RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Rhox8Q6VSS7 320 aa32.93■■■□□ 2.86
Upf1-201ENSMUST00000075666 Rpgrip1Q9EPQ2 1331 aa31.67■■■□□ 2.66
Upf1-201ENSMUST00000075666 Ehmt2Q9Z148 1263 aaKnown RBP30.67■■■□□ 2.5
Upf1-201ENSMUST00000075666 NischQ80TM9 1593 aa30.13■■■□□ 2.41
Upf1-201ENSMUST00000075666 Acin1Q9JIX8 1338 aaKnown RBP29.86■■■□□ 2.37
Upf1-201ENSMUST00000075666 Las1lA2BE28 776 aaKnown RBP29.84■■■□□ 2.37
Upf1-201ENSMUST00000075666 Ccdc136Q3TVA9 1136 aa29.64■■■□□ 2.34
Upf1-201ENSMUST00000075666 Zeb1Q64318 1117 aa29.38■■■□□ 2.29
Upf1-201ENSMUST00000075666 Ccdc180J3QNE4 1664 aa29.23■■■□□ 2.27
Upf1-201ENSMUST00000075666 Cngb1E1AZ71 1325 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Trim41Q5NCC3 630 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Pcgf6Q99NA9 353 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Wdr66E9Q743 1299 aa29.16■■■□□ 2.26
Upf1-201ENSMUST00000075666 Gab3Q8BSM5 595 aa28.93■■■□□ 2.22
Upf1-201ENSMUST00000075666 Rtl1Q7M732 1744 aa28.91■■■□□ 2.22
Upf1-201ENSMUST00000075666 HrcG5E8J6 738 aa28.87■■■□□ 2.21
Upf1-201ENSMUST00000075666 NefmP08553 848 aa28.7■■■□□ 2.18
Upf1-201ENSMUST00000075666 CenpbP27790 599 aa28.55■■■□□ 2.16
Upf1-201ENSMUST00000075666 Supt5hO55201 1082 aaKnown RBP28.5■■■□□ 2.15
Upf1-201ENSMUST00000075666 Esf1Q3V1V3 845 aaKnown RBP28.45■■■□□ 2.15
Upf1-201ENSMUST00000075666 Abcc9P70170 1546 aa28.45■■■□□ 2.15
Upf1-201ENSMUST00000075666 Pelp1Q9DBD5 1123 aaKnown RBP28.21■■■□□ 2.11
Upf1-201ENSMUST00000075666 UbtfP25976 765 aaKnown RBP28.15■■■□□ 2.1
Upf1-201ENSMUST00000075666 Cdk11bP24788 784 aaKnown RBP28.12■■■□□ 2.09
Upf1-201ENSMUST00000075666 Myt1lP97500 1187 aa28.07■■■□□ 2.08
Upf1-201ENSMUST00000075666 Myt1Q8CFC2 1127 aa28.04■■■□□ 2.08
Upf1-201ENSMUST00000075666 Npm2Q80W85 207 aa27.96■■■□□ 2.07
Upf1-201ENSMUST00000075666 Nop58Q6DFW4 536 aaKnown RBP27.89■■■□□ 2.06
Upf1-201ENSMUST00000075666 Neurod1Q60867 357 aa27.86■■■□□ 2.05
Upf1-201ENSMUST00000075666 Dcaf1Q80TR8 1506 aa27.73■■■□□ 2.03
Upf1-201ENSMUST00000075666 Ube2uB1AUC4 352 aa27.7■■■□□ 2.03
Upf1-201ENSMUST00000075666 Mier1Q5UAK0 511 aa27.68■■■□□ 2.02
Upf1-201ENSMUST00000075666 Ppargc1bQ8VHJ7 1014 aa27.66■■■□□ 2.02
Upf1-201ENSMUST00000075666 Abcc8B2RUS7 1588 aa27.65■■■□□ 2.02
Upf1-201ENSMUST00000075666 Stra8P70278 393 aa27.61■■■□□ 2.01
Upf1-201ENSMUST00000075666 Tnnt3Q9QZ47 272 aa27.45■■□□□ 1.99
Upf1-201ENSMUST00000075666 Sall2Q9QX96 1004 aa27.41■■□□□ 1.98
Upf1-201ENSMUST00000075666 Zcchc6Q5BLK4 1491 aaKnown RBP27.39■■□□□ 1.97
Upf1-201ENSMUST00000075666 Anks4bQ8K3X6 423 aa27.37■■□□□ 1.97
Upf1-201ENSMUST00000075666 Slc24a1Q91WD8 1130 aa27.34■■□□□ 1.97
Upf1-201ENSMUST00000075666 TonslQ6NZL6 1363 aa27.32■■□□□ 1.96
Upf1-201ENSMUST00000075666 Csrnp3P59055 597 aa27.3■■□□□ 1.96
Upf1-201ENSMUST00000075666 ClspnQ80YR7 1315 aa27.25■■□□□ 1.95
Upf1-201ENSMUST00000075666 Amer1Q7TS75 1132 aa27.15■■□□□ 1.94
Upf1-201ENSMUST00000075666 Cep164Q5DU05 1446 aa27.07■■□□□ 1.92
Upf1-201ENSMUST00000075666 Aplp2Q06335 707 aa27.07■■□□□ 1.92
Upf1-201ENSMUST00000075666 DiexfQ8BTT6 772 aaKnown RBP27.05■■□□□ 1.92
Upf1-201ENSMUST00000075666 Gm38655A0A286YDK6 273 aa27.03■■□□□ 1.92
Upf1-201ENSMUST00000075666 NclP09405 707 aaKnown RBP27■■□□□ 1.91
Upf1-201ENSMUST00000075666 Ttbk1Q6PCN3 1308 aa26.98■■□□□ 1.91
Upf1-201ENSMUST00000075666 1700123L14RikQ3V2K7 440 aa26.94■■□□□ 1.9
Upf1-201ENSMUST00000075666 Fam50aQ9WV03 339 aaKnown RBP26.85■■□□□ 1.89
Upf1-201ENSMUST00000075666 Chic1Q8CBW7 227 aa26.85■■□□□ 1.89
Upf1-201ENSMUST00000075666 Rtl5Q5DTT4 599 aa26.83■■□□□ 1.89
Upf1-201ENSMUST00000075666 Ap3b1Q9Z1T1 1105 aa26.83■■□□□ 1.89
Upf1-201ENSMUST00000075666 Gm35339A0A140LHH9 1649 aa26.8■■□□□ 1.88
Upf1-201ENSMUST00000075666 Eif5bQ05D44 1216 aaKnown RBP26.77■■□□□ 1.88
Upf1-201ENSMUST00000075666 Anp32aO35381 247 aa26.75■■□□□ 1.87
Upf1-201ENSMUST00000075666 Il27Q8K3I6 234 aa26.72■■□□□ 1.87
Upf1-201ENSMUST00000075666 NrdcQ8BHG1 1161 aa26.72■■□□□ 1.87
Upf1-201ENSMUST00000075666 Plekhg3Q4VAC9 1341 aa26.69■■□□□ 1.86
Upf1-201ENSMUST00000075666 4933416C03RikQ3V063 378 aa26.57■■□□□ 1.84
Upf1-201ENSMUST00000075666 Aebp2Q9Z248 504 aaKnown RBP26.54■■□□□ 1.84
Upf1-201ENSMUST00000075666 Mapk8ip2Q9ERE9 830 aa26.53■■□□□ 1.84
Upf1-201ENSMUST00000075666 Eid3Q3V124 375 aa26.52■■□□□ 1.84
Upf1-201ENSMUST00000075666 Rb1cc1Q9ESK9 1588 aa26.49■■□□□ 1.83
Upf1-201ENSMUST00000075666 Brd4Q9ESU6 1400 aaKnown RBP26.36■■□□□ 1.81
Upf1-201ENSMUST00000075666 NeflP08551 543 aa26.33■■□□□ 1.81
Upf1-201ENSMUST00000075666 Clip1Q922J3 1391 aa26.3■■□□□ 1.8
Upf1-201ENSMUST00000075666 Anp32bQ9EST5 272 aaKnown RBP26.25■■□□□ 1.79
Upf1-201ENSMUST00000075666 Fam71e1A1L3C1 212 aa26.23■■□□□ 1.79
Upf1-201ENSMUST00000075666 Calr4Q3TQS0 420 aa26.21■■□□□ 1.79
Upf1-201ENSMUST00000075666 Lmod2Q3UHZ5 550 aa26.18■■□□□ 1.78
Upf1-201ENSMUST00000075666 Ppp4r2Q0VGB7 417 aa26.05■■□□□ 1.76
Upf1-201ENSMUST00000075666 Rsf1E9PWW9 1441 aaKnown RBP26.01■■□□□ 1.75
Upf1-201ENSMUST00000075666 DaxxO35613 739 aa25.99■■□□□ 1.75
Upf1-201ENSMUST00000075666 Baz1aO88379 1555 aa25.99■■□□□ 1.75
Upf1-201ENSMUST00000075666 Wdr43Q6ZQL4 677 aaKnown RBP25.92■■□□□ 1.74
Upf1-201ENSMUST00000075666 Hnrnpul2Q00PI9 745 aaKnown RBP25.92■■□□□ 1.74
Upf1-201ENSMUST00000075666 SafbD3YXK2 937 aaKnown RBP25.89■■□□□ 1.74
Upf1-201ENSMUST00000075666 Bcl11aQ9QYE3 773 aa25.89■■□□□ 1.74
Upf1-201ENSMUST00000075666 Golga3P55937 1487 aa25.86■■□□□ 1.73
Upf1-201ENSMUST00000075666 Ccer2J3QPU5 274 aa25.84■■□□□ 1.73
Upf1-201ENSMUST00000075666 Mrs2Q5NCE8 434 aa25.74■■□□□ 1.71
Upf1-201ENSMUST00000075666 BlmO88700 1416 aa25.6■■□□□ 1.69
Upf1-201ENSMUST00000075666 NacadQ5SWP3 1504 aa25.6■■□□□ 1.69
Upf1-201ENSMUST00000075666 Ccdc88bQ4QRL3 1481 aa25.59■■□□□ 1.69
Upf1-201ENSMUST00000075666 Ccdc9Q8VC31 543 aaKnown RBP25.56■■□□□ 1.68
Upf1-201ENSMUST00000075666 Npm1Q61937 292 aaKnown RBP25.54■■□□□ 1.68
Upf1-201ENSMUST00000075666 Setd5Q5XJV7 1441 aa25.53■■□□□ 1.68
Upf1-201ENSMUST00000075666 Os9Q8K2C7 672 aa25.52■■□□□ 1.68
Upf1-201ENSMUST00000075666 4930567H17RikQ3V0K5 233 aa25.52■■□□□ 1.68
Upf1-201ENSMUST00000075666 Hsp90aa1P07901 733 aaKnown RBP25.51■■□□□ 1.67
Upf1-201ENSMUST00000075666 Zbtb4Q5F293 982 aa25.46■■□□□ 1.67
Upf1-201ENSMUST00000075666 P3h3Q8CG70 732 aa25.45■■□□□ 1.66
Upf1-201ENSMUST00000075666 Chic2Q9D9G3 165 aa25.43■■□□□ 1.66
Upf1-201ENSMUST00000075666 Ccdc27Q3V036 639 aa25.41■■□□□ 1.66
Upf1-201ENSMUST00000075666 Zbtb7cQ8VCZ7 619 aa25.4■■□□□ 1.66
Upf1-201ENSMUST00000075666 Upf2A2AT37 1269 aaKnown RBP25.36■■□□□ 1.65
Upf1-201ENSMUST00000075666 Eea1Q8BL66 1411 aa25.35■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms