23YCR047C 828 nt13□□□□□ -0.33
PEX3P28795 PTC2YER089C 1395 nt12.94□□□□□ -0.34
PEX3P28795 SPT5YML010W 3192 nt12.92□□□□□ -0.34
PEX3P28795 YJR018WYJR018W 363 nt12.91□□□□□ -0.34
PEX3P28795 RSB1YOR049C 1065 nt12.87□□□□□ -0.35
PEX3P28795 NAB2YGL122C 1578 nt12.85□□□□□ -0.35
PEX3P28795 SSA4YER103W 1929 nt12.74□□□□□ -0.37
PEX3P28795 TIR1YER011W 765 nt12.7□□□□□ -0.38
PEX3P28795 FIS1YIL065C 468 nt12.65□□□□□ -0.38
PEX3P28795 YJR120WYJR120W 351 nt12.65□□□□□ -0.38
PEX3P28795 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
PEX3P28795 DAL1YIR027C 1383 nt12.61□□□□□ -0.39
PEX3P28795 RPP2BYDR382W 333 nt12.56□□□□□ -0.4
PEX3P28795 FPR4YLR449W 1179 nt12.52□□□□□ -0.41
PEX3P28795 INM2YDR287W 879 nt12.51□□□□□ -0.41
PEX3P28795 PHO4YFR034C 939 nt12.49□□□□□ -0.41
PEX3P28795 MEP2YNL142W 1500 nt12.46□□□□□ -0.42
PEX3P28795 YPS1YLR120C 1710 nt12.39□□□□□ -0.43
PEX3P28795 BDF1YLR399C 2061 nt12.37□□□□□ -0.43
PEX3P28795 SRB2YHR041C 633 nt12.33□□□□□ -0.44
PEX3P28795 YBL100CYBL100C 315 nt12.33□□□□□ -0.44
PEX3P28795 PST2YDR032C 597 nt12.31□□□□□ -0.44
PEX3P28795 YDR095CYDR095C 411 nt12.26□□□□□ -0.45
PEX3P28795 YHR165W-AYHR165W-A 312 nt12.25□□□□□ -0.45
PEX3P28795 BDH2YAL061W 1254 nt12.25□□□□□ -0.45
PEX3P28795 DCW1YKL046C 1350 nt12.24□□□□□ -0.45
PEX3P28795 TAT1YBR069C 1860 nt12.18□□□□□ -0.46
PEX3P28795 FUN26YAL022C 1554 nt12.17□□□□□ -0.46
PEX3P28795 EMI2YDR516C 1503 nt12.09□□□□□ -0.47
PEX3P28795 PAC11YDR488C 1602 nt12.07□□□□□ -0.48
PEX3P28795 WWM1YFL010C 636 nt12.06□□□□□ -0.48
PEX3P28795 TRM9YML014W 840 nt12.06□□□□□ -0.48
PEX3P28795 ALF1YNL148C 765 nt12.06□□□□□ -0.48
PEX3P28795 LSM3YLR438C-A 270 nt12.03□□□□□ -0.48
PEX3P28795 YMR090WYMR090W 684 nt12.03□□□□□ -0.48
PEX3P28795 PTP1YDL230W 1008 nt12.01□□□□□ -0.49
PEX3P28795 RPP2AYOL039W 321 nt12.01□□□□□ -0.49
PEX3P28795 YBR220CYBR220C 1683 nt12□□□□□ -0.49
PEX3P28795 CCT6YDR188W 1641 nt11.99□□□□□ -0.49
PEX3P28795 YDL221WYDL221W 552 nt11.98□□□□□ -0.49
PEX3P28795 CAC2YML102W 1407 nt11.95□□□□□ -0.5
PEX3P28795 YGR021WYGR021W 873 nt11.92□□□□□ -0.5
PEX3P28795 YFL021C-AYFL021C-A 855 nt11.91□□□□□ -0.5
PEX3P28795 SUF2tP(AGG)C 72 nt11.91□□□□□ -0.5
PEX3P28795 SUF10tP(AGG)N 72 nt11.91□□□□□ -0.5
PEX3P28795 SIS1YNL007C 1059 nt11.91□□□□□ -0.5
PEX3P28795 SDH1YKL148C 1923 nt11.9□□□□□ -0.51
PEX3P28795 SHU1YHL006C 453 nt11.89□□□□□ -0.51
PEX3P28795 HOM6YJR139C 1080 nt11.85□□□□□ -0.51
PEX3P28795 IRC15YPL017C 1500 nt11.8□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms