RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W TFC3P34111 1160 aa2.89□□□□□ -1.95
CTK3YML112W RFC1P38630 861 aaKnown RBP2.89□□□□□ -1.95
CTK3YML112W YJL070CP40361 888 aa2.89□□□□□ -1.95
CTK3YML112W IAH1P41734 238 aa2.89□□□□□ -1.95
CTK3YML112W ARC35P53731 342 aaKnown RBP2.89□□□□□ -1.95
CTK3YML112W MAK10Q02197 733 aa2.89□□□□□ -1.95
CTK3YML112W RSF1Q05043 376 aa2.89□□□□□ -1.95
CTK3YML112W RTT103Q05543 409 aa2.89□□□□□ -1.95
CTK3YML112W CIA1Q05583 330 aa2.89□□□□□ -1.95
CTK3YML112W BSC1Q12140 328 aa2.89□□□□□ -1.95
CTK3YML112W ERG27Q12452 347 aaKnown RBP2.89□□□□□ -1.95
CTK3YML112W EDE1P34216 1381 aa2.88□□□□□ -1.95
CTK3YML112W YML002WP0CF17 737 aa2.88□□□□□ -1.95
CTK3YML112W APA1P16550 321 aaKnown RBP2.88□□□□□ -1.95
CTK3YML112W STV1P37296 890 aa2.88□□□□□ -1.95
CTK3YML112W RTS2P40962 232 aa2.88□□□□□ -1.95
CTK3YML112W YFR020WP43600 232 aa2.88□□□□□ -1.95
CTK3YML112W CRZ1P53968 678 aa2.88□□□□□ -1.95
CTK3YML112W FCP1Q03254 732 aa2.88□□□□□ -1.95
CTK3YML112W YDR415CQ04033 374 aaPredicted RBP2.88□□□□□ -1.95
CTK3YML112W PGI1P12709 554 aaKnown RBP2.87□□□□□ -1.95
CTK3YML112W UBC1P21734 215 aaKnown RBP2.87□□□□□ -1.95
CTK3YML112W CDC15P27636 974 aa2.87□□□□□ -1.95
CTK3YML112W RAD16P31244 790 aa2.87□□□□□ -1.95
CTK3YML112W ESL2P36168 1195 aa2.87□□□□□ -1.95
CTK3YML112W RIM2P38127 377 aa2.87□□□□□ -1.95
CTK3YML112W IFA38P38286 347 aa2.87□□□□□ -1.95
CTK3YML112W IST3P40565 148 aaPredicted RBP2.87□□□□□ -1.95
CTK3YML112W YIR014WP40570 242 aa2.87□□□□□ -1.95
CTK3YML112W BLS1Q06071 122 aa2.87□□□□□ -1.95
CTK3YML112W YDL218WQ07629 317 aa2.87□□□□□ -1.95
CTK3YML112W MTF2P10849 440 aa2.86□□□□□ -1.95
CTK3YML112W PMS1P14242 873 aa2.86□□□□□ -1.95
CTK3YML112W GID7P25569 745 aa2.86□□□□□ -1.95
CTK3YML112W PFK26P40433 827 aaKnown RBP2.86□□□□□ -1.95
CTK3YML112W YIL060WP40519 144 aa2.86□□□□□ -1.95
CTK3YML112W NNF2P53253 936 aa2.86□□□□□ -1.95
CTK3YML112W IST1P53843 298 aaPredicted RBP2.86□□□□□ -1.95
CTK3YML112W UBX4P54730 416 aa2.86□□□□□ -1.95
CTK3YML112W DAP1Q12091 152 aa2.86□□□□□ -1.95
CTK3YML112W GLN3P18494 730 aa2.85□□□□□ -1.95
CTK3YML112W ERG8P24521 451 aa2.85□□□□□ -1.95
CTK3YML112W GAC1P28006 793 aa2.85□□□□□ -1.95
CTK3YML112W RGI2P40188 164 aa2.85□□□□□ -1.95
CTK3YML112W SMK1P41808 388 aa2.85□□□□□ -1.95
CTK3YML112W FET5P43561 622 aa2.85□□□□□ -1.95
CTK3YML112W NUP100Q02629 959 aa2.85□□□□□ -1.95
CTK3YML112W CSR1Q06705 408 aaKnown RBP2.85□□□□□ -1.95
CTK3YML112W YOL057WQ08225 711 aa2.85□□□□□ -1.95
CTK3YML112W CSR2Q12734 1121 aa2.85□□□□□ -1.95
CTK3YML112W HXK2P04807 486 aaKnown RBP2.84□□□□□ -1.95
CTK3YML112W PDA1P16387 420 aaKnown RBP2.84□□□□□ -1.95
CTK3YML112W PFK2P16862 959 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
CTK3YML112W DBF20P32328 564 aa2.84□□□□□ -1.95
CTK3YML112W MIA40P36046 403 aa2.84□□□□□ -1.95
CTK3YML112W ERG7P38604 731 aa2.84□□□□□ -1.95
CTK3YML112W PHO90P39535 881 aa2.84□□□□□ -1.95
CTK3YML112W AZF1P41696 914 aa2.84□□□□□ -1.95
CTK3YML112W SMC3P47037 1230 aa2.84□□□□□ -1.95
CTK3YML112W CTF18P49956 741 aa2.84□□□□□ -1.95
CTK3YML112W YNR061CP53747 219 aa2.84□□□□□ -1.95
CTK3YML112W REG1Q00816 1014 aa2.84□□□□□ -1.95
CTK3YML112W YMR178WQ03219 274 aaKnown RBP2.84□□□□□ -1.95
CTK3YML112W TFC6Q06339 672 aa2.84□□□□□ -1.95
CTK3YML112W YOL159CQ08300 171 aa2.84□□□□□ -1.95
CTK3YML112W YOR019WQ99248 730 aa2.84□□□□□ -1.95
CTK3YML112W VCX1Q99385 411 aa2.84□□□□□ -1.95
CTK3YML112W PRO3P32263 286 aaKnown RBP2.83□□□□□ -1.96
CTK3YML112W XRS2P33301 854 aa2.83□□□□□ -1.96
CTK3YML112W PSD1P39006 500 aa2.83□□□□□ -1.96
CTK3YML112W DHH1P39517 506 aaKnown RBP2.83□□□□□ -1.96
CTK3YML112W PKP1P40530 394 aa2.83□□□□□ -1.96
CTK3YML112W ATG26Q06321 1198 aa2.83□□□□□ -1.96
CTK3YML112W PSR2Q07949 397 aa2.83□□□□□ -1.96
CTK3YML112W NUS1Q12063 375 aa2.83□□□□□ -1.96
CTK3YML112W TEF4P36008 412 aaKnown RBP2.82□□□□□ -1.96
CTK3YML112W MIC60P36112 540 aa2.82□□□□□ -1.96
CTK3YML112W ARP1P38696 384 aa2.82□□□□□ -1.96
CTK3YML112W UME6P39001 836 aa2.82□□□□□ -1.96
CTK3YML112W YJL068CP40363 299 aa2.82□□□□□ -1.96
CTK3YML112W IME4P41833 600 aa2.82□□□□□ -1.96
CTK3YML112W DPB11P47027 764 aaPredicted RBP2.82□□□□□ -1.96
CTK3YML112W VPS4P52917 437 aa2.82□□□□□ -1.96
CTK3YML112W PKP2P53170 491 aa2.82□□□□□ -1.96
CTK3YML112W APL4Q12028 832 aa2.82□□□□□ -1.96
CTK3YML112W ATG9Q12142 997 aa2.82□□□□□ -1.96
CTK3YML112W YLR302CO13544 120 aa2.81□□□□□ -1.96
CTK3YML112W YBR085C-AO43137 85 aa2.81□□□□□ -1.96
CTK3YML112W LCB1P25045 558 aaKnown RBP2.81□□□□□ -1.96
CTK3YML112W PTH2P34222 208 aa2.81□□□□□ -1.96
CTK3YML112W DIM1P41819 318 aaKnown RBP2.81□□□□□ -1.96
CTK3YML112W GUF1P46943 645 aa2.81□□□□□ -1.96
CTK3YML112W STR3P53101 465 aaKnown RBP2.81□□□□□ -1.96
CTK3YML112W RRT6P53117 311 aaPredicted RBP2.81□□□□□ -1.96
CTK3YML112W IMP4P53941 290 aaKnown RBP2.81□□□□□ -1.96
CTK3YML112W ADE13Q05911 482 aaKnown RBP2.81□□□□□ -1.96
CTK3YML112W PSK2Q08217 1101 aa2.81□□□□□ -1.96
CTK3YML112W RDR1Q08904 546 aa2.81□□□□□ -1.96
CTK3YML112W TRM8Q12009 286 aa2.81□□□□□ -1.96
CTK3YML112W YBR298C-AQ8TGK4 73 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms