RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Rhox8Q6VSS7 320 aa32.93■■■□□ 2.86
Upf1-201ENSMUST00000075666 Rpgrip1Q9EPQ2 1331 aa31.67■■■□□ 2.66
Upf1-201ENSMUST00000075666 Ehmt2Q9Z148 1263 aaKnown RBP30.67■■■□□ 2.5
Upf1-201ENSMUST00000075666 NischQ80TM9 1593 aa30.13■■■□□ 2.41
Upf1-201ENSMUST00000075666 Acin1Q9JIX8 1338 aaKnown RBP29.86■■■□□ 2.37
Upf1-201ENSMUST00000075666 Las1lA2BE28 776 aaKnown RBP29.84■■■□□ 2.37
Upf1-201ENSMUST00000075666 Ccdc136Q3TVA9 1136 aa29.64■■■□□ 2.34
Upf1-201ENSMUST00000075666 Zeb1Q64318 1117 aa29.38■■■□□ 2.29
Upf1-201ENSMUST00000075666 Ccdc180J3QNE4 1664 aa29.23■■■□□ 2.27
Upf1-201ENSMUST00000075666 Cngb1E1AZ71 1325 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Trim41Q5NCC3 630 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Pcgf6Q99NA9 353 aa29.19■■■□□ 2.26
Upf1-201ENSMUST00000075666 Wdr66E9Q743 1299 aa29.16■■■□□ 2.26
Upf1-201ENSMUST00000075666 Gab3Q8BSM5 595 aa28.93■■■□□ 2.22
Upf1-201ENSMUST00000075666 Rtl1Q7M732 1744 aa28.91■■■□□ 2.22
Upf1-201ENSMUST00000075666 HrcG5E8J6 738 aa28.87■■■□□ 2.21
Upf1-201ENSMUST00000075666 NefmP08553 848 aa28.7■■■□□ 2.18
Upf1-201ENSMUST00000075666 CenpbP27790 599 aa28.55■■■□□ 2.16
Upf1-201ENSMUST00000075666 Supt5hO55201 1082 aaKnown RBP28.5■■■□□ 2.15
Upf1-201ENSMUST00000075666 Esf1Q3V1V3 845 aaKnown RBP28.45■■■□□ 2.15
Upf1-201ENSMUST00000075666 Abcc9P70170 1546 aa28.45■■■□□ 2.15
Upf1-201ENSMUST00000075666 Pelp1Q9DBD5 1123 aaKnown RBP28.21■■■□□ 2.11
Upf1-201ENSMUST00000075666 UbtfP25976 765 aaKnown RBP28.15■■■□□ 2.1
Upf1-201ENSMUST00000075666 Cdk11bP24788 784 aaKnown RBP28.12■■■□□ 2.09
Upf1-201ENSMUST00000075666 Myt1lP97500 1187 aa28.07■■■□□ 2.08
Upf1-201ENSMUST00000075666 Myt1Q8CFC2 1127 aa28.04■■■□□ 2.08
Upf1-201ENSMUST00000075666 Npm2Q80W85 207 aa27.96■■■□□ 2.07
Upf1-201ENSMUST00000075666 Nop58Q6DFW4 536 aaKnown RBP27.89■■■□□ 2.06
Upf1-201ENSMUST00000075666 Neurod1Q60867 357 aa27.86■■■□□ 2.05
Upf1-201ENSMUST00000075666 Dcaf1Q80TR8 1506 aa27.73■■■□□ 2.03
Upf1-201ENSMUST00000075666 Ube2uB1AUC4 352 aa27.7■■■□□ 2.03
Upf1-201ENSMUST00000075666 Mier1Q5UAK0 511 aa27.68■■■□□ 2.02
Upf1-201ENSMUST00000075666 Ppargc1bQ8VHJ7 1014 aa27.66■■■□□ 2.02
Upf1-201ENSMUST00000075666 Abcc8B2RUS7 1588 aa27.65■■■□□ 2.02
Upf1-201ENSMUST00000075666 Stra8P70278 393 aa27.61■■■□□ 2.01
Upf1-201ENSMUST00000075666 Tnnt3Q9QZ47 272 aa27.45■■□□□ 1.99
Upf1-201ENSMUST00000075666 Sall2Q9QX96 1004 aa27.41■■□□□ 1.98
Upf1-201ENSMUST00000075666 Zcchc6Q5BLK4 1491 aaKnown RBP27.39■■□□□ 1.97
Upf1-201ENSMUST00000075666 Anks4bQ8K3X6 423 aa27.37■■□□□ 1.97
Upf1-201ENSMUST00000075666 Slc24a1Q91WD8 1130 aa27.34■■□□□ 1.97
Upf1-201ENSMUST00000075666 TonslQ6NZL6 1363 aa27.32■■□□□ 1.96
Upf1-201ENSMUST00000075666 Csrnp3P59055 597 aa27.3■■□□□ 1.96
Upf1-201ENSMUST00000075666 ClspnQ80YR7 1315 aa27.25■■□□□ 1.95
Upf1-201ENSMUST00000075666 Amer1Q7TS75 1132 aa27.15■■□□□ 1.94
Upf1-201ENSMUST00000075666 Cep164Q5DU05 1446 aa27.07■■□□□ 1.92
Upf1-201ENSMUST00000075666 Aplp2Q06335 707 aa27.07■■□□□ 1.92
Upf1-201ENSMUST00000075666 DiexfQ8BTT6 772 aaKnown RBP27.05■■□□□ 1.92
Upf1-201ENSMUST00000075666 Gm38655A0A286YDK6 273 aa27.03■■□□□ 1.92
Upf1-201ENSMUST00000075666 NclP09405 707 aaKnown RBP27■■□□□ 1.91
Upf1-201ENSMUST00000075666 Ttbk1Q6PCN3 1308 aa26.98■■□□□ 1.91
Upf1-201ENSMUST00000075666 1700123L14RikQ3V2K7 440 aa26.94■■□□□ 1.9
Upf1-201ENSMUST00000075666 Fam50aQ9WV03 339 aaKnown RBP26.85■■□□□ 1.89
Upf1-201ENSMUST00000075666 Chic1Q8CBW7 227 aa26.85■■□□□ 1.89
Upf1-201ENSMUST00000075666 Rtl5Q5DTT4 599 aa26.83■■□□□ 1.89
Upf1-201ENSMUST00000075666 Ap3b1Q9Z1T1 1105 aa26.83■■□□□ 1.89
Upf1-201ENSMUST00000075666 Gm35339A0A140LHH9 1649 aa26.8■■□□□ 1.88
Upf1-201ENSMUST00000075666 Eif5bQ05D44 1216 aaKnown RBP26.77■■□□□ 1.88
Upf1-201ENSMUST00000075666 Anp32aO35381 247 aa26.75■■□□□ 1.87
Upf1-201ENSMUST00000075666 Il27Q8K3I6 234 aa26.72■■□□□ 1.87
Upf1-201ENSMUST00000075666 NrdcQ8BHG1 1161 aa26.72■■□□□ 1.87
Upf1-201ENSMUST00000075666 Plekhg3Q4VAC9 1341 aa26.69■■□□□ 1.86
Upf1-201ENSMUST00000075666 4933416C03RikQ3V063 378 aa26.57■■□□□ 1.84
Upf1-201ENSMUST00000075666 Aebp2Q9Z248 504 aaKnown RBP26.54■■□□□ 1.84
Upf1-201ENSMUST00000075666 Mapk8ip2Q9ERE9 830 aa26.53■■□□□ 1.84
Upf1-201ENSMUST00000075666 Eid3Q3V124 375 aa26.52■■□□□ 1.84
Upf1-201ENSMUST00000075666 Rb1cc1Q9ESK9 1588 aa26.49■■□□□ 1.83
Upf1-201ENSMUST00000075666 Brd4Q9ESU6 1400 aaKnown RBP26.36■■□□□ 1.81
Upf1-201ENSMUST00000075666 NeflP08551 543 aa26.33■■□□□ 1.81
Upf1-201ENSMUST00000075666 Clip1Q922J3 1391 aa26.3■■□□□ 1.8
Upf1-201ENSMUST00000075666 Anp32bQ9EST5 272 aaKnown RBP26.25■■□□□ 1.79
Upf1-201ENSMUST00000075666 Fam71e1A1L3C1 212 aa26.23■■□□□ 1.79
Upf1-201ENSMUST00000075666 Calr4Q3TQS0 420 aa26.21■■□□□ 1.79
Upf1-201ENSMUST00000075666 Lmod2Q3UHZ5 550 aa26.18■■□□□ 1.78
Upf1-201ENSMUST00000075666 Ppp4r2Q0VGB7 417 aa26.05■■□□□ 1.76
Upf1-201ENSMUST00000075666 Rsf1E9PWW9 1441 aaKnown RBP26.01■■□□□ 1.75
Upf1-201ENSMUST00000075666 DaxxO35613 739 aa25.99■■□□□ 1.75
Upf1-201ENSMUST00000075666 Baz1aO88379 1555 aa25.99■■□□□ 1.75
Upf1-201ENSMUST00000075666 Wdr43Q6ZQL4 677 aaKnown RBP25.92■■□□□ 1.74
Upf1-201ENSMUST00000075666 Hnrnpul2Q00PI9 745 aaKnown RBP25.92■■□□□ 1.74
Upf1-201ENSMUST00000075666 SafbD3YXK2 937 aaKnown RBP25.89■■□□□ 1.74
Upf1-201ENSMUST00000075666 Bcl11aQ9QYE3 773 aa25.89■■□□□ 1.74
Upf1-201ENSMUST00000075666 Golga3P55937 1487 aa25.86■■□□□ 1.73
Upf1-201ENSMUST00000075666 Ccer2J3QPU5 274 aa25.84■■□□□ 1.73
Upf1-201ENSMUST00000075666 Mrs2Q5NCE8 434 aa25.74■■□□□ 1.71
Upf1-201ENSMUST00000075666 BlmO88700 1416 aa25.6■■□□□ 1.69
Upf1-201ENSMUST00000075666 NacadQ5SWP3 1504 aa25.6■■□□□ 1.69
Upf1-201ENSMUST00000075666 Ccdc88bQ4QRL3 1481 aa25.59■■□□□ 1.69
Upf1-201ENSMUST00000075666 Ccdc9Q8VC31 543 aaKnown RBP25.56■■□□□ 1.68
Upf1-201ENSMUST00000075666 Npm1Q61937 292 aaKnown RBP25.54■■□□□ 1.68
Upf1-201ENSMUST00000075666 Setd5Q5XJV7 1441 aa25.53■■□□□ 1.68
Upf1-201ENSMUST00000075666 Os9Q8K2C7 672 aa25.52■■□□□ 1.68
Upf1-201ENSMUST00000075666 4930567H17RikQ3V0K5 233 aa25.52■■□□□ 1.68
Upf1-201ENSMUST00000075666 Hsp90aa1P07901 733 aaKnown RBP25.51■■□□□ 1.67
Upf1-201ENSMUST00000075666 Zbtb4Q5F293 982 aa25.46■■□□□ 1.67
Upf1-201ENSMUST00000075666 P3h3Q8CG70 732 aa25.45■■□□□ 1.66
Upf1-201ENSMUST00000075666 Chic2Q9D9G3 165 aa25.43■■□□□ 1.66
Upf1-201ENSMUST00000075666 Ccdc27Q3V036 639 aa25.41■■□□□ 1.66
Upf1-201ENSMUST00000075666 Zbtb7cQ8VCZ7 619 aa25.4■■□□□ 1.66
Upf1-201ENSMUST00000075666 Upf2A2AT37 1269 aaKnown RBP25.36■■□□□ 1.65
Upf1-201ENSMUST00000075666 Eea1Q8BL66 1411 aa25.35■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms