RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gm21798J3QNU5 87 aa9.3□□□□□ -0.92
Vti1b-201ENSMUST00000055262 Krtap1-4Q3V2D6 188 aa9.28□□□□□ -0.92
Vti1b-201ENSMUST00000055262 2310079G19RikQ9D6L6 185 aa9.28□□□□□ -0.92
Vti1b-201ENSMUST00000055262 Gm19668J3QMD1 248 aa9.2□□□□□ -0.94
Vti1b-201ENSMUST00000055262 Gm10643Q3URG9 111 aa9.2□□□□□ -0.94
Vti1b-201ENSMUST00000055262 2210017I01RikA0A0A6YVV1 95 aa9.19□□□□□ -0.94
Vti1b-201ENSMUST00000055262 Krtap13-1Q8K198 168 aa9.16□□□□□ -0.94
Vti1b-201ENSMUST00000055262 Gm11569B1AQB1 180 aa9.08□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Coa5Q99M07 74 aa9.06□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Lce1dQ9D731 133 aa9.06□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Krtap1-5A2A590 122 aa9.05□□□□□ -0.96
Vti1b-201ENSMUST00000055262 SspoQ8CG65 4998 aa9.05□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Lce1a1Q9CQH5 143 aa9.03□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Lce1gQ9D195 139 aa9.03□□□□□ -0.96
Vti1b-201ENSMUST00000055262 Gm11562A0PK51 136 aa8.96□□□□□ -0.97
Vti1b-201ENSMUST00000055262 Smlr1J3QMJ4 66 aa8.96□□□□□ -0.97
Vti1b-201ENSMUST00000055262 Defb1P56386 69 aa8.96□□□□□ -0.97
Vti1b-201ENSMUST00000055262 SptssbQ925E8 76 aa8.92□□□□□ -0.98
Vti1b-201ENSMUST00000055262 Cox6b2Q80ZN9 88 aa8.91□□□□□ -0.98
Vti1b-201ENSMUST00000055262 Krtap3-1A2A591 98 aa8.9□□□□□ -0.98
Vti1b-201ENSMUST00000055262 Prr13Q9CQJ5 137 aa8.83□□□□□ -1
Vti1b-201ENSMUST00000055262 Gm17606F6ZL36 78 aa8.81□□□□□ -1
Vti1b-201ENSMUST00000055262 Pet100P0DJE0 76 aa8.81□□□□□ -1
Vti1b-201ENSMUST00000055262 Tmem258P61166 79 aa8.81□□□□□ -1
Vti1b-201ENSMUST00000055262 Smim20D3Z7Q2 69 aa8.79□□□□□ -1
Vti1b-201ENSMUST00000055262 SnurfQ9WU12 71 aa8.78□□□□□ -1
Vti1b-201ENSMUST00000055262 Krtap17-1A2A5X6 109 aa8.77□□□□□ -1
Vti1b-201ENSMUST00000055262 Gm19935A0A1B0GSF9 52 aa8.72□□□□□ -1.01
Vti1b-201ENSMUST00000055262 Cdc42se1Q8BHL7 80 aa8.71□□□□□ -1.01
Vti1b-201ENSMUST00000055262 Gm20661K7N787 53 aa8.7□□□□□ -1.02
Vti1b-201ENSMUST00000055262 Gm19426M0QWC7 77 aa8.68□□□□□ -1.02
Vti1b-201ENSMUST00000055262 Gm20537G3UYK7 97 aa8.64□□□□□ -1.03
Vti1b-201ENSMUST00000055262 BC029722A0A0N4SW31 51 aa8.63□□□□□ -1.03
Vti1b-201ENSMUST00000055262 B930094E09RikQ8C4T2 136 aa8.62□□□□□ -1.03
Vti1b-201ENSMUST00000055262 Gm10382Q3V0T5 144 aa8.6□□□□□ -1.03
Vti1b-201ENSMUST00000055262 H2al1aQ5M8Q2 105 aa8.58□□□□□ -1.04
Vti1b-201ENSMUST00000055262 H2al1eQ810S6 105 aa8.58□□□□□ -1.04
Vti1b-201ENSMUST00000055262 Krtap9-5A2A5X3 358 aa8.56□□□□□ -1.04
Vti1b-201ENSMUST00000055262 Gm10197F6QEY5 67 aa8.56□□□□□ -1.04
Vti1b-201ENSMUST00000055262 Krtap19-2Q925I0 141 aa8.56□□□□□ -1.04
Vti1b-201ENSMUST00000055262 Serp1Q9Z1W5 66 aa8.53□□□□□ -1.04
Vti1b-201ENSMUST00000055262 Lce1jD3YUU5 139 aa8.51□□□□□ -1.05
Vti1b-201ENSMUST00000055262 Phxr4P15974 95 aa8.51□□□□□ -1.05
Vti1b-201ENSMUST00000055262 A030003K21RikA0A1Y7VIM3 128 aa8.51□□□□□ -1.05
Vti1b-201ENSMUST00000055262 Uqcr11Q9CPX8 56 aa8.5□□□□□ -1.05
Vti1b-201ENSMUST00000055262 Krtap12-1Q9Z287 130 aa8.5□□□□□ -1.05
Vti1b-201ENSMUST00000055262 SmcpP15265 143 aa8.47□□□□□ -1.05
Vti1b-201ENSMUST00000055262 Brk1Q91VR8 75 aa8.45□□□□□ -1.06
Vti1b-201ENSMUST00000055262 Syne2Q6ZWQ0 6874 aaKnown RBP8.44□□□□□ -1.06
Vti1b-201ENSMUST00000055262 Gm11596B1AQB0 205 aa8.42□□□□□ -1.06
Vti1b-201ENSMUST00000055262 CriptO70333 101 aa8.42□□□□□ -1.06
Vti1b-201ENSMUST00000055262 Lce1lQ9D1G7 135 aa8.42□□□□□ -1.06
Vti1b-201ENSMUST00000055262 Limd2Q8BGB5 128 aa8.41□□□□□ -1.06
Vti1b-201ENSMUST00000055262 H2al1bA0A087WP11 105 aa8.4□□□□□ -1.06
Vti1b-201ENSMUST00000055262 Sec61gP60060 68 aa8.38□□□□□ -1.07
Vti1b-201ENSMUST00000055262 Pla2g10Q9QXX3 151 aa8.36□□□□□ -1.07
Vti1b-201ENSMUST00000055262 Rps28P62858 69 aaKnown RBP8.35□□□□□ -1.07
Vti1b-201ENSMUST00000055262 Krtap4-6Q3V4B7 195 aa8.35□□□□□ -1.07
Vti1b-201ENSMUST00000055262 Muc5bE9Q5I3 4800 aa8.34□□□□□ -1.07
Vti1b-201ENSMUST00000055262 Ndufb1P0DN34 57 aa8.32□□□□□ -1.08
Vti1b-201ENSMUST00000055262 Krtap19-9aF8WH65 55 aa8.31□□□□□ -1.08
Vti1b-201ENSMUST00000055262 Spink7Q6IE32 76 aa8.29□□□□□ -1.08
Vti1b-201ENSMUST00000055262 Prm2P07978 107 aa8.28□□□□□ -1.08
Vti1b-201ENSMUST00000055262 Gm9955Q8CEJ8 102 aa8.22□□□□□ -1.09
Vti1b-201ENSMUST00000055262 Gm6358A0A087WPH4 74 aa8.18□□□□□ -1.1
Vti1b-201ENSMUST00000055262 Gm6217A0A1Y7VJK9 128 aa8.13□□□□□ -1.11
Vti1b-201ENSMUST00000055262 Gm17402F6Z0L5 76 aa8.09□□□□□ -1.11
Vti1b-201ENSMUST00000055262 Mdn1A2ANY6 5589 aaKnown RBP8.07□□□□□ -1.12
Vti1b-201ENSMUST00000055262 Sprr2a3Q4KL71 83 aa8.03□□□□□ -1.12
Vti1b-201ENSMUST00000055262 Sprr2a1Q9CQK8 83 aa8.03□□□□□ -1.12
Vti1b-201ENSMUST00000055262 Gm11564A2A4L9 201 aa8.01□□□□□ -1.13
Vti1b-201ENSMUST00000055262 Gm11595B1AQA7 289 aa8.01□□□□□ -1.13
Vti1b-201ENSMUST00000055262 Krtap4-8B1AQA8 209 aa8.01□□□□□ -1.13
Vti1b-201ENSMUST00000055262 Lce1iQ9D6P5 149 aa7.98□□□□□ -1.13
Vti1b-201ENSMUST00000055262 A0A286YCP9 139 aa7.88□□□□□ -1.15
Vti1b-201ENSMUST00000055262 Lce1a2Q9D1K4 149 aa7.85□□□□□ -1.15
Vti1b-201ENSMUST00000055262 Mt2P02798 61 aa7.79□□□□□ -1.16
Vti1b-201ENSMUST00000055262 Krtap4-9B1AQA9 244 aa7.77□□□□□ -1.17
Vti1b-201ENSMUST00000055262 Sox16Q62247 57 aa7.75□□□□□ -1.17
Vti1b-201ENSMUST00000055262 H2al1kJ3QP08 105 aa7.74□□□□□ -1.17
Vti1b-201ENSMUST00000055262 4933415A04RikQ9D443 101 aa7.68□□□□□ -1.18
Vti1b-201ENSMUST00000055262 Mt4P47945 62 aa7.68□□□□□ -1.18
Vti1b-201ENSMUST00000055262 Pcp4P63054 62 aa7.68□□□□□ -1.18
Vti1b-201ENSMUST00000055262 Krtap8-1O08633 61 aa7.66□□□□□ -1.18
Vti1b-201ENSMUST00000055262 Krtap9-3Q3V2C1 136 aa7.6□□□□□ -1.19
Vti1b-201ENSMUST00000055262 H2al1mQ9DAD9 105 aa7.6□□□□□ -1.19
Vti1b-201ENSMUST00000055262 Gm3880A0A1B0GSB3 72 aa7.57□□□□□ -1.2
Vti1b-201ENSMUST00000055262 Lce1hQ9D6R3 140 aa7.56□□□□□ -1.2
Vti1b-201ENSMUST00000055262 Ndufs5Q99LY9 106 aa7.5□□□□□ -1.21
Vti1b-201ENSMUST00000055262 Gm21887J3QQ04 176 aa7.49□□□□□ -1.21
Vti1b-201ENSMUST00000055262 Krtap4-13Q9D7P3 165 aa7.49□□□□□ -1.21
Vti1b-201ENSMUST00000055262 Fsip2A2ARZ3 6995 aa7.44□□□□□ -1.22
Vti1b-201ENSMUST00000055262 Camk2n1Q6QWF9 78 aa7.43□□□□□ -1.22
Vti1b-201ENSMUST00000055262 Krtap22-2J3QNX6 67 aa7.42□□□□□ -1.22
Vti1b-201ENSMUST00000055262 Lce1bQ9D149 137 aa7.39□□□□□ -1.23
Vti1b-201ENSMUST00000055262 Krtap6-3A0A087WQL6 57 aa7.38□□□□□ -1.23
Vti1b-201ENSMUST00000055262 Krtap31-2Q8CAY5 177 aa7.38□□□□□ -1.23
Vti1b-201ENSMUST00000055262 Gm3646F6S692 53 aa7.36□□□□□ -1.23
Vti1b-201ENSMUST00000055262 Sprr2kO70562 68 aa7.35□□□□□ -1.23
Vti1b-201ENSMUST00000055262 Gm10337F7DEP7 55 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 181.9 ms