RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeastyeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL6YGR261C MTC1P47018 478 aaKnown RBP8.97□□□□□ -0.97
APL6YGR261C RQC2Q12532 1038 aaKnown RBP8.88□□□□□ -0.99
APL6YGR261C DRS1P32892 752 aaKnown RBP8.85□□□□□ -0.99
APL6YGR261C TFA1P36100 482 aa8.65□□□□□ -1.02
APL6YGR261C TAF7Q05021 590 aa8.57□□□□□ -1.04
APL6YGR261C FAP1P53971 965 aa8.51□□□□□ -1.05
APL6YGR261C BFR2Q06631 534 aaKnown RBP8.2□□□□□ -1.1
APL6YGR261C PRY3P47033 881 aa8□□□□□ -1.13
APL6YGR261C AAD16Q02895 342 aa7.76□□□□□ -1.17
APL6YGR261C PRI1P10363 409 aa7.75□□□□□ -1.17
APL6YGR261C LEO1P38439 464 aa7.64□□□□□ -1.19
APL6YGR261C DMA1P38823 416 aa7.59□□□□□ -1.19
APL6YGR261C URN1Q06525 465 aaKnown RBP7.56□□□□□ -1.2
APL6YGR261C ISW2Q08773 1120 aa7.54□□□□□ -1.2
APL6YGR261C YCK3P39962 524 aa7.47□□□□□ -1.21
APL6YGR261C HAA1Q12753 694 aaKnown RBP7.47□□□□□ -1.21
APL6YGR261C RPG1P38249 964 aaKnown RBP7.46□□□□□ -1.22
APL6YGR261C AVT3P36062 692 aa7.44□□□□□ -1.22
APL6YGR261C NAP1P25293 417 aaKnown RBP7.34□□□□□ -1.23
APL6YGR261C TSR3Q12094 313 aaKnown RBP7.32□□□□□ -1.24
APL6YGR261C IOC4Q04213 475 aa7.29□□□□□ -1.24
APL6YGR261C IFH1P39520 1085 aa7.19□□□□□ -1.26
APL6YGR261C DIP2Q12220 943 aaPredicted RBP7.18□□□□□ -1.26
APL6YGR261C AIM44Q99299 758 aa7.18□□□□□ -1.26
APL6YGR261C YRB30P53107 440 aaPredicted RBP7.08□□□□□ -1.28
APL6YGR261C LEU3P08638 886 aa7.08□□□□□ -1.28
APL6YGR261C ORC1P54784 914 aaPredicted RBP7.07□□□□□ -1.28
APL6YGR261C MRPL32P25348 183 aa7.05□□□□□ -1.28
APL6YGR261C RSE1Q04693 1361 aaKnown RBP7.04□□□□□ -1.28
APL6YGR261C ABP1P15891 592 aaKnown RBP7.01□□□□□ -1.29
APL6YGR261C DMA2P53924 522 aa6.98□□□□□ -1.29
APL6YGR261C TOP1P04786 769 aa6.91□□□□□ -1.3
APL6YGR261C SNU71P53207 620 aaKnown RBP6.89□□□□□ -1.31
APL6YGR261C RLF2Q12495 606 aa6.88□□□□□ -1.31
APL6YGR261C SIS2P36024 562 aa6.87□□□□□ -1.31
APL6YGR261C YFR016CP43597 1233 aaKnown RBP6.87□□□□□ -1.31
APL6YGR261C REB1P21538 810 aa6.87□□□□□ -1.31
APL6YGR261C SAS10Q12136 610 aaPredicted RBP6.85□□□□□ -1.31
APL6YGR261C RPL17AP05740 184 aaKnown RBP6.85□□□□□ -1.31
APL6YGR261C RPL17BP46990 184 aaKnown RBP6.85□□□□□ -1.31
APL6YGR261C YGL015CP33199 130 aa6.84□□□□□ -1.31
APL6YGR261C KRI1P42846 591 aaKnown RBP6.81□□□□□ -1.32
APL6YGR261C RPN1P38764 993 aaKnown RBP6.72□□□□□ -1.33
APL6YGR261C PTP3P40048 928 aa6.69□□□□□ -1.34
APL6YGR261C MNN4P36044 1178 aa6.67□□□□□ -1.34
APL6YGR261C RPS0BP46654 252 aaKnown RBP6.66□□□□□ -1.34
APL6YGR261C SWE1P32944 819 aa6.65□□□□□ -1.34
APL6YGR261C BRL1P38770 471 aa6.65□□□□□ -1.35
APL6YGR261C MDG1P53885 366 aa6.65□□□□□ -1.35
APL6YGR261C YML020WQ03722 664 aa6.65□□□□□ -1.35
APL6YGR261C NOP8Q08287 484 aaPredicted RBP6.65□□□□□ -1.35
APL6YGR261C EBP2P36049 427 aaKnown RBP6.64□□□□□ -1.35
APL6YGR261C ATG36P46983 293 aa6.62□□□□□ -1.35
APL6YGR261C CDC27P38042 758 aa6.6□□□□□ -1.35
APL6YGR261C NUG1P40010 520 aaKnown RBP6.59□□□□□ -1.35
APL6YGR261C GIN4Q12263 1142 aa6.59□□□□□ -1.35
APL6YGR261C CKB1P43639 278 aa6.58□□□□□ -1.36
APL6YGR261C CWC22P53333 577 aaKnown RBP6.57□□□□□ -1.36
APL6YGR261C LAM6Q08001 693 aa6.52□□□□□ -1.36
APL6YGR261C TPO2P53283 614 aa6.51□□□□□ -1.37
APL6YGR261C SUB1P54000 292 aaKnown RBP6.51□□□□□ -1.37
APL6YGR261C VPS72Q03388 795 aa6.51□□□□□ -1.37
APL6YGR261C ASF1P32447 279 aa6.5□□□□□ -1.37
APL6YGR261C CAB3P36076 571 aa6.5□□□□□ -1.37
APL6YGR261C YKR023WP36119 530 aaKnown RBP6.5□□□□□ -1.37
APL6YGR261C SPT21P35209 758 aa6.49□□□□□ -1.37
APL6YGR261C NOP7P53261 605 aaKnown RBP6.49□□□□□ -1.37
APL6YGR261C SLX8P40072 274 aa6.48□□□□□ -1.37
APL6YGR261C UBP10P53874 792 aaPredicted RBP6.48□□□□□ -1.37
APL6YGR261C FAR11P53917 953 aa6.48□□□□□ -1.37
APL6YGR261C RLP24Q07915 199 aaKnown RBP6.48□□□□□ -1.37
APL6YGR261C RTS3P53289 263 aa6.46□□□□□ -1.38
APL6YGR261C MAP2P38174 421 aaKnown RBP6.45□□□□□ -1.38
APL6YGR261C TOA1P32773 286 aa6.45□□□□□ -1.38
APL6YGR261C OSW7P43611 510 aa6.45□□□□□ -1.38
APL6YGR261C BRN1P38170 754 aa6.44□□□□□ -1.38
APL6YGR261C DOS2P54858 310 aa6.44□□□□□ -1.38
APL6YGR261C SPC42P36094 363 aa6.43□□□□□ -1.38
APL6YGR261C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
APL6YGR261C SSP1P38871 571 aa6.42□□□□□ -1.38
APL6YGR261C BUD31P25337 157 aaPredicted RBP6.41□□□□□ -1.38
APL6YGR261C HIF1Q12373 385 aa6.41□□□□□ -1.38
APL6YGR261C MRX12P47084 519 aa6.4□□□□□ -1.39
APL6YGR261C YJR008WP47085 338 aa6.39□□□□□ -1.39
APL6YGR261C PSH1Q12161 406 aa6.39□□□□□ -1.39
APL6YGR261C YTA7P40340 1379 aa6.39□□□□□ -1.39
APL6YGR261C HOP09932 586 aa6.39□□□□□ -1.39
APL6YGR261C PAM1P37304 830 aaKnown RBP6.38□□□□□ -1.39
APL6YGR261C SSF1P38789 453 aaPredicted RBP6.38□□□□□ -1.39
APL6YGR261C BUD21Q08492 214 aaPredicted RBP6.38□□□□□ -1.39
APL6YGR261C TFC8Q12308 588 aa6.37□□□□□ -1.39
APL6YGR261C DCD1P06773 312 aa6.37□□□□□ -1.39
APL6YGR261C GEF1P37020 779 aa6.37□□□□□ -1.39
APL6YGR261C SSA1P10591 642 aaKnown RBP6.35□□□□□ -1.39
APL6YGR261C ISW1P38144 1129 aa6.35□□□□□ -1.39
APL6YGR261C PDR1P12383 1068 aa6.35□□□□□ -1.39
APL6YGR261C MET10P39692 1035 aa6.34□□□□□ -1.39
APL6YGR261C MAM3Q12296 706 aa6.33□□□□□ -1.4
APL6YGR261C NAB3P38996 802 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
APL6YGR261C ZDS1P50111 915 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms