RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Defb13Q8R2I4 64 aa5.71□□□□□ -1.49
Tpm1-213ENSMUST00000113697 PcloQ9QYX7 5068 aa5.71□□□□□ -1.5
Tpm1-213ENSMUST00000113697 A0A1Y7VJ07 166 aa5.71□□□□□ -1.5
Tpm1-213ENSMUST00000113697 Phxr4P15974 95 aa5.71□□□□□ -1.5
Tpm1-213ENSMUST00000113697 Gm9736A0A1W2P7N1 277 aa5.68□□□□□ -1.5
Tpm1-213ENSMUST00000113697 Spaca4Q80ZQ0 127 aa5.65□□□□□ -1.5
Tpm1-213ENSMUST00000113697 Mycbp2Q7TPH6 4711 aa5.64□□□□□ -1.51
Tpm1-213ENSMUST00000113697 Rps29P62274 56 aa5.64□□□□□ -1.51
Tpm1-213ENSMUST00000113697 Ndufb1P0DN34 57 aa5.62□□□□□ -1.51
Tpm1-213ENSMUST00000113697 1700042G07RikB1AUF7 90 aa5.6□□□□□ -1.51
Tpm1-213ENSMUST00000113697 Herc1E9PZP8 4859 aa5.6□□□□□ -1.51
Tpm1-213ENSMUST00000113697 Limd2Q8BGB5 128 aa5.58□□□□□ -1.52
Tpm1-213ENSMUST00000113697 Gm20661K7N787 53 aa5.57□□□□□ -1.52
Tpm1-213ENSMUST00000113697 Defb38Q7TNV7 63 aa5.56□□□□□ -1.52
Tpm1-213ENSMUST00000113697 Gm26620Q9CY65 116 aa5.55□□□□□ -1.52
Tpm1-213ENSMUST00000113697 Uqcr11Q9CPX8 56 aa5.54□□□□□ -1.52
Tpm1-213ENSMUST00000113697 Gm21798J3QNU5 87 aa5.54□□□□□ -1.52
Tpm1-213ENSMUST00000113697 4933415A04RikQ9D443 101 aa5.52□□□□□ -1.53
Tpm1-213ENSMUST00000113697 Lrp2A2ARV4 4660 aa5.51□□□□□ -1.53
Tpm1-213ENSMUST00000113697 Gm10999F6Q4M4 69 aa5.49□□□□□ -1.53
Tpm1-213ENSMUST00000113697 4930507D05RikQ8C9C9 103 aa5.48□□□□□ -1.53
Tpm1-213ENSMUST00000113697 SptssbQ925E8 76 aa5.48□□□□□ -1.53
Tpm1-213ENSMUST00000113697 Gm5965D3Z724 196 aa5.48□□□□□ -1.53
Tpm1-213ENSMUST00000113697 Q8BGJ3 129 aa5.46□□□□□ -1.54
Tpm1-213ENSMUST00000113697 2310034C09RikQ9D746 214 aa5.46□□□□□ -1.54
Tpm1-213ENSMUST00000113697 A030003K21RikA0A1Y7VIM3 128 aa5.45□□□□□ -1.54
Tpm1-213ENSMUST00000113697 A930033H14RikG5E8X6 103 aa5.45□□□□□ -1.54
Tpm1-213ENSMUST00000113697 A030014E15RikA0A1Y7VJV2 120 aa5.43□□□□□ -1.54
Tpm1-213ENSMUST00000113697 Krtap1-3A2A588 173 aa5.43□□□□□ -1.54
Tpm1-213ENSMUST00000113697 2310079G19RikQ9D6L6 185 aa5.4□□□□□ -1.54
Tpm1-213ENSMUST00000113697 Gm5767A0A0J9YTU8 78 aa5.39□□□□□ -1.55
Tpm1-213ENSMUST00000113697 Lce1lQ9D1G7 135 aa5.38□□□□□ -1.55
Tpm1-213ENSMUST00000113697 Gm4491E0CX42 125 aa5.37□□□□□ -1.55
Tpm1-213ENSMUST00000113697 Gm20538F6Z9R1 75 aa5.34□□□□□ -1.56
Tpm1-213ENSMUST00000113697 Gm7735D3YX18 52 aa5.32□□□□□ -1.56
Tpm1-213ENSMUST00000113697 Prm1P02319 51 aa5.32□□□□□ -1.56
Tpm1-213ENSMUST00000113697 4932415D10RikA0A1W2P6U8 4986 aa5.32□□□□□ -1.56
Tpm1-213ENSMUST00000113697 Ush2AQ2QI47 5193 aa5.31□□□□□ -1.56
Tpm1-213ENSMUST00000113697 Gm9789Q8BIG3 52 aa5.28□□□□□ -1.56
Tpm1-213ENSMUST00000113697 Defb1P56386 69 aa5.25□□□□□ -1.57
Tpm1-213ENSMUST00000113697 Rpl37Q9D823 97 aa5.22□□□□□ -1.57
Tpm1-213ENSMUST00000113697 Hmcn2A2AJ76 5100 aa5.22□□□□□ -1.57
Tpm1-213ENSMUST00000113697 Gm10100J3QK64 120 aa5.21□□□□□ -1.58
Tpm1-213ENSMUST00000113697 Cox6b2Q80ZN9 88 aa5.2□□□□□ -1.58
Tpm1-213ENSMUST00000113697 Ndufs5Q99LY9 106 aa5.2□□□□□ -1.58
Tpm1-213ENSMUST00000113697 Ubr4A2AN08 5180 aa5.19□□□□□ -1.58
Tpm1-213ENSMUST00000113697 Gm6217A0A1Y7VJK9 128 aa5.14□□□□□ -1.59
Tpm1-213ENSMUST00000113697 A0A286YCP9 139 aa5.12□□□□□ -1.59
Tpm1-213ENSMUST00000113697 Gm17416Q30KP4 66 aa5.12□□□□□ -1.59
Tpm1-213ENSMUST00000113697 Pla2g10Q9QXX3 151 aa5.11□□□□□ -1.59
Tpm1-213ENSMUST00000113697 Gm17606F6ZL36 78 aa5.1□□□□□ -1.59
Tpm1-213ENSMUST00000113697 Crct1Q6PAI5 102 aa5.09□□□□□ -1.59
Tpm1-213ENSMUST00000113697 Krtap17-1A2A5X6 109 aa5.07□□□□□ -1.6
Tpm1-213ENSMUST00000113697 Gm9955Q8CEJ8 102 aa5.05□□□□□ -1.6
Tpm1-213ENSMUST00000113697 Krtap9-5A2A5X3 358 aa5□□□□□ -1.61
Tpm1-213ENSMUST00000113697 Gm10318A0A1W2P728 225 aa4.97□□□□□ -1.61
Tpm1-213ENSMUST00000113697 Gm20537G3UYK7 97 aa4.97□□□□□ -1.61
Tpm1-213ENSMUST00000113697 Camk2n1Q6QWF9 78 aa4.97□□□□□ -1.61
Tpm1-213ENSMUST00000113697 Krtap16-3Q8C1I6 86 aa4.97□□□□□ -1.61
Tpm1-213ENSMUST00000113697 ZanO88799 5376 aa4.96□□□□□ -1.62
Tpm1-213ENSMUST00000113697 Krtap19-1Q925H2 87 aa4.94□□□□□ -1.62
Tpm1-213ENSMUST00000113697 Krtap19-3Q925H6 87 aa4.94□□□□□ -1.62
Tpm1-213ENSMUST00000113697 B930094E09RikQ8C4T2 136 aa4.92□□□□□ -1.62
Tpm1-213ENSMUST00000113697 Gm10382Q3V0T5 144 aa4.92□□□□□ -1.62
Tpm1-213ENSMUST00000113697 Fat4Q2PZL6 4981 aa4.88□□□□□ -1.63
Tpm1-213ENSMUST00000113697 Gm3880A0A1B0GSB3 72 aa4.86□□□□□ -1.63
Tpm1-213ENSMUST00000113697 Rnf213E9Q555 5152 aaKnown RBP4.85□□□□□ -1.63
Tpm1-213ENSMUST00000113697 Krtap13-1Q8K198 168 aa4.83□□□□□ -1.64
Tpm1-213ENSMUST00000113697 BC029722A0A0N4SW31 51 aa4.81□□□□□ -1.64
Tpm1-213ENSMUST00000113697 Gm12216A0A1W2P827 62 aa4.81□□□□□ -1.64
Tpm1-213ENSMUST00000113697 Mp68P56379 58 aa4.8□□□□□ -1.64
Tpm1-213ENSMUST00000113697 Gm11562A0PK51 136 aa4.77□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Krtap1-5A2A590 122 aa4.77□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Krtap1-4Q3V2D6 188 aa4.77□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Romo1P60603 79 aa4.76□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Gm17402F6Z0L5 76 aa4.75□□□□□ -1.65
Tpm1-213ENSMUST00000113697 2300003K06RikA2A4M0 262 aa4.75□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Gm10142J3KMP7 120 aa4.72□□□□□ -1.65
Tpm1-213ENSMUST00000113697 Gm10061D3Z714 54 aa4.7□□□□□ -1.66
Tpm1-213ENSMUST00000113697 Krtap12-1Q9Z287 130 aa4.69□□□□□ -1.66
Tpm1-213ENSMUST00000113697 Lce1dQ9D731 133 aa4.66□□□□□ -1.66
Tpm1-213ENSMUST00000113697 SspoQ8CG65 4998 aa4.64□□□□□ -1.67
Tpm1-213ENSMUST00000113697 Gm19426M0QWC7 77 aa4.64□□□□□ -1.67
Tpm1-213ENSMUST00000113697 Gm11569B1AQB1 180 aa4.62□□□□□ -1.67
Tpm1-213ENSMUST00000113697 CriptO70333 101 aa4.55□□□□□ -1.68
Tpm1-213ENSMUST00000113697 Gm9112A2AI92 75 aa4.49□□□□□ -1.69
Tpm1-213ENSMUST00000113697 Sprr2a3Q4KL71 83 aa4.49□□□□□ -1.69
Tpm1-213ENSMUST00000113697 Sprr2a1Q9CQK8 83 aa4.49□□□□□ -1.69
Tpm1-213ENSMUST00000113697 Syne2Q6ZWQ0 6874 aaKnown RBP4.49□□□□□ -1.69
Tpm1-213ENSMUST00000113697 Spink7Q6IE32 76 aa4.49□□□□□ -1.69
Tpm1-213ENSMUST00000113697 Gm40193A0A1B0GT39 78 aa4.43□□□□□ -1.7
Tpm1-213ENSMUST00000113697 Krtap19-2Q925I0 141 aa4.43□□□□□ -1.7
Tpm1-213ENSMUST00000113697 Ndufaf8A2AMZ4 74 aa4.4□□□□□ -1.71
Tpm1-213ENSMUST00000113697 Gm11596B1AQB0 205 aa4.38□□□□□ -1.71
Tpm1-213ENSMUST00000113697 Gm10272F7CZ33 110 aa4.36□□□□□ -1.71
Tpm1-213ENSMUST00000113697 Krtap19-9aF8WH65 55 aa4.35□□□□□ -1.71
Tpm1-213ENSMUST00000113697 Muc5bE9Q5I3 4800 aa4.31□□□□□ -1.72
Tpm1-213ENSMUST00000113697 Mt3P28184 68 aa4.3□□□□□ -1.72
Tpm1-213ENSMUST00000113697 Krtap4-6Q3V4B7 195 aa4.29□□□□□ -1.72
Tpm1-213ENSMUST00000113697 Krtap7-1Q9D3I6 87 aa4.29□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms