RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Fam229bQ8CF36 80 aa7.81□□□□□ -1.16
Usf3-201ENSMUST00000088356 Mt2P02798 61 aa7.78□□□□□ -1.16
Usf3-201ENSMUST00000088356 Krtap8-1O08633 61 aa7.76□□□□□ -1.17
Usf3-201ENSMUST00000088356 Pde6gP09174 87 aa7.76□□□□□ -1.17
Usf3-201ENSMUST00000088356 Xcl1P47993 114 aa7.75□□□□□ -1.17
Usf3-201ENSMUST00000088356 Trav3-1Q5R1I8 114 aa7.75□□□□□ -1.17
Usf3-201ENSMUST00000088356 Lce1a1Q9CQH5 143 aa7.73□□□□□ -1.17
Usf3-201ENSMUST00000088356 9230102O04RikA2ASX7 82 aa7.72□□□□□ -1.17
Usf3-201ENSMUST00000088356 Lce1a2Q9D1K4 149 aa7.67□□□□□ -1.18
Usf3-201ENSMUST00000088356 Lce1hQ9D6R3 140 aa7.67□□□□□ -1.18
Usf3-201ENSMUST00000088356 Krtap20-2E9Q0A8 60 aa7.66□□□□□ -1.18
Usf3-201ENSMUST00000088356 Lce1eQ9D139 143 aa7.65□□□□□ -1.18
Usf3-201ENSMUST00000088356 Eppk1Q8R0W0 6548 aa7.63□□□□□ -1.19
Usf3-201ENSMUST00000088356 Q8BGJ3 129 aa7.62□□□□□ -1.19
Usf3-201ENSMUST00000088356 Krtap3-1A2A591 98 aa7.59□□□□□ -1.19
Usf3-201ENSMUST00000088356 Sprr2gO70558 76 aa7.57□□□□□ -1.2
Usf3-201ENSMUST00000088356 Ormdl1Q921I0 153 aa7.57□□□□□ -1.2
Usf3-201ENSMUST00000088356 Gm10999F6Q4M4 69 aa7.55□□□□□ -1.2
Usf3-201ENSMUST00000088356 MplkipQ9D011 178 aa7.54□□□□□ -1.2
Usf3-201ENSMUST00000088356 Ubl5Q9EPV8 73 aa7.5□□□□□ -1.21
Usf3-201ENSMUST00000088356 Atp5eP56382 52 aa7.48□□□□□ -1.21
Usf3-201ENSMUST00000088356 Samd13D3YUG0 102 aa7.47□□□□□ -1.21
Usf3-201ENSMUST00000088356 Tmem254aP0DN89 123 aa7.47□□□□□ -1.21
Usf3-201ENSMUST00000088356 Tmem254bP0DN90 123 aa7.47□□□□□ -1.21
Usf3-201ENSMUST00000088356 Tmem254cP0DN91 123 aa7.47□□□□□ -1.21
Usf3-201ENSMUST00000088356 CriptO70333 101 aa7.43□□□□□ -1.22
Usf3-201ENSMUST00000088356 Anapc13Q8R034 74 aa7.43□□□□□ -1.22
Usf3-201ENSMUST00000088356 2310046K23RikA0A0A6YVW6 87 aa7.4□□□□□ -1.22
Usf3-201ENSMUST00000088356 Krtap22-2J3QNX6 67 aa7.4□□□□□ -1.22
Usf3-201ENSMUST00000088356 Spink7Q6IE32 76 aa7.4□□□□□ -1.22
Usf3-201ENSMUST00000088356 Prr15lQ8JZM2 100 aa7.39□□□□□ -1.23
Usf3-201ENSMUST00000088356 Limd2Q8BGB5 128 aa7.38□□□□□ -1.23
Usf3-201ENSMUST00000088356 A0A286YE49 62 aa7.36□□□□□ -1.23
Usf3-201ENSMUST00000088356 Hist1h4aP62806 103 aaKnown RBP7.34□□□□□ -1.23
Usf3-201ENSMUST00000088356 Spint4Q9D263 159 aa7.32□□□□□ -1.24
Usf3-201ENSMUST00000088356 BC029722A0A0N4SW31 51 aa7.31□□□□□ -1.24
Usf3-201ENSMUST00000088356 Defb1P56386 69 aa7.31□□□□□ -1.24
Usf3-201ENSMUST00000088356 1700074P13RikQ9D9G7 251 aa7.3□□□□□ -1.24
Usf3-201ENSMUST00000088356 4930507D05RikQ8C9C9 103 aa7.29□□□□□ -1.24
Usf3-201ENSMUST00000088356 Ndufc1Q9CQY9 76 aa7.29□□□□□ -1.24
Usf3-201ENSMUST00000088356 Gm10643Q3URG9 111 aa7.25□□□□□ -1.25
Usf3-201ENSMUST00000088356 Gm11639A0A1D5RLM8 5808 aa7.23□□□□□ -1.25
Usf3-201ENSMUST00000088356 Gm20537G3UYK7 97 aa7.2□□□□□ -1.26
Usf3-201ENSMUST00000088356 Serp2Q6TAW2 65 aa7.18□□□□□ -1.26
Usf3-201ENSMUST00000088356 Spink8Q09TK9 105 aa7.17□□□□□ -1.26
Usf3-201ENSMUST00000088356 4930518I15RikQ3V2W7 57 aa7.14□□□□□ -1.27
Usf3-201ENSMUST00000088356 Gm17606F6ZL36 78 aa7.11□□□□□ -1.27
Usf3-201ENSMUST00000088356 A0A1Y7VJH8 109 aa7.1□□□□□ -1.27
Usf3-201ENSMUST00000088356 Gm21798J3QNU5 87 aa7.06□□□□□ -1.28
Usf3-201ENSMUST00000088356 Prr13Q9CQJ5 137 aa7.04□□□□□ -1.28
Usf3-201ENSMUST00000088356 Gm10382Q3V0T5 144 aa7.02□□□□□ -1.29
Usf3-201ENSMUST00000088356 B230307C23RikQ8BLB2 64 aa7.02□□□□□ -1.29
Usf3-201ENSMUST00000088356 Macf1Q9QXZ0 7354 aaKnown RBP7.02□□□□□ -1.29
Usf3-201ENSMUST00000088356 Cox6b2Q80ZN9 88 aa7□□□□□ -1.29
Usf3-201ENSMUST00000088356 Gm19668J3QMD1 248 aa6.99□□□□□ -1.29
Usf3-201ENSMUST00000088356 Gpr98Q8VHN7 6298 aaKnown RBP6.98□□□□□ -1.29
Usf3-201ENSMUST00000088356 A030005L19RikA0A1Y7VIU2 113 aa6.97□□□□□ -1.29
Usf3-201ENSMUST00000088356 Lce1dQ9D731 133 aa6.97□□□□□ -1.29
Usf3-201ENSMUST00000088356 Gm11559Q9D3H7 191 aa6.96□□□□□ -1.3
Usf3-201ENSMUST00000088356 Smlr1J3QMJ4 66 aa6.95□□□□□ -1.3
Usf3-201ENSMUST00000088356 Gm11554B1AQB2 190 aa6.93□□□□□ -1.3
Usf3-201ENSMUST00000088356 Atox1O08997 68 aaKnown RBP6.93□□□□□ -1.3
Usf3-201ENSMUST00000088356 Tmem258P61166 79 aa6.91□□□□□ -1.3
Usf3-201ENSMUST00000088356 Coa6Q8BGD8 79 aa6.9□□□□□ -1.3
Usf3-201ENSMUST00000088356 Gm19935A0A1B0GSF9 52 aa6.89□□□□□ -1.31
Usf3-201ENSMUST00000088356 Krtap5-2Q9D5Z7 189 aa6.89□□□□□ -1.31
Usf3-201ENSMUST00000088356 Kmt2dQ6PDK2 5588 aa6.87□□□□□ -1.31
Usf3-201ENSMUST00000088356 Pcp4P63054 62 aa6.84□□□□□ -1.31
Usf3-201ENSMUST00000088356 SmcpP15265 143 aa6.83□□□□□ -1.32
Usf3-201ENSMUST00000088356 Pet100P0DJE0 76 aa6.81□□□□□ -1.32
Usf3-201ENSMUST00000088356 Rps28P62858 69 aaKnown RBP6.78□□□□□ -1.32
Usf3-201ENSMUST00000088356 Smim20D3Z7Q2 69 aa6.77□□□□□ -1.33
Usf3-201ENSMUST00000088356 Gm10160F6Y577 67 aa6.74□□□□□ -1.33
Usf3-201ENSMUST00000088356 Lce1kJ3QP15 125 aa6.72□□□□□ -1.33
Usf3-201ENSMUST00000088356 Coa5Q99M07 74 aa6.72□□□□□ -1.33
Usf3-201ENSMUST00000088356 SnurfQ9WU12 71 aa6.71□□□□□ -1.34
Usf3-201ENSMUST00000088356 Serp1Q9Z1W5 66 aa6.71□□□□□ -1.34
Usf3-201ENSMUST00000088356 Muc19Q6PZE0 7524 aa6.71□□□□□ -1.34
Usf3-201ENSMUST00000088356 Sprr2iO70560 76 aa6.7□□□□□ -1.34
Usf3-201ENSMUST00000088356 Sprr2a3Q4KL71 83 aa6.69□□□□□ -1.34
Usf3-201ENSMUST00000088356 Sprr2a1Q9CQK8 83 aa6.69□□□□□ -1.34
Usf3-201ENSMUST00000088356 Gm4553A0A1B0GSA9 284 aa6.66□□□□□ -1.34
Usf3-201ENSMUST00000088356 Cdc42se1Q8BHL7 80 aa6.65□□□□□ -1.34
Usf3-201ENSMUST00000088356 Brk1Q91VR8 75 aa6.63□□□□□ -1.35
Usf3-201ENSMUST00000088356 Gm10197F6QEY5 67 aa6.55□□□□□ -1.36
Usf3-201ENSMUST00000088356 Gm11568A2A4M2 211 aa6.54□□□□□ -1.36
Usf3-201ENSMUST00000088356 Krtap9-1Q64526 186 aa6.54□□□□□ -1.36
Usf3-201ENSMUST00000088356 Gm2431E9Q8S1 172 aa6.51□□□□□ -1.37
Usf3-201ENSMUST00000088356 SptssbQ925E8 76 aa6.51□□□□□ -1.37
Usf3-201ENSMUST00000088356 Phxr4P15974 95 aa6.47□□□□□ -1.37
Usf3-201ENSMUST00000088356 H2al1aQ5M8Q2 105 aa6.46□□□□□ -1.38
Usf3-201ENSMUST00000088356 Gm21887J3QQ04 176 aa6.45□□□□□ -1.38
Usf3-201ENSMUST00000088356 Krtap19-9bQ99NG9 58 aa6.45□□□□□ -1.38
Usf3-201ENSMUST00000088356 Gm20661K7N787 53 aa6.44□□□□□ -1.38
Usf3-201ENSMUST00000088356 Syne1Q6ZWR6 8799 aa6.44□□□□□ -1.38
Usf3-201ENSMUST00000088356 H2al1eQ810S6 105 aa6.43□□□□□ -1.38
Usf3-201ENSMUST00000088356 Ndufb1P0DN34 57 aa6.35□□□□□ -1.39
Usf3-201ENSMUST00000088356 H2al1bA0A087WP11 105 aa6.34□□□□□ -1.39
Usf3-201ENSMUST00000088356 Uqcr11Q9CPX8 56 aa6.34□□□□□ -1.39
Usf3-201ENSMUST00000088356 Sox16Q62247 57 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms