RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	SDH8	P38345	138 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	DJP1	P40564	432 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	BST1	P43571	1029 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	CTF18	P49956	741 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	SAP4	P53036	818 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	YIP4	P53093	235 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	NMA2	P53204	395 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	YPL108W	Q02872	168 aa	Predicted RBP	4.69	□□□□□ -1.66
SHE1	YBL031W	NGL2	Q03264	515 aa	Known RBP	4.69	□□□□□ -1.66
SHE1	YBL031W	YDR179W-A	Q03983	463 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	YMR018W	Q04364	514 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	RSF2	P46974	1380 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	RPL22A	P05749	121 aa	Known RBP	4.68	□□□□□ -1.66
SHE1	YBL031W	OSM1	P21375	501 aa	Known RBP	4.68	□□□□□ -1.66
SHE1	YBL031W	OPI1	P21957	404 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	PRE2	P30656	287 aa	Known RBP	4.68	□□□□□ -1.66
SHE1	YBL031W	SPC110	P32380	944 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	ARP2	P32381	391 aa	Known RBP	4.68	□□□□□ -1.66
SHE1	YBL031W	RAD24	P32641	659 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	RRN3	P36070	627 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	NUP133	P36161	1157 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	PIH1	P38768	344 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	VID27	P40157	782 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	YGL242C	P53066	181 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	BUD17	P53727	317 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	ESF2	P53743	316 aa	Known RBP	4.68	□□□□□ -1.66
SHE1	YBL031W	MUK1	Q02866	612 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	YMR206W	Q03695	313 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	TFC6	Q06339	672 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	YDL073W	Q07454	984 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	TAF3	Q12297	353 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	LAM4	P38800	1345 aa		4.68	□□□□□ -1.66
SHE1	YBL031W	PET122	P10355	254 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	DMC1	P25453	334 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	CNE1	P27825	502 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	SLC1	P33333	303 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	MPE1	P35728	441 aa	Known RBP	4.67	□□□□□ -1.66
SHE1	YBL031W	TCD1	P38756	429 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	UME6	P39001	836 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	YJL206C	P39529	758 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	SDS3	P40505	327 aa		4.67	□□□□□ -1.66
SHE1	YBL031W	LGE1	Q02796	332 aa	Known RBP	4.67	□□□□□ -1.66
SHE1	YBL031W	STE4	P18851	423 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	TEF4	P36008	412 aa	Known RBP	4.66	□□□□□ -1.66
SHE1	YBL031W	LNP1	P38878	278 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	CIR1	P42940	261 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	CCT7	P42943	550 aa	Known RBP	4.66	□□□□□ -1.66
SHE1	YBL031W	RSC1	P53236	928 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	SPC98	P53540	846 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	TRS23	Q03784	219 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	VID22	Q05934	901 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	CRT10	Q08226	957 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	ICL2	Q12031	575 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	RIM20	Q12033	661 aa		4.66	□□□□□ -1.66
SHE1	YBL031W	SNU66	Q12420	587 aa	Predicted RBP	4.66	□□□□□ -1.66
SHE1	YBL031W	LPD1	P09624	499 aa	Known RBP	4.65	□□□□□ -1.67
SHE1	YBL031W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
SHE1	YBL031W	CDC43	P18898	376 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	PDE1	P22434	369 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	CDC5	P32562	705 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	AAP1	P37898	856 aa	Known RBP	4.65	□□□□□ -1.67
SHE1	YBL031W	RKM3	P38222	552 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	IFA38	P38286	347 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	UBS1	P38290	277 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	ARB1	P40024	610 aa	Known RBP	4.65	□□□□□ -1.67
SHE1	YBL031W	SKP2	P42843	763 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	STU2	P46675	888 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	STB4	P50104	949 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	VPS20	Q04272	221 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	CRF1	Q04930	467 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	YBR255C-A	Q3E776	120 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	YER175W-A	Q8TGU4	54 aa		4.65	□□□□□ -1.67
SHE1	YBL031W	AAC1	P04710	309 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	TPK1	P06244	397 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	SNF1	P06782	633 aa	Known RBP	4.64	□□□□□ -1.67
SHE1	YBL031W	KIN3	P22209	435 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	MCM10	P32354	571 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	NUP120	P35729	1037 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	MRPL10	P36520	322 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	BNA1	P47096	177 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	ARP5	P53946	755 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	GFD1	Q04839	188 aa	Known RBP	4.64	□□□□□ -1.67
SHE1	YBL031W	VAM6	Q07468	1049 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	ALE1	Q08548	619 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	SUL2	Q12325	893 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	MDM20	Q12387	796 aa	Known RBP	4.64	□□□□□ -1.67
SHE1	YBL031W	DDP1	Q99321	188 aa	Known RBP	4.64	□□□□□ -1.67
SHE1	YBL031W	SWI1	P09547	1314 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	YRF1-2	P40105	1681 aa		4.64	□□□□□ -1.67
SHE1	YBL031W	KGD2	P19262	463 aa	Predicted RBP	4.63	□□□□□ -1.67
SHE1	YBL031W	CHS3	P29465	1165 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	PRX1	P34227	261 aa	Known RBP	4.63	□□□□□ -1.67
SHE1	YBL031W	MUP3	P38734	546 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	YER010C	P40011	234 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	ATF1	P40353	525 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	ZAP1	P47043	880 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	NPA3	P47122	385 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	PSP1	P50896	841 aa	Known RBP	4.63	□□□□□ -1.67
SHE1	YBL031W	COQ6	P53318	479 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	CSL4	P53859	292 aa	Predicted RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms