RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Gm35339A0A140LHH9 1649 aa41.97■■■■■ 4.31
Usf3-201ENSMUST00000088356 NischQ80TM9 1593 aa40.99■■■■■ 4.15
Usf3-201ENSMUST00000088356 Abcc9P70170 1546 aa40.11■■■■■ 4.01
Usf3-201ENSMUST00000088356 Abcc8B2RUS7 1588 aa39.9■■■■□ 3.98
Usf3-201ENSMUST00000088356 ScribQ80U72 1612 aa39.15■■■■□ 3.86
Usf3-201ENSMUST00000088356 NacadQ5SWP3 1504 aa37.62■■■■□ 3.61
Usf3-201ENSMUST00000088356 Kdm5dQ62240 1548 aa37.57■■■■□ 3.61
Usf3-201ENSMUST00000088356 Dnajc5bQ9CQ94 199 aa37.1■■■■□ 3.53
Usf3-201ENSMUST00000088356 Sycp2Q9CUU3 1500 aa36.97■■■■□ 3.51
Usf3-201ENSMUST00000088356 BicraF8VPZ9 1578 aa36.7■■■■□ 3.47
Usf3-201ENSMUST00000088356 Dcaf1Q80TR8 1506 aa36.5■■■■□ 3.43
Usf3-201ENSMUST00000088356 Thoc2B1AZI6 1594 aaKnown RBP35.9■■■■□ 3.34
Usf3-201ENSMUST00000088356 Pds5bQ4VA53 1446 aaKnown RBP35.7■■■■□ 3.31
Usf3-201ENSMUST00000088356 Rb1cc1Q9ESK9 1588 aa35.69■■■■□ 3.3
Usf3-201ENSMUST00000088356 Cc2d2aQ8CFW7 1633 aa35.28■■■■□ 3.24
Usf3-201ENSMUST00000088356 Atad2bE9Q166 1460 aaKnown RBP35.21■■■■□ 3.23
Usf3-201ENSMUST00000088356 Baz1aO88379 1555 aa35.06■■■■□ 3.2
Usf3-201ENSMUST00000088356 Ercc6F8VPZ5 1481 aa34.98■■■■□ 3.19
Usf3-201ENSMUST00000088356 Crybg2B7ZCC2 1516 aa34.91■■■■□ 3.18
Usf3-201ENSMUST00000088356 Fam135aQ6NS59 1506 aa34.86■■■■□ 3.17
Usf3-201ENSMUST00000088356 Ccdc180J3QNE4 1664 aa34.84■■■■□ 3.17
Usf3-201ENSMUST00000088356 Smarca2Q6DIC0 1577 aa34.75■■■■□ 3.15
Usf3-201ENSMUST00000088356 Zcchc6Q5BLK4 1491 aaKnown RBP34.75■■■■□ 3.15
Usf3-201ENSMUST00000088356 Smarca4Q3TKT4 1613 aaKnown RBP34.61■■■■□ 3.13
Usf3-201ENSMUST00000088356 Iqgap2Q3UQ44 1575 aa34.58■■■■□ 3.13
Usf3-201ENSMUST00000088356 Rhox8Q6VSS7 320 aa34.47■■■■□ 3.11
Usf3-201ENSMUST00000088356 Wdr62Q3U3T8 1523 aa34.42■■■■□ 3.1
Usf3-201ENSMUST00000088356 Frmpd1A2AKB4 1549 aa34.37■■■■□ 3.09
Usf3-201ENSMUST00000088356 Dnajc5P60904 198 aa34.36■■■■□ 3.09
Usf3-201ENSMUST00000088356 Phldb1Q6PDH0 1371 aaKnown RBP34.3■■■■□ 3.08
Usf3-201ENSMUST00000088356 Cecr2E9Q2Z1 1453 aa34.29■■■■□ 3.08
Usf3-201ENSMUST00000088356 Baz1bQ9Z277 1479 aa34.22■■■■□ 3.07
Usf3-201ENSMUST00000088356 Ubl4bQ9CQ84 188 aa34.03■■■■□ 3.04
Usf3-201ENSMUST00000088356 Mrc2Q64449 1479 aa34.01■■■■□ 3.04
Usf3-201ENSMUST00000088356 Trim41Q5NCC3 630 aa34.01■■■■□ 3.03
Usf3-201ENSMUST00000088356 Unc13aQ4KUS2 1712 aa33.99■■■■□ 3.03
Usf3-201ENSMUST00000088356 Lrriq1Q0P5X1 1673 aa33.43■■■□□ 2.94
Usf3-201ENSMUST00000088356 Cttnbp2B9EJA2 1648 aa33.28■■■□□ 2.92
Usf3-201ENSMUST00000088356 CftrP26361 1476 aa33.27■■■□□ 2.92
Usf3-201ENSMUST00000088356 Synj1Q8CHC4 1574 aa33.18■■■□□ 2.9
Usf3-201ENSMUST00000088356 Rsf1E9PWW9 1441 aaKnown RBP33.18■■■□□ 2.9
Usf3-201ENSMUST00000088356 Kif21aQ9QXL2 1672 aa33.07■■■□□ 2.88
Usf3-201ENSMUST00000088356 Cux2P70298 1426 aa33.01■■■□□ 2.87
Usf3-201ENSMUST00000088356 Shroom2A2ALU4 1481 aa32.97■■■□□ 2.87
Usf3-201ENSMUST00000088356 Eif4g3Q80XI3 1579 aaKnown RBP32.91■■■□□ 2.86
Usf3-201ENSMUST00000088356 Brd4Q9ESU6 1400 aaKnown RBP32.84■■■□□ 2.85
Usf3-201ENSMUST00000088356 Kif15Q6P9L6 1387 aa32.81■■■□□ 2.84
Usf3-201ENSMUST00000088356 Col17a1Q07563 1470 aa32.74■■■□□ 2.83
Usf3-201ENSMUST00000088356 Rtl1Q7M732 1744 aa32.63■■■□□ 2.81
Usf3-201ENSMUST00000088356 Esf1Q3V1V3 845 aaKnown RBP32.54■■■□□ 2.8
Usf3-201ENSMUST00000088356 Lamc3Q9R0B6 1581 aa32.52■■■□□ 2.8
Usf3-201ENSMUST00000088356 Npm1Q61937 292 aaKnown RBP32.49■■■□□ 2.79
Usf3-201ENSMUST00000088356 Urb2E9Q7L1 1524 aaKnown RBP32.46■■■□□ 2.79
Usf3-201ENSMUST00000088356 Top2bQ64511 1612 aa32.44■■■□□ 2.78
Usf3-201ENSMUST00000088356 Ccdc136Q3TVA9 1136 aa32.44■■■□□ 2.78
Usf3-201ENSMUST00000088356 Pabpn1Q8CCS6 302 aaKnown RBP32.4■■■□□ 2.78
Usf3-201ENSMUST00000088356 Cep164Q5DU05 1446 aa32.35■■■□□ 2.77
Usf3-201ENSMUST00000088356 Plb1Q3TTY0 1478 aa32.34■■■□□ 2.77
Usf3-201ENSMUST00000088356 Dhx29Q6PGC1 1365 aaKnown RBP32.24■■■□□ 2.75
Usf3-201ENSMUST00000088356 Pelp1Q9DBD5 1123 aaKnown RBP32.19■■■□□ 2.74
Usf3-201ENSMUST00000088356 Zcchc11B2RX14 1644 aaKnown RBP32.11■■■□□ 2.73
Usf3-201ENSMUST00000088356 Crocc2F6XLV1 1638 aa32.11■■■□□ 2.73
Usf3-201ENSMUST00000088356 Rusc2Q80U22 1514 aa32.1■■■□□ 2.73
Usf3-201ENSMUST00000088356 Il27Q8K3I6 234 aa32.04■■■□□ 2.72
Usf3-201ENSMUST00000088356 LrpprcQ6PB66 1392 aaKnown RBP31.98■■■□□ 2.71
Usf3-201ENSMUST00000088356 Ccdc18Q640L5 1455 aa31.97■■■□□ 2.71
Usf3-201ENSMUST00000088356 Ift140E9PY46 1464 aa31.93■■■□□ 2.7
Usf3-201ENSMUST00000088356 TnnQ80Z71 1560 aa31.9■■■□□ 2.7
Usf3-201ENSMUST00000088356 Pcdh10E9PXQ7 1057 aa31.9■■■□□ 2.7
Usf3-201ENSMUST00000088356 Camsap1A2AHC3 1581 aa31.87■■■□□ 2.69
Usf3-201ENSMUST00000088356 Arhgef5E9Q7D5 1581 aa31.77■■■□□ 2.68
Usf3-201ENSMUST00000088356 PogzQ8BZH4 1409 aaKnown RBP31.75■■■□□ 2.67
Usf3-201ENSMUST00000088356 Adgrl3Q80TS3 1537 aa31.68■■■□□ 2.66
Usf3-201ENSMUST00000088356 Setd1bQ8CFT2 1985 aa31.61■■■□□ 2.65
Usf3-201ENSMUST00000088356 Disp1Q3TDN0 1521 aa31.61■■■□□ 2.65
Usf3-201ENSMUST00000088356 Duox2A2AQ99 1517 aa31.58■■■□□ 2.65
Usf3-201ENSMUST00000088356 Ttbk1Q6PCN3 1308 aa31.56■■■□□ 2.64
Usf3-201ENSMUST00000088356 Cep170Q6A065 1588 aa31.51■■■□□ 2.64
Usf3-201ENSMUST00000088356 PtprkP35822 1457 aa31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Golga3P55937 1487 aa31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Nup160Q9Z0W3 1402 aaKnown RBP31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Pbrm1Q8BSQ9 1634 aaKnown RBP31.44■■■□□ 2.62
Usf3-201ENSMUST00000088356 Samd9lQ69Z37 1561 aa31.43■■■□□ 2.62
Usf3-201ENSMUST00000088356 Cc2d2bA0A286YDU8 1405 aa31.43■■■□□ 2.62
Usf3-201ENSMUST00000088356 PtprtQ99M80 1454 aa31.41■■■□□ 2.62
Usf3-201ENSMUST00000088356 Gapvd1Q6PAR5 1458 aa31.4■■■□□ 2.62
Usf3-201ENSMUST00000088356 Gm156Q58A37 223 aa31.38■■■□□ 2.61
Usf3-201ENSMUST00000088356 Cngb1E1AZ71 1325 aa31.31■■■□□ 2.6
Usf3-201ENSMUST00000088356 Grin2bQ01097 1482 aa31.31■■■□□ 2.6
Usf3-201ENSMUST00000088356 Fgd6Q69ZL1 1399 aa31.27■■■□□ 2.6
Usf3-201ENSMUST00000088356 Fmn1Q05860 1466 aa31.22■■■□□ 2.59
Usf3-201ENSMUST00000088356 AqrQ8CFQ3 1481 aaKnown RBP31.22■■■□□ 2.59
Usf3-201ENSMUST00000088356 Pprc1Q6NZN1 1644 aa31.2■■■□□ 2.59
Usf3-201ENSMUST00000088356 Rad54l2Q99NG0 1466 aa31.2■■■□□ 2.58
Usf3-201ENSMUST00000088356 Grin2aP35436 1464 aa31.14■■■□□ 2.58
Usf3-201ENSMUST00000088356 Magi3Q9EQJ9 1476 aa31.14■■■□□ 2.57
Usf3-201ENSMUST00000088356 Abcc1O35379 1528 aa31.1■■■□□ 2.57
Usf3-201ENSMUST00000088356 AknaQ80VW7 1404 aa31.09■■■□□ 2.57
Usf3-201ENSMUST00000088356 Efcab5A0JP43 1406 aa31.06■■■□□ 2.56
Usf3-201ENSMUST00000088356 Rapgef2Q8CHG7 1496 aa31.04■■■□□ 2.56
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms