RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	UBP2	Q01476	1272 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	RPL6A	Q02326	176 aa	Known RBP	5.18	□□□□□ -1.58
SIS2	YKR072C	MUB1	Q03162	620 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	ARX1	Q03862	593 aa	Known RBP	5.18	□□□□□ -1.58
SIS2	YKR072C	MCP2	Q06567	569 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	YEH1	Q07804	573 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	TMA16	Q08687	178 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	TCO89	Q08921	799 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	SVS1	Q12254	260 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	PFK27	Q12471	397 aa	Predicted RBP	5.18	□□□□□ -1.58
SIS2	YKR072C	VCX1	Q99385	411 aa		5.18	□□□□□ -1.58
SIS2	YKR072C	RPL1A	P0CX43	217 aa	Known RBP	5.17	□□□□□ -1.58
SIS2	YKR072C	RPL1B	P0CX44	217 aa	Known RBP	5.17	□□□□□ -1.58
SIS2	YKR072C	DIT1	P21623	536 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	RPS7A	P26786	190 aa	Known RBP	5.17	□□□□□ -1.58
SIS2	YKR072C	YUH1	P35127	236 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	AUR1	P36107	401 aa	Predicted RBP	5.17	□□□□□ -1.58
SIS2	YKR072C	ERC1	P38767	581 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	WSS1	P38838	269 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	ZRG8	P40021	1076 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	JHD1	P40034	492 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	CLA4	P48562	842 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	YGR111W	P53265	400 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	TAP42	Q04372	366 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	AIM6	Q07716	390 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	SGO1	Q08490	590 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	ATG29	Q12092	213 aa		5.17	□□□□□ -1.58
SIS2	YKR072C	MER1	P16523	270 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	CLC1	P17891	233 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	SYN8	P31377	255 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	MAL33	P38157	468 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	YSW1	P38280	609 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	PKP1	P40530	394 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	ALT2	P52892	507 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	NCS6	P53088	359 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	YBP2	P53169	641 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	YGR266W	P53326	701 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	INN1	P53901	409 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	KAP120	Q02932	1032 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	YMR265C	Q03508	461 aa	Known RBP	5.16	□□□□□ -1.58
SIS2	YKR072C	CLU1	Q03690	1277 aa	Known RBP	5.16	□□□□□ -1.58
SIS2	YKR072C	RQC1	Q05468	723 aa	Known RBP	5.16	□□□□□ -1.58
SIS2	YKR072C	ATG38	Q05789	226 aa	Known RBP	5.16	□□□□□ -1.58
SIS2	YKR072C	YSH1	Q06224	779 aa	Predicted RBP	5.16	□□□□□ -1.58
SIS2	YKR072C	DCI1	Q08558	271 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	YIL002W-A	Q3E7Z5	69 aa		5.16	□□□□□ -1.58
SIS2	YKR072C	GCD1	P09032	578 aa	Predicted RBP	5.15	□□□□□ -1.58
SIS2	YKR072C	PUT4	P15380	627 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	EST1	P17214	699 aa	Predicted RBP	5.15	□□□□□ -1.58
SIS2	YKR072C	PRE4	P30657	266 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	SEF1	P34228	1148 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	GPT2	P36148	743 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	ALK1	P43633	760 aa	Known RBP	5.15	□□□□□ -1.58
SIS2	YKR072C	MET12	P46151	657 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	MLC1	P53141	149 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	EGD1	Q02642	157 aa	Known RBP	5.15	□□□□□ -1.58
SIS2	YKR072C	SOV1	Q04748	898 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	YPT6	Q99260	215 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	BPT1	P14772	1559 aa		5.15	□□□□□ -1.58
SIS2	YKR072C	FBP1	P09201	348 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	CHS6	P40955	746 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	VMA13	P41807	478 aa	Known RBP	5.15	□□□□□ -1.59
SIS2	YKR072C	CUE3	P53137	624 aa	Known RBP	5.15	□□□□□ -1.59
SIS2	YKR072C	LSB1	P53281	241 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	MRD1	Q06106	887 aa	Known RBP	5.15	□□□□□ -1.59
SIS2	YKR072C	SWT1	Q12104	458 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	YRM1	Q12340	786 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	YOR019W	Q99248	730 aa		5.15	□□□□□ -1.59
SIS2	YKR072C	ATG2	P53855	1592 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	GAL7	P08431	366 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	ERG20	P08524	352 aa	Known RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	CAF20	P12962	161 aa	Known RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	PRP45	P28004	379 aa	Predicted RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	MET22	P32179	357 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	YPT7	P32939	208 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SIS2	YKR072C	YHR078W	P38799	552 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	SFB3	P38810	929 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	SAK1	P38990	1142 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	PZF1	P39933	429 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	DLD2	P46681	530 aa	Known RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	LYS4	P49367	693 aa	Predicted RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	LCL3	P53153	274 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	YGR130C	P53278	816 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	LSC1	P53598	329 aa	Known RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	RPA49	Q01080	415 aa	Predicted RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SIS2	YKR072C	REC102	Q02721	264 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	YML037C	Q03703	340 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	YDR239C	Q03780	787 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	VPS38	Q05919	439 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	KAP95	Q06142	861 aa	Known RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	VPS36	Q06696	566 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	CLP1	Q08685	445 aa	Predicted RBP	5.14	□□□□□ -1.59
SIS2	YKR072C	BUD7	Q08754	746 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	SPE4	Q12455	300 aa		5.14	□□□□□ -1.59
SIS2	YKR072C	DAP2	P18962	818 aa		5.13	□□□□□ -1.59
SIS2	YKR072C	MRPL25	P23369	157 aa		5.13	□□□□□ -1.59
SIS2	YKR072C	MRP4	P32902	394 aa		5.13	□□□□□ -1.59
SIS2	YKR072C	CMC1	P36064	111 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms