RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Dnah2P0C6F1 4456 aa8.21□□□□□ -1.1
Upf1-201ENSMUST00000075666 Dync2h1Q45VK7 4306 aa8.18□□□□□ -1.1
Upf1-201ENSMUST00000075666 Kmt2aP55200 3966 aa8.1□□□□□ -1.11
Upf1-201ENSMUST00000075666 TnxbO35452 4006 aa8.08□□□□□ -1.12
Upf1-201ENSMUST00000075666 4933428G20RikQ9D3X4 101 aa8.07□□□□□ -1.12
Upf1-201ENSMUST00000075666 SacsQ9JLC8 4582 aa8.04□□□□□ -1.12
Upf1-201ENSMUST00000075666 Hectd4E9Q2E4 4418 aa8.04□□□□□ -1.12
Upf1-201ENSMUST00000075666 Dnah1E9Q8T7 4250 aa8.02□□□□□ -1.13
Upf1-201ENSMUST00000075666 PrkdcP97313 4128 aa7.99□□□□□ -1.13
Upf1-201ENSMUST00000075666 Krtap1-4Q3V2D6 188 aa7.95□□□□□ -1.14
Upf1-201ENSMUST00000075666 Dync1h1Q9JHU4 4644 aaKnown RBP7.93□□□□□ -1.14
Upf1-201ENSMUST00000075666 Dnah6E9Q0B6 4144 aa7.91□□□□□ -1.14
Upf1-201ENSMUST00000075666 Lrp1Q91ZX7 4545 aaKnown RBP7.87□□□□□ -1.15
Upf1-201ENSMUST00000075666 Krtap19-9aF8WH65 55 aa7.81□□□□□ -1.16
Upf1-201ENSMUST00000075666 Mycbp2Q7TPH6 4711 aa7.79□□□□□ -1.16
Upf1-201ENSMUST00000075666 Vps13bQ80TY5 3993 aa7.75□□□□□ -1.17
Upf1-201ENSMUST00000075666 Dnah7cA0A087WR13 4024 aa7.72□□□□□ -1.17
Upf1-201ENSMUST00000075666 Fat3Q8BNA6 4555 aa7.71□□□□□ -1.18
Upf1-201ENSMUST00000075666 Ryr1E9PZQ0 5035 aa7.71□□□□□ -1.18
Upf1-201ENSMUST00000075666 Krtap19-9bQ99NG9 58 aa7.64□□□□□ -1.19
Upf1-201ENSMUST00000075666 Krtap12-1Q9Z287 130 aa7.61□□□□□ -1.19
Upf1-201ENSMUST00000075666 Fat1A0A1L1SQU7 4645 aa7.6□□□□□ -1.19
Upf1-201ENSMUST00000075666 Dnah8Q91XQ0 4731 aa7.55□□□□□ -1.2
Upf1-201ENSMUST00000075666 Pkd1O08852 4293 aa7.55□□□□□ -1.2
Upf1-201ENSMUST00000075666 Ryr3A2AGL3 4863 aa7.54□□□□□ -1.2
Upf1-201ENSMUST00000075666 Dnah7aE9Q0T8 4024 aa7.54□□□□□ -1.2
Upf1-201ENSMUST00000075666 Krtap16-3Q8C1I6 86 aa7.51□□□□□ -1.21
Upf1-201ENSMUST00000075666 LorP18165 486 aa7.49□□□□□ -1.21
Upf1-201ENSMUST00000075666 Fat2Q5F226 4351 aa7.48□□□□□ -1.21
Upf1-201ENSMUST00000075666 Krtap19-3Q925H6 87 aa7.39□□□□□ -1.23
Upf1-201ENSMUST00000075666 HydinQ80W93 5154 aa7.36□□□□□ -1.23
Upf1-201ENSMUST00000075666 Fras1Q80T14 4010 aa7.34□□□□□ -1.23
Upf1-201ENSMUST00000075666 Krtap19-1Q925H2 87 aa7.34□□□□□ -1.23
Upf1-201ENSMUST00000075666 Gm18596A0A1W2P860 280 aa7.32□□□□□ -1.24
Upf1-201ENSMUST00000075666 Krtap8-1O08633 61 aa7.29□□□□□ -1.24
Upf1-201ENSMUST00000075666 Gm6358A0A087WPH4 74 aa7.29□□□□□ -1.24
Upf1-201ENSMUST00000075666 Kiaa1109A2AAE1 5005 aa7.29□□□□□ -1.24
Upf1-201ENSMUST00000075666 2310046K23RikA0A0A6YVW6 87 aa7.27□□□□□ -1.25
Upf1-201ENSMUST00000075666 Lrp2A2ARV4 4660 aa7.23□□□□□ -1.25
Upf1-201ENSMUST00000075666 Ryr2E9Q401 4966 aaKnown RBP7.22□□□□□ -1.25
Upf1-201ENSMUST00000075666 Herc2Q4U2R1 4836 aa7.14□□□□□ -1.27
Upf1-201ENSMUST00000075666 Kmt2cQ8BRH4 4903 aa7.04□□□□□ -1.28
Upf1-201ENSMUST00000075666 Krtap9-5A2A5X3 358 aa6.98□□□□□ -1.29
Upf1-201ENSMUST00000075666 Lce1jD3YUU5 139 aa6.97□□□□□ -1.29
Upf1-201ENSMUST00000075666 Lce1mQ9CR91 182 aa6.93□□□□□ -1.3
Upf1-201ENSMUST00000075666 Pkhd1l1Q80ZA4 4249 aa6.9□□□□□ -1.31
Upf1-201ENSMUST00000075666 Abca13Q5SSE9 5034 aa6.82□□□□□ -1.32
Upf1-201ENSMUST00000075666 Gm10100J3QK64 120 aa6.77□□□□□ -1.33
Upf1-201ENSMUST00000075666 Gm10272F7CZ33 110 aa6.73□□□□□ -1.33
Upf1-201ENSMUST00000075666 Dnhd1D3Z2X2 4750 aa6.72□□□□□ -1.33
Upf1-201ENSMUST00000075666 Krtap19-2Q925I0 141 aa6.72□□□□□ -1.33
Upf1-201ENSMUST00000075666 Pkhd1E9PZ36 4059 aa6.71□□□□□ -1.34
Upf1-201ENSMUST00000075666 Krtap1-3A2A588 173 aa6.7□□□□□ -1.34
Upf1-201ENSMUST00000075666 Mt2P02798 61 aa6.69□□□□□ -1.34
Upf1-201ENSMUST00000075666 Birc6O88738 4882 aa6.67□□□□□ -1.34
Upf1-201ENSMUST00000075666 PcloQ9QYX7 5068 aa6.64□□□□□ -1.35
Upf1-201ENSMUST00000075666 Lce3bQ9CQM7 98 aa6.59□□□□□ -1.35
Upf1-201ENSMUST00000075666 Prm1P02319 51 aa6.59□□□□□ -1.36
Upf1-201ENSMUST00000075666 Gm10142J3KMP7 120 aa6.58□□□□□ -1.36
Upf1-201ENSMUST00000075666 Sprr2kO70562 68 aa6.56□□□□□ -1.36
Upf1-201ENSMUST00000075666 Krtap22-2J3QNX6 67 aa6.51□□□□□ -1.37
Upf1-201ENSMUST00000075666 Sprr2gO70558 76 aa6.49□□□□□ -1.37
Upf1-201ENSMUST00000075666 Krtap9-3Q3V2C1 136 aa6.44□□□□□ -1.38
Upf1-201ENSMUST00000075666 Lce1iQ9D6P5 149 aa6.44□□□□□ -1.38
Upf1-201ENSMUST00000075666 Herc1E9PZP8 4859 aa6.4□□□□□ -1.38
Upf1-201ENSMUST00000075666 Lce3cQ91V05 98 aa6.4□□□□□ -1.38
Upf1-201ENSMUST00000075666 Gm7735D3YX18 52 aa6.4□□□□□ -1.39
Upf1-201ENSMUST00000075666 Lce1a2Q9D1K4 149 aa6.37□□□□□ -1.39
Upf1-201ENSMUST00000075666 Syne1Q6ZWR6 8799 aa6.32□□□□□ -1.4
Upf1-201ENSMUST00000075666 Lce1hQ9D6R3 140 aa6.3□□□□□ -1.4
Upf1-201ENSMUST00000075666 Lce3eF8VQJ0 98 aa6.3□□□□□ -1.4
Upf1-201ENSMUST00000075666 Lce3fQ6PAI4 98 aa6.3□□□□□ -1.4
Upf1-201ENSMUST00000075666 Gm9789Q8BIG3 52 aa6.29□□□□□ -1.4
Upf1-201ENSMUST00000075666 Lce3dE9Q8V1 98 aa6.29□□□□□ -1.4
Upf1-201ENSMUST00000075666 Ubr4A2AN08 5180 aa6.28□□□□□ -1.4
Upf1-201ENSMUST00000075666 Hmcn2A2AJ76 5100 aa6.22□□□□□ -1.41
Upf1-201ENSMUST00000075666 Krtap17-1A2A5X6 109 aa6.16□□□□□ -1.42
Upf1-201ENSMUST00000075666 Mdn1A2ANY6 5589 aaKnown RBP6.14□□□□□ -1.43
Upf1-201ENSMUST00000075666 Krtap19-4Q925H7 84 aa6.14□□□□□ -1.43
Upf1-201ENSMUST00000075666 Lce3aQ497I5 98 aa6.12□□□□□ -1.43
Upf1-201ENSMUST00000075666 4932415D10RikA0A1W2P6U8 4986 aa6.11□□□□□ -1.43
Upf1-201ENSMUST00000075666 ZanO88799 5376 aa6.09□□□□□ -1.43
Upf1-201ENSMUST00000075666 Gm11938Q9D3H4 131 aa6.07□□□□□ -1.44
Upf1-201ENSMUST00000075666 Sprr2dO70555 85 aa6.05□□□□□ -1.44
Upf1-201ENSMUST00000075666 Gm10061D3Z714 54 aa6.05□□□□□ -1.44
Upf1-201ENSMUST00000075666 Fat4Q2PZL6 4981 aa6.03□□□□□ -1.44
Upf1-201ENSMUST00000075666 Ush2AQ2QI47 5193 aa6.02□□□□□ -1.45
Upf1-201ENSMUST00000075666 Lce1dQ9D731 133 aa5.98□□□□□ -1.45
Upf1-201ENSMUST00000075666 Gm38119A0A0A6YX29 146 aa5.84□□□□□ -1.47
Upf1-201ENSMUST00000075666 Gm11569B1AQB1 180 aa5.83□□□□□ -1.48
Upf1-201ENSMUST00000075666 Lce1gQ9D195 139 aa5.79□□□□□ -1.48
Upf1-201ENSMUST00000075666 Rnf213E9Q555 5152 aaKnown RBP5.76□□□□□ -1.49
Upf1-201ENSMUST00000075666 Sprr2fO70557 76 aa5.74□□□□□ -1.49
Upf1-201ENSMUST00000075666 Lce1fB9EJP6 147 aa5.72□□□□□ -1.49
Upf1-201ENSMUST00000075666 Lce1cQ9D1C5 147 aa5.72□□□□□ -1.49
Upf1-201ENSMUST00000075666 Lce1lQ9D1G7 135 aa5.72□□□□□ -1.49
Upf1-201ENSMUST00000075666 Sprr2iO70560 76 aa5.72□□□□□ -1.49
Upf1-201ENSMUST00000075666 Gm11562A0PK51 136 aa5.71□□□□□ -1.49
Upf1-201ENSMUST00000075666 Gm10024A0A0A0MQA4 119 aa5.71□□□□□ -1.5
Upf1-201ENSMUST00000075666 Lce1eQ9D139 143 aa5.71□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms