RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	FAP1	P53971	965 aa		11.38	□□□□□ -0.59
SIS2	YKR072C	DRS1	P32892	752 aa	Known RBP	10.88	□□□□□ -0.67
SIS2	YKR072C	PRY3	P47033	881 aa		10.79	□□□□□ -0.68
SIS2	YKR072C	MTC1	P47018	478 aa	Known RBP	10.27	□□□□□ -0.77
SIS2	YKR072C	YCK3	P39962	524 aa		10.22	□□□□□ -0.77
SIS2	YKR072C	TFA1	P36100	482 aa		10.06	□□□□□ -0.8
SIS2	YKR072C	HAA1	Q12753	694 aa	Known RBP	10.05	□□□□□ -0.8
SIS2	YKR072C	AAD16	Q02895	342 aa		9.94	□□□□□ -0.82
SIS2	YKR072C	BFR2	Q06631	534 aa	Known RBP	9.9	□□□□□ -0.83
SIS2	YKR072C	PRI1	P10363	409 aa		9.77	□□□□□ -0.85
SIS2	YKR072C	RQC2	Q12532	1038 aa	Known RBP	9.75	□□□□□ -0.85
SIS2	YKR072C	TAF7	Q05021	590 aa		9.26	□□□□□ -0.93
SIS2	YKR072C	TSR3	Q12094	313 aa	Known RBP	9.09	□□□□□ -0.95
SIS2	YKR072C	BUD31	P25337	157 aa	Predicted RBP	9.08	□□□□□ -0.96
SIS2	YKR072C	AVT3	P36062	692 aa		9.05	□□□□□ -0.96
SIS2	YKR072C	YGL015C	P33199	130 aa		8.94	□□□□□ -0.98
SIS2	YKR072C	ISW2	Q08773	1120 aa		8.91	□□□□□ -0.98
SIS2	YKR072C	RPG1	P38249	964 aa	Known RBP	8.89	□□□□□ -0.99
SIS2	YKR072C	DIP2	Q12220	943 aa	Predicted RBP	8.88	□□□□□ -0.99
SIS2	YKR072C	MRPL32	P25348	183 aa		8.74	□□□□□ -1.01
SIS2	YKR072C	DMA1	P38823	416 aa		8.7	□□□□□ -1.02
SIS2	YKR072C	LEO1	P38439	464 aa		8.56	□□□□□ -1.04
SIS2	YKR072C	SIS1	P25294	352 aa	Known RBP	8.41	□□□□□ -1.06
SIS2	YKR072C	RSE1	Q04693	1361 aa	Known RBP	8.09	□□□□□ -1.11
SIS2	YKR072C	PTP3	P40048	928 aa		8.08	□□□□□ -1.12
SIS2	YKR072C	LEU3	P08638	886 aa		8.06	□□□□□ -1.12
SIS2	YKR072C	UBP9	P39967	754 aa		8.03	□□□□□ -1.12
SIS2	YKR072C	UBP10	P53874	792 aa	Predicted RBP	8.02	□□□□□ -1.13
SIS2	YKR072C	CDC27	P38042	758 aa		7.99	□□□□□ -1.13
SIS2	YKR072C	MAP2	P38174	421 aa	Known RBP	7.95	□□□□□ -1.14
SIS2	YKR072C	SAS10	Q12136	610 aa	Predicted RBP	7.89	□□□□□ -1.15
SIS2	YKR072C	DMA2	P53924	522 aa		7.84	□□□□□ -1.15
SIS2	YKR072C	SSP1	P38871	571 aa		7.8	□□□□□ -1.16
SIS2	YKR072C	RPN1	P38764	993 aa	Known RBP	7.76	□□□□□ -1.17
SIS2	YKR072C	RLF2	Q12495	606 aa		7.74	□□□□□ -1.17
SIS2	YKR072C	RPL17A	P05740	184 aa	Known RBP	7.72	□□□□□ -1.17
SIS2	YKR072C	RPL17B	P46990	184 aa	Known RBP	7.72	□□□□□ -1.17
SIS2	YKR072C	TGL3	P40308	642 aa		7.7	□□□□□ -1.18
SIS2	YKR072C	REB1	P21538	810 aa		7.69	□□□□□ -1.18
SIS2	YKR072C	AIM44	Q99299	758 aa		7.68	□□□□□ -1.18
SIS2	YKR072C	TIF4632	P39936	914 aa	Known RBP	7.67	□□□□□ -1.18
SIS2	YKR072C	ABP1	P15891	592 aa	Known RBP	7.64	□□□□□ -1.19
SIS2	YKR072C	RIM101	P33400	625 aa		7.64	□□□□□ -1.19
SIS2	YKR072C	IFH1	P39520	1085 aa		7.6	□□□□□ -1.19
SIS2	YKR072C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
SIS2	YKR072C	CKB1	P43639	278 aa		7.56	□□□□□ -1.2
SIS2	YKR072C	NAP1	P25293	417 aa	Known RBP	7.53	□□□□□ -1.2
SIS2	YKR072C	YKR023W	P36119	530 aa	Known RBP	7.51	□□□□□ -1.21
SIS2	YKR072C	SPT21	P35209	758 aa		7.5	□□□□□ -1.21
SIS2	YKR072C	YAH1	Q12184	172 aa	Known RBP	7.48	□□□□□ -1.21
SIS2	YKR072C	SPB4	P25808	606 aa	Predicted RBP	7.46	□□□□□ -1.22
SIS2	YKR072C	SLX5	P32828	619 aa	Known RBP	7.45	□□□□□ -1.22
SIS2	YKR072C	OXP1	P28273	1286 aa		7.44	□□□□□ -1.22
SIS2	YKR072C	SCY1	P53009	804 aa		7.43	□□□□□ -1.22
SIS2	YKR072C	MGA2	P40578	1113 aa		7.42	□□□□□ -1.22
SIS2	YKR072C	YLR271W	Q06152	274 aa		7.42	□□□□□ -1.22
SIS2	YKR072C	IOC4	Q04213	475 aa		7.4	□□□□□ -1.23
SIS2	YKR072C	HGH1	P48362	394 aa	Known RBP	7.38	□□□□□ -1.23
SIS2	YKR072C	YIL055C	P40523	627 aa	Known RBP	7.36	□□□□□ -1.23
SIS2	YKR072C	ORC1	P54784	914 aa	Predicted RBP	7.36	□□□□□ -1.23
SIS2	YKR072C	DCD1	P06773	312 aa		7.34	□□□□□ -1.23
SIS2	YKR072C	TFC8	Q12308	588 aa		7.34	□□□□□ -1.23
SIS2	YKR072C	YML020W	Q03722	664 aa		7.32	□□□□□ -1.24
SIS2	YKR072C	YBL029C-A	Q3E756	94 aa		7.32	□□□□□ -1.24
SIS2	YKR072C	HO	P09932	586 aa		7.32	□□□□□ -1.24
SIS2	YKR072C	KIN1	P13185	1064 aa		7.29	□□□□□ -1.24
SIS2	YKR072C	VPS70	P47161	811 aa		7.28	□□□□□ -1.24
SIS2	YKR072C	NOP8	Q08287	484 aa	Predicted RBP	7.27	□□□□□ -1.25
SIS2	YKR072C	YPR148C	Q06523	435 aa		7.26	□□□□□ -1.25
SIS2	YKR072C	SET1	P38827	1080 aa	Known RBP	7.25	□□□□□ -1.25
SIS2	YKR072C	CST9	Q06032	482 aa		7.24	□□□□□ -1.25
SIS2	YKR072C	YNR021W	P53723	404 aa	Known RBP	7.23	□□□□□ -1.25
SIS2	YKR072C	SLX8	P40072	274 aa		7.22	□□□□□ -1.25
SIS2	YKR072C	RSM7	P47150	247 aa		7.22	□□□□□ -1.25
SIS2	YKR072C	DSF2	P38213	736 aa		7.22	□□□□□ -1.25
SIS2	YKR072C	AIR2	Q12476	344 aa	Known RBP	7.21	□□□□□ -1.26
SIS2	YKR072C	MST1	P07236	462 aa		7.19	□□□□□ -1.26
SIS2	YKR072C	VNX1	P42839	908 aa		7.18	□□□□□ -1.26
SIS2	YKR072C	YJL171C	P46992	396 aa		7.18	□□□□□ -1.26
SIS2	YKR072C	NOP7	P53261	605 aa	Known RBP	7.18	□□□□□ -1.26
SIS2	YKR072C	SSA1	P10591	642 aa	Known RBP	7.17	□□□□□ -1.26
SIS2	YKR072C	GEF1	P37020	779 aa		7.17	□□□□□ -1.26
SIS2	YKR072C	AIM7	Q12156	149 aa		7.16	□□□□□ -1.26
SIS2	YKR072C	PBS2	P08018	668 aa		7.15	□□□□□ -1.27
SIS2	YKR072C	RAM2	P29703	316 aa		7.13	□□□□□ -1.27
SIS2	YKR072C	GLC3	P32775	704 aa		7.13	□□□□□ -1.27
SIS2	YKR072C	GUA1	P38625	525 aa	Known RBP	7.11	□□□□□ -1.27
SIS2	YKR072C	FKH1	P40466	484 aa		7.1	□□□□□ -1.27
SIS2	YKR072C	PSD2	P53037	1138 aa	Known RBP	7.1	□□□□□ -1.27
SIS2	YKR072C	SPP1	Q03012	353 aa		7.08	□□□□□ -1.28
SIS2	YKR072C	SUB2	Q07478	446 aa	Known RBP	7.08	□□□□□ -1.28
SIS2	YKR072C	HPC2	Q01448	625 aa		7.06	□□□□□ -1.28
SIS2	YKR072C	SNU71	P53207	620 aa	Known RBP	7.06	□□□□□ -1.28
SIS2	YKR072C	RGA2	Q06407	1009 aa		7.06	□□□□□ -1.28
SIS2	YKR072C	MAM3	Q12296	706 aa		7.06	□□□□□ -1.28
SIS2	YKR072C	SLD2	P34252	453 aa		7.04	□□□□□ -1.28
SIS2	YKR072C	TOP1	P04786	769 aa		7.03	□□□□□ -1.28
SIS2	YKR072C	MAK21	Q12176	1025 aa	Known RBP	7.03	□□□□□ -1.28
SIS2	YKR072C	BCH2	P36122	765 aa		7.03	□□□□□ -1.28
SIS2	YKR072C	MRX12	P47084	519 aa		7.03	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms