RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C VID30P53076 958 aa3.45□□□□□ -1.86
TOP1YOL006C PUS2P53167 370 aa3.45□□□□□ -1.86
TOP1YOL006C MPP6P53725 186 aaPredicted RBP3.45□□□□□ -1.86
TOP1YOL006C INN1P53901 409 aa3.45□□□□□ -1.86
TOP1YOL006C RCR2Q03446 210 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C SEG1Q04279 960 aa3.45□□□□□ -1.86
TOP1YOL006C HRK1Q08732 759 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C BUD7Q08754 746 aa3.45□□□□□ -1.86
TOP1YOL006C TRE1Q08919 783 aa3.45□□□□□ -1.86
TOP1YOL006C SUL2Q12325 893 aa3.45□□□□□ -1.86
TOP1YOL006C CBP2P03874 630 aaPredicted RBP3.45□□□□□ -1.86
TOP1YOL006C LPD1P09624 499 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C PRP6P19735 899 aaPredicted RBP3.45□□□□□ -1.86
TOP1YOL006C PRP2P20095 876 aaPredicted RBP3.45□□□□□ -1.86
TOP1YOL006C RPS7AP26786 190 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C AFG1P32317 509 aa3.45□□□□□ -1.86
TOP1YOL006C COT1P32798 439 aa3.45□□□□□ -1.86
TOP1YOL006C YPT7P32939 208 aa3.45□□□□□ -1.86
TOP1YOL006C KES1P35844 434 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C TPO5P36029 618 aa3.45□□□□□ -1.86
TOP1YOL006C THI2P38141 450 aa3.45□□□□□ -1.86
TOP1YOL006C SLX1P38324 304 aa3.45□□□□□ -1.86
TOP1YOL006C MSG5P38590 489 aa3.45□□□□□ -1.86
TOP1YOL006C KSP1P38691 1029 aaKnown RBP3.45□□□□□ -1.86
TOP1YOL006C SLZ1P40167 298 aa3.45□□□□□ -1.86
TOP1YOL006C UTP18P40362 594 aaPredicted RBP3.45□□□□□ -1.86
TOP1YOL006C YIL077CP40508 320 aa3.45□□□□□ -1.86
TOP1YOL006C YJL045WP47052 634 aa3.45□□□□□ -1.86
TOP1YOL006C ASE1P50275 885 aa3.45□□□□□ -1.86
TOP1YOL006C MUB1Q03162 620 aa3.45□□□□□ -1.86
TOP1YOL006C VPS20Q04272 221 aa3.45□□□□□ -1.86
TOP1YOL006C BOP2Q06150 570 aa3.45□□□□□ -1.86
TOP1YOL006C TMA16Q08687 178 aa3.45□□□□□ -1.86
TOP1YOL006C LDB17Q12342 491 aa3.45□□□□□ -1.86
TOP1YOL006C SPE4Q12455 300 aa3.45□□□□□ -1.86
TOP1YOL006C NBL1Q3E7Y6 73 aa3.45□□□□□ -1.86
TOP1YOL006C YPT6Q99260 215 aa3.45□□□□□ -1.86
TOP1YOL006C RAD61Q99359 647 aa3.45□□□□□ -1.86
TOP1YOL006C RPS9BP05755 195 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C PRB1P09232 635 aa3.44□□□□□ -1.86
TOP1YOL006C CLC1P17891 233 aa3.44□□□□□ -1.86
TOP1YOL006C EMC1P25574 760 aa3.44□□□□□ -1.86
TOP1YOL006C MGM101P32787 269 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C AUR1P36107 401 aaPredicted RBP3.44□□□□□ -1.86
TOP1YOL006C ECM4P36156 370 aa3.44□□□□□ -1.86
TOP1YOL006C VFA1P40080 203 aa3.44□□□□□ -1.86
TOP1YOL006C YTA12P40341 825 aa3.44□□□□□ -1.86
TOP1YOL006C FKH1P40466 484 aa3.44□□□□□ -1.86
TOP1YOL006C ULP2P40537 1034 aaPredicted RBP3.44□□□□□ -1.86
TOP1YOL006C SGN1P40561 250 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
TOP1YOL006C MMM1P41800 426 aa3.44□□□□□ -1.86
TOP1YOL006C ELP2P42935 788 aa3.44□□□□□ -1.86
TOP1YOL006C YFR018CP43599 363 aa3.44□□□□□ -1.86
TOP1YOL006C DLD2P46681 530 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C TAH11P47112 604 aa3.44□□□□□ -1.86
TOP1YOL006C APT1P49435 187 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C UBP15P50101 1230 aa3.44□□□□□ -1.86
TOP1YOL006C MCM6P53091 1017 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C RRP46P53256 223 aaPredicted RBP3.44□□□□□ -1.86
TOP1YOL006C DSL1P53847 754 aa3.44□□□□□ -1.86
TOP1YOL006C TRS31Q03337 283 aa3.44□□□□□ -1.86
TOP1YOL006C YML037CQ03703 340 aa3.44□□□□□ -1.86
TOP1YOL006C UAF30Q08747 228 aa3.44□□□□□ -1.86
TOP1YOL006C HMI1Q12039 706 aa3.44□□□□□ -1.86
TOP1YOL006C TAF3Q12297 353 aa3.44□□□□□ -1.86
TOP1YOL006C YDR061WQ12298 539 aa3.44□□□□□ -1.86
TOP1YOL006C PET127P32606 800 aa3.44□□□□□ -1.86
TOP1YOL006C MTC7P32633 139 aa3.44□□□□□ -1.86
TOP1YOL006C CBF5P33322 483 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
TOP1YOL006C PGM1P33401 570 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C CMC1P36064 111 aa3.44□□□□□ -1.86
TOP1YOL006C MRPL37P36532 105 aa3.44□□□□□ -1.86
TOP1YOL006C SLM4P38247 162 aa3.44□□□□□ -1.86
TOP1YOL006C TCD1P38756 429 aa3.44□□□□□ -1.86
TOP1YOL006C CCT6P39079 546 aa3.44□□□□□ -1.86
TOP1YOL006C MNN9P39107 395 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C YIR014WP40570 242 aa3.44□□□□□ -1.86
TOP1YOL006C DUS1P53759 423 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C YNL143CP53908 130 aa3.44□□□□□ -1.86
TOP1YOL006C YLR297WQ05899 129 aa3.44□□□□□ -1.86
TOP1YOL006C ECM7Q06200 448 aa3.44□□□□□ -1.86
TOP1YOL006C BCP1Q06338 283 aa3.44□□□□□ -1.86
TOP1YOL006C GSH2Q08220 491 aa3.44□□□□□ -1.86
TOP1YOL006C ULA1Q12059 462 aa3.44□□□□□ -1.86
TOP1YOL006C AHC1Q12433 566 aa3.44□□□□□ -1.86
TOP1YOL006C ERG27Q12452 347 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C KOG1P38873 1557 aa3.44□□□□□ -1.86
TOP1YOL006C YLR278CQ05854 1341 aa3.44□□□□□ -1.86
TOP1YOL006C IKI3Q06706 1349 aaKnown RBP3.44□□□□□ -1.86
TOP1YOL006C HMG2P12684 1045 aa3.43□□□□□ -1.86
TOP1YOL006C SNF5P18480 905 aa3.43□□□□□ -1.86
TOP1YOL006C BOS1P25385 244 aa3.43□□□□□ -1.86
TOP1YOL006C NTH1P32356 751 aa3.43□□□□□ -1.86
TOP1YOL006C RPD3P32561 433 aa3.43□□□□□ -1.86
TOP1YOL006C PMT1P33775 817 aa3.43□□□□□ -1.86
TOP1YOL006C YBL055CP34220 418 aaPredicted RBP3.43□□□□□ -1.86
TOP1YOL006C SAP30P38429 201 aa3.43□□□□□ -1.86
TOP1YOL006C SSO2P39926 295 aa3.43□□□□□ -1.86
TOP1YOL006C IAH1P41734 238 aa3.43□□□□□ -1.86
TOP1YOL006C LOC1P43586 204 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms