Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm25239-201ENSMUST00000174915 86 ntBASIC13.4□□□□□ -0.26
Syne1Q6ZWR6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne1Q6ZWR6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne1Q6ZWR6 Gm24109-201ENSMUST00000175489 103 ntBASIC11.72□□□□□ -0.53
Syne1Q6ZWR6 Gm15042-201ENSMUST00000120212 883 ntBASIC11.51□□□□□ -0.57
Syne1Q6ZWR6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Syne1Q6ZWR6 Gm15045-201ENSMUST00000117359 883 ntBASIC11.27□□□□□ -0.6
Syne1Q6ZWR6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne1Q6ZWR6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Syne1Q6ZWR6 Gm23366-201ENSMUST00000175022 89 ntBASIC11.15□□□□□ -0.62
Syne1Q6ZWR6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Syne1Q6ZWR6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Syne1Q6ZWR6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC10.96□□□□□ -0.65
Syne1Q6ZWR6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC10.95□□□□□ -0.66
Syne1Q6ZWR6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Syne1Q6ZWR6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Syne1Q6ZWR6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Syne1Q6ZWR6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Syne1Q6ZWR6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Syne1Q6ZWR6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Syne1Q6ZWR6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Syne1Q6ZWR6 Gm25238-201ENSMUST00000174914 89 ntBASIC10.68□□□□□ -0.7
Syne1Q6ZWR6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Syne1Q6ZWR6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Syne1Q6ZWR6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC10.55□□□□□ -0.72
Syne1Q6ZWR6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Syne1Q6ZWR6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC10.48□□□□□ -0.73
Syne1Q6ZWR6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Syne1Q6ZWR6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Syne1Q6ZWR6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Syne1Q6ZWR6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Syne1Q6ZWR6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Syne1Q6ZWR6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Syne1Q6ZWR6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Syne1Q6ZWR6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC10.29□□□□□ -0.76
Syne1Q6ZWR6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Syne1Q6ZWR6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Syne1Q6ZWR6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC10.27□□□□□ -0.77
Syne1Q6ZWR6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Syne1Q6ZWR6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Syne1Q6ZWR6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC10.19□□□□□ -0.78
Syne1Q6ZWR6 Gm25262-201ENSMUST00000174934 133 ntBASIC10.17□□□□□ -0.78
Syne1Q6ZWR6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Syne1Q6ZWR6 Psd-208ENSMUST00000224556 2034 ntBASIC10.15□□□□□ -0.79
Syne1Q6ZWR6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Syne1Q6ZWR6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC10.13□□□□□ -0.79
Syne1Q6ZWR6 Gm27325-201ENSMUST00000175467 74 ntBASIC10.12□□□□□ -0.79
Syne1Q6ZWR6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Syne1Q6ZWR6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Syne1Q6ZWR6 Rab21-202ENSMUST00000218831 843 ntBASIC10.04□□□□□ -0.8
Syne1Q6ZWR6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC10.03□□□□□ -0.8
Syne1Q6ZWR6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Syne1Q6ZWR6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Syne1Q6ZWR6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC10.01□□□□□ -0.81
Syne1Q6ZWR6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC10□□□□□ -0.81
Syne1Q6ZWR6 Gm26115-201ENSMUST00000175605 87 ntBASIC10□□□□□ -0.81
Syne1Q6ZWR6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
Syne1Q6ZWR6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC9.97□□□□□ -0.81
Syne1Q6ZWR6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC9.97□□□□□ -0.81
Syne1Q6ZWR6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Syne1Q6ZWR6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Syne1Q6ZWR6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC9.91□□□□□ -0.82
Syne1Q6ZWR6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Syne1Q6ZWR6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC9.87□□□□□ -0.83
Syne1Q6ZWR6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC9.86□□□□□ -0.83
Syne1Q6ZWR6 Gm8109-201ENSMUST00000194076 746 ntBASIC9.85□□□□□ -0.83
Syne1Q6ZWR6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC9.85□□□□□ -0.83
Syne1Q6ZWR6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC9.85□□□□□ -0.83
Syne1Q6ZWR6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Syne1Q6ZWR6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Syne1Q6ZWR6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Syne1Q6ZWR6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Syne1Q6ZWR6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Syne1Q6ZWR6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Syne1Q6ZWR6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Syne1Q6ZWR6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Syne1Q6ZWR6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Syne1Q6ZWR6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC9.77□□□□□ -0.85
Syne1Q6ZWR6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC9.77□□□□□ -0.85
Syne1Q6ZWR6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Syne1Q6ZWR6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Syne1Q6ZWR6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Syne1Q6ZWR6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Syne1Q6ZWR6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Syne1Q6ZWR6 Gm24804-201ENSMUST00000174982 85 ntBASIC9.7□□□□□ -0.86
Syne1Q6ZWR6 Gm17082-201ENSMUST00000166043 1091 ntBASIC9.68□□□□□ -0.86
Syne1Q6ZWR6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Syne1Q6ZWR6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC9.68□□□□□ -0.86
Syne1Q6ZWR6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Syne1Q6ZWR6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC9.66□□□□□ -0.86
Syne1Q6ZWR6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Syne1Q6ZWR6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC9.63□□□□□ -0.87
Syne1Q6ZWR6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC9.63□□□□□ -0.87
Syne1Q6ZWR6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Syne1Q6ZWR6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Syne1Q6ZWR6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Syne1Q6ZWR6 Gm27322-201ENSMUST00000184007 104 ntBASIC9.6□□□□□ -0.87
Syne1Q6ZWR6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Syne1Q6ZWR6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Syne1Q6ZWR6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms