RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Chic1Q8CBW7 227 aa23.38■■□□□ 1.33
Tpm1-213ENSMUST00000113697 Plppr3Q7TPB0 716 aa21.58■■□□□ 1.04
Tpm1-213ENSMUST00000113697 Mapk8ip2Q9ERE9 830 aa21.55■■□□□ 1.04
Tpm1-213ENSMUST00000113697 Gm35339A0A140LHH9 1649 aa21.35■■□□□ 1.01
Tpm1-213ENSMUST00000113697 Phf23Q8BSN5 401 aa21.29■■□□□ 1
Tpm1-213ENSMUST00000113697 NischQ80TM9 1593 aa21.14■□□□□ 0.97
Tpm1-213ENSMUST00000113697 Kcna4Q61423 654 aa20.81■□□□□ 0.92
Tpm1-213ENSMUST00000113697 Gab3Q8BSM5 595 aa20.7■□□□□ 0.9
Tpm1-213ENSMUST00000113697 Abcc9P70170 1546 aa20.52■□□□□ 0.88
Tpm1-213ENSMUST00000113697 Abcc8B2RUS7 1588 aa20.35■□□□□ 0.85
Tpm1-213ENSMUST00000113697 Ube2uB1AUC4 352 aa20.19■□□□□ 0.82
Tpm1-213ENSMUST00000113697 Senp3Q9EP97 568 aaKnown RBP20.02■□□□□ 0.79
Tpm1-213ENSMUST00000113697 Ppargc1bQ8VHJ7 1014 aa19.48■□□□□ 0.71
Tpm1-213ENSMUST00000113697 ScribQ80U72 1612 aa19.47■□□□□ 0.71
Tpm1-213ENSMUST00000113697 Kdm5dQ62240 1548 aa18.9■□□□□ 0.62
Tpm1-213ENSMUST00000113697 NacadQ5SWP3 1504 aa18.88■□□□□ 0.61
Tpm1-213ENSMUST00000113697 Dcaf1Q80TR8 1506 aa18.87■□□□□ 0.61
Tpm1-213ENSMUST00000113697 Dmrt2Q8BG36 561 aa18.66■□□□□ 0.58
Tpm1-213ENSMUST00000113697 Rhox8Q6VSS7 320 aa18.61■□□□□ 0.57
Tpm1-213ENSMUST00000113697 Sycp2Q9CUU3 1500 aa18.5■□□□□ 0.55
Tpm1-213ENSMUST00000113697 Slc4a1apE9PX68 744 aa18.48■□□□□ 0.55
Tpm1-213ENSMUST00000113697 Rb1cc1Q9ESK9 1588 aa18.46■□□□□ 0.55
Tpm1-213ENSMUST00000113697 Ccdc180J3QNE4 1664 aa18.4■□□□□ 0.54
Tpm1-213ENSMUST00000113697 Ehmt2Q9Z148 1263 aaKnown RBP18.28■□□□□ 0.52
Tpm1-213ENSMUST00000113697 Baz1aO88379 1555 aa18.24■□□□□ 0.51
Tpm1-213ENSMUST00000113697 Fam71e1A1L3C1 212 aa18.23■□□□□ 0.51
Tpm1-213ENSMUST00000113697 BicraF8VPZ9 1578 aa18.21■□□□□ 0.51
Tpm1-213ENSMUST00000113697 Crybg2B7ZCC2 1516 aa18.12■□□□□ 0.49
Tpm1-213ENSMUST00000113697 Zcchc6Q5BLK4 1491 aaKnown RBP17.93■□□□□ 0.46
Tpm1-213ENSMUST00000113697 Rtl1Q7M732 1744 aa17.93■□□□□ 0.46
Tpm1-213ENSMUST00000113697 Smarca2Q6DIC0 1577 aa17.76■□□□□ 0.43
Tpm1-213ENSMUST00000113697 Pds5bQ4VA53 1446 aaKnown RBP17.63■□□□□ 0.41
Tpm1-213ENSMUST00000113697 Trap1aP19473 224 aa17.58■□□□□ 0.41
Tpm1-213ENSMUST00000113697 Cecr2E9Q2Z1 1453 aa17.56■□□□□ 0.4
Tpm1-213ENSMUST00000113697 Atad2bE9Q166 1460 aaKnown RBP17.52■□□□□ 0.4
Tpm1-213ENSMUST00000113697 Smarca4Q3TKT4 1613 aaKnown RBP17.5■□□□□ 0.39
Tpm1-213ENSMUST00000113697 AcrbpQ3V140 540 aa17.43■□□□□ 0.38
Tpm1-213ENSMUST00000113697 Pde4cQ3UEI1 686 aa17.41■□□□□ 0.38
Tpm1-213ENSMUST00000113697 Ccdc136Q3TVA9 1136 aa17.38■□□□□ 0.37
Tpm1-213ENSMUST00000113697 Thoc2B1AZI6 1594 aaKnown RBP17.38■□□□□ 0.37
Tpm1-213ENSMUST00000113697 Iqgap2Q3UQ44 1575 aa17.37■□□□□ 0.37
Tpm1-213ENSMUST00000113697 Dnajc5bQ9CQ94 199 aa17.36■□□□□ 0.37
Tpm1-213ENSMUST00000113697 Nlrp6Q91WS2 869 aa17.33■□□□□ 0.36
Tpm1-213ENSMUST00000113697 Ercc6F8VPZ5 1481 aa17.29■□□□□ 0.36
Tpm1-213ENSMUST00000113697 Atf5O70191 283 aa17.28■□□□□ 0.36
Tpm1-213ENSMUST00000113697 Brd4Q9ESU6 1400 aaKnown RBP17.23■□□□□ 0.35
Tpm1-213ENSMUST00000113697 Cttnbp2B9EJA2 1648 aa17.21■□□□□ 0.35
Tpm1-213ENSMUST00000113697 Synj1Q8CHC4 1574 aa17.2■□□□□ 0.34
Tpm1-213ENSMUST00000113697 Rtn4Q99P72 1162 aaKnown RBP17.19■□□□□ 0.34
Tpm1-213ENSMUST00000113697 CftrP26361 1476 aa17.19■□□□□ 0.34
Tpm1-213ENSMUST00000113697 Wdr62Q3U3T8 1523 aa17.16■□□□□ 0.34
Tpm1-213ENSMUST00000113697 Cc2d2aQ8CFW7 1633 aa17.15■□□□□ 0.34
Tpm1-213ENSMUST00000113697 Frmpd1A2AKB4 1549 aa17.15■□□□□ 0.34
Tpm1-213ENSMUST00000113697 Hoxd11P23813 323 aa17.15■□□□□ 0.34
Tpm1-213ENSMUST00000113697 1700123L14RikQ3V2K7 440 aa17.11■□□□□ 0.33
Tpm1-213ENSMUST00000113697 Prdm10Q3UTQ7 1184 aa17.08■□□□□ 0.32
Tpm1-213ENSMUST00000113697 Trim41Q5NCC3 630 aa17.06■□□□□ 0.32
Tpm1-213ENSMUST00000113697 Fam135aQ6NS59 1506 aa17.04■□□□□ 0.32
Tpm1-213ENSMUST00000113697 Cdca7Q9D0M2 382 aa17.04■□□□□ 0.32
Tpm1-213ENSMUST00000113697 Tshz2Q68FE9 1030 aa17.03■□□□□ 0.32
Tpm1-213ENSMUST00000113697 Phldb1Q6PDH0 1371 aaKnown RBP16.98■□□□□ 0.31
Tpm1-213ENSMUST00000113697 Ppp4r2Q0VGB7 417 aa16.98■□□□□ 0.31
Tpm1-213ENSMUST00000113697 Esf1Q3V1V3 845 aaKnown RBP16.96■□□□□ 0.3
Tpm1-213ENSMUST00000113697 Unc13aQ4KUS2 1712 aa16.95■□□□□ 0.3
Tpm1-213ENSMUST00000113697 Hs6st3Q9QYK4 470 aa16.91■□□□□ 0.3
Tpm1-213ENSMUST00000113697 Ecm2Q5FW85 670 aa16.9■□□□□ 0.3
Tpm1-213ENSMUST00000113697 Ubl4bQ9CQ84 188 aa16.85■□□□□ 0.29
Tpm1-213ENSMUST00000113697 Top2bQ64511 1612 aa16.78■□□□□ 0.28
Tpm1-213ENSMUST00000113697 Golga3P55937 1487 aa16.77■□□□□ 0.28
Tpm1-213ENSMUST00000113697 Baz1bQ9Z277 1479 aa16.77■□□□□ 0.27
Tpm1-213ENSMUST00000113697 Prm3Q62100 101 aa16.76■□□□□ 0.27
Tpm1-213ENSMUST00000113697 Npm2Q80W85 207 aa16.75■□□□□ 0.27
Tpm1-213ENSMUST00000113697 Cngb1E1AZ71 1325 aa16.72■□□□□ 0.27
Tpm1-213ENSMUST00000113697 Rsf1E9PWW9 1441 aaKnown RBP16.69■□□□□ 0.26
Tpm1-213ENSMUST00000113697 Mrc2Q64449 1479 aa16.66■□□□□ 0.26
Tpm1-213ENSMUST00000113697 Kif15Q6P9L6 1387 aa16.65■□□□□ 0.26
Tpm1-213ENSMUST00000113697 Lamc3Q9R0B6 1581 aa16.62■□□□□ 0.25
Tpm1-213ENSMUST00000113697 Prdm16A2A935 1275 aa16.6■□□□□ 0.25
Tpm1-213ENSMUST00000113697 TnnQ80Z71 1560 aa16.58■□□□□ 0.24
Tpm1-213ENSMUST00000113697 Cux2P70298 1426 aa16.57■□□□□ 0.24
Tpm1-213ENSMUST00000113697 Taok2Q6ZQ29 1240 aa16.55■□□□□ 0.24
Tpm1-213ENSMUST00000113697 Arid3aQ62431 601 aa16.53■□□□□ 0.24
Tpm1-213ENSMUST00000113697 Fmn1Q05860 1466 aa16.51■□□□□ 0.23
Tpm1-213ENSMUST00000113697 Chrna2Q91X60 512 aa16.46■□□□□ 0.23
Tpm1-213ENSMUST00000113697 Npm1Q61937 292 aaKnown RBP16.43■□□□□ 0.22
Tpm1-213ENSMUST00000113697 HrcG5E8J6 738 aa16.41■□□□□ 0.22
Tpm1-213ENSMUST00000113697 Ccdc88bQ4QRL3 1481 aa16.41■□□□□ 0.22
Tpm1-213ENSMUST00000113697 Il27Q8K3I6 234 aa16.4■□□□□ 0.22
Tpm1-213ENSMUST00000113697 Kif21aQ9QXL2 1672 aa16.39■□□□□ 0.21
Tpm1-213ENSMUST00000113697 Ccdc18Q640L5 1455 aa16.38■□□□□ 0.21
Tpm1-213ENSMUST00000113697 Cep164Q5DU05 1446 aa16.37■□□□□ 0.21
Tpm1-213ENSMUST00000113697 Camsap1A2AHC3 1581 aa16.36■□□□□ 0.21
Tpm1-213ENSMUST00000113697 Styxl1Q9DAR2 321 aa16.34■□□□□ 0.21
Tpm1-213ENSMUST00000113697 Top2aQ01320 1528 aaKnown RBP16.3■□□□□ 0.2
Tpm1-213ENSMUST00000113697 Lrriq1Q0P5X1 1673 aa16.29■□□□□ 0.2
Tpm1-213ENSMUST00000113697 CatipB9EKE5 520 aa16.28■□□□□ 0.2
Tpm1-213ENSMUST00000113697 LrpprcQ6PB66 1392 aaKnown RBP16.25■□□□□ 0.19
Tpm1-213ENSMUST00000113697 Dhx29Q6PGC1 1365 aaKnown RBP16.24■□□□□ 0.19
Tpm1-213ENSMUST00000113697 Riok3Q9DBU3 519 aaKnown RBP16.24■□□□□ 0.19
Tpm1-213ENSMUST00000113697 MyclP10166 368 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 78.7 ms