RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Fras1Q80T14 4010 aa7.32□□□□□ -1.24
Scaf4-201ENSMUST00000039280 Krtap13-1Q8K198 168 aa7.29□□□□□ -1.24
Scaf4-201ENSMUST00000039280 Crct1Q6PAI5 102 aa7.27□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Krtap3-1A2A591 98 aa7.27□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Hectd4E9Q2E4 4418 aa7.26□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Fat1A0A1L1SQU7 4645 aa7.25□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Lrp1Q91ZX7 4545 aaKnown RBP7.24□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Dnah7aE9Q0T8 4024 aa7.22□□□□□ -1.25
Scaf4-201ENSMUST00000039280 Mycbp2Q7TPH6 4711 aa7.22□□□□□ -1.25
Scaf4-201ENSMUST00000039280 SacsQ9JLC8 4582 aa7.18□□□□□ -1.26
Scaf4-201ENSMUST00000039280 Pkd1O08852 4293 aa7.15□□□□□ -1.27
Scaf4-201ENSMUST00000039280 Gm17402F6Z0L5 76 aa7.1□□□□□ -1.27
Scaf4-201ENSMUST00000039280 Fat3Q8BNA6 4555 aa7.05□□□□□ -1.28
Scaf4-201ENSMUST00000039280 Kiaa1109A2AAE1 5005 aa7.05□□□□□ -1.28
Scaf4-201ENSMUST00000039280 Krtap7-1Q9D3I6 87 aa7□□□□□ -1.29
Scaf4-201ENSMUST00000039280 Herc2Q4U2R1 4836 aa6.97□□□□□ -1.29
Scaf4-201ENSMUST00000039280 HydinQ80W93 5154 aa6.97□□□□□ -1.29
Scaf4-201ENSMUST00000039280 Fat2Q5F226 4351 aa6.96□□□□□ -1.3
Scaf4-201ENSMUST00000039280 Ryr2E9Q401 4966 aaKnown RBP6.95□□□□□ -1.3
Scaf4-201ENSMUST00000039280 Tnp1P10856 55 aa6.95□□□□□ -1.3
Scaf4-201ENSMUST00000039280 Vps13bQ80TY5 3993 aa6.94□□□□□ -1.3
Scaf4-201ENSMUST00000039280 Lrp2A2ARV4 4660 aa6.89□□□□□ -1.31
Scaf4-201ENSMUST00000039280 Dnah8Q91XQ0 4731 aa6.88□□□□□ -1.31
Scaf4-201ENSMUST00000039280 Krtap1-5A2A590 122 aa6.84□□□□□ -1.31
Scaf4-201ENSMUST00000039280 Gm19668J3QMD1 248 aa6.76□□□□□ -1.33
Scaf4-201ENSMUST00000039280 Abca13Q5SSE9 5034 aa6.74□□□□□ -1.33
Scaf4-201ENSMUST00000039280 Gm19402J3QJV4 266 aa6.7□□□□□ -1.34
Scaf4-201ENSMUST00000039280 Sprr2a3Q4KL71 83 aa6.64□□□□□ -1.35
Scaf4-201ENSMUST00000039280 Sprr2a1Q9CQK8 83 aa6.64□□□□□ -1.35
Scaf4-201ENSMUST00000039280 Gm18596A0A1W2P860 280 aa6.64□□□□□ -1.35
Scaf4-201ENSMUST00000039280 LorP18165 486 aa6.64□□□□□ -1.35
Scaf4-201ENSMUST00000039280 Kmt2cQ8BRH4 4903 aa6.6□□□□□ -1.35
Scaf4-201ENSMUST00000039280 Pkhd1l1Q80ZA4 4249 aa6.58□□□□□ -1.36
Scaf4-201ENSMUST00000039280 Krtap1-4Q3V2D6 188 aa6.58□□□□□ -1.36
Scaf4-201ENSMUST00000039280 Dnhd1D3Z2X2 4750 aa6.57□□□□□ -1.36
Scaf4-201ENSMUST00000039280 Krtap16-3Q8C1I6 86 aa6.57□□□□□ -1.36
Scaf4-201ENSMUST00000039280 Lce1mQ9CR91 182 aa6.53□□□□□ -1.36
Scaf4-201ENSMUST00000039280 Pkhd1E9PZ36 4059 aa6.51□□□□□ -1.37
Scaf4-201ENSMUST00000039280 Birc6O88738 4882 aa6.49□□□□□ -1.37
Scaf4-201ENSMUST00000039280 Krtap19-3Q925H6 87 aa6.49□□□□□ -1.37
Scaf4-201ENSMUST00000039280 Krtap19-1Q925H2 87 aa6.45□□□□□ -1.38
Scaf4-201ENSMUST00000039280 Krtap19-9aF8WH65 55 aa6.42□□□□□ -1.38
Scaf4-201ENSMUST00000039280 Krtap12-1Q9Z287 130 aa6.38□□□□□ -1.39
Scaf4-201ENSMUST00000039280 PcloQ9QYX7 5068 aa6.2□□□□□ -1.42
Scaf4-201ENSMUST00000039280 Krtap1-3A2A588 173 aa6.18□□□□□ -1.42
Scaf4-201ENSMUST00000039280 Herc1E9PZP8 4859 aa6.17□□□□□ -1.42
Scaf4-201ENSMUST00000039280 Prm1P02319 51 aa6.12□□□□□ -1.43
Scaf4-201ENSMUST00000039280 Ubr4A2AN08 5180 aa6.08□□□□□ -1.44
Scaf4-201ENSMUST00000039280 Krtap19-9bQ99NG9 58 aa6.06□□□□□ -1.44
Scaf4-201ENSMUST00000039280 Lce1jD3YUU5 139 aa6.06□□□□□ -1.44
Scaf4-201ENSMUST00000039280 Krtap9-5A2A5X3 358 aa6.05□□□□□ -1.44
Scaf4-201ENSMUST00000039280 Gm7735D3YX18 52 aa6.05□□□□□ -1.44
Scaf4-201ENSMUST00000039280 Gm9789Q8BIG3 52 aa6.02□□□□□ -1.45
Scaf4-201ENSMUST00000039280 4933428G20RikQ9D3X4 101 aa5.98□□□□□ -1.45
Scaf4-201ENSMUST00000039280 4932415D10RikA0A1W2P6U8 4986 aa5.97□□□□□ -1.45
Scaf4-201ENSMUST00000039280 Ush2AQ2QI47 5193 aa5.91□□□□□ -1.46
Scaf4-201ENSMUST00000039280 ZanO88799 5376 aa5.89□□□□□ -1.47
Scaf4-201ENSMUST00000039280 Krtap19-2Q925I0 141 aa5.88□□□□□ -1.47
Scaf4-201ENSMUST00000039280 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Scaf4-201ENSMUST00000039280 Fat4Q2PZL6 4981 aa5.82□□□□□ -1.48
Scaf4-201ENSMUST00000039280 2310046K23RikA0A0A6YVW6 87 aa5.79□□□□□ -1.48
Scaf4-201ENSMUST00000039280 Gm6358A0A087WPH4 74 aa5.78□□□□□ -1.48
Scaf4-201ENSMUST00000039280 Mdn1A2ANY6 5589 aaKnown RBP5.7□□□□□ -1.5
Scaf4-201ENSMUST00000039280 Mt2P02798 61 aa5.7□□□□□ -1.5
Scaf4-201ENSMUST00000039280 Hmcn2A2AJ76 5100 aa5.67□□□□□ -1.5
Scaf4-201ENSMUST00000039280 Gm10061D3Z714 54 aa5.66□□□□□ -1.5
Scaf4-201ENSMUST00000039280 Krtap17-1A2A5X6 109 aa5.63□□□□□ -1.51
Scaf4-201ENSMUST00000039280 Rnf213E9Q555 5152 aaKnown RBP5.62□□□□□ -1.51
Scaf4-201ENSMUST00000039280 Lce1iQ9D6P5 149 aa5.6□□□□□ -1.51
Scaf4-201ENSMUST00000039280 Lce1a2Q9D1K4 149 aa5.54□□□□□ -1.52
Scaf4-201ENSMUST00000039280 Krtap22-2J3QNX6 67 aa5.49□□□□□ -1.53
Scaf4-201ENSMUST00000039280 Gm11569B1AQB1 180 aa5.42□□□□□ -1.54
Scaf4-201ENSMUST00000039280 Gm10272F7CZ33 110 aa5.42□□□□□ -1.54
Scaf4-201ENSMUST00000039280 Sprr2kO70562 68 aa5.35□□□□□ -1.55
Scaf4-201ENSMUST00000039280 Krtap9-3Q3V2C1 136 aa5.27□□□□□ -1.57
Scaf4-201ENSMUST00000039280 Lce1hQ9D6R3 140 aa5.22□□□□□ -1.57
Scaf4-201ENSMUST00000039280 Gm10100J3QK64 120 aa5.18□□□□□ -1.58
Scaf4-201ENSMUST00000039280 Lce3bQ9CQM7 98 aa5.18□□□□□ -1.58
Scaf4-201ENSMUST00000039280 Sprr2gO70558 76 aa5.16□□□□□ -1.58
Scaf4-201ENSMUST00000039280 Muc5bE9Q5I3 4800 aa5.14□□□□□ -1.59
Scaf4-201ENSMUST00000039280 Gm38119A0A0A6YX29 146 aa5.13□□□□□ -1.59
Scaf4-201ENSMUST00000039280 SspoQ8CG65 4998 aa5.12□□□□□ -1.59
Scaf4-201ENSMUST00000039280 Krtap4-6Q3V4B7 195 aa5.07□□□□□ -1.6
Scaf4-201ENSMUST00000039280 Lce3cQ91V05 98 aa5.06□□□□□ -1.6
Scaf4-201ENSMUST00000039280 Gm10142J3KMP7 120 aa5.05□□□□□ -1.6
Scaf4-201ENSMUST00000039280 Lce1dQ9D731 133 aa5.01□□□□□ -1.61
Scaf4-201ENSMUST00000039280 Krtap4-2B1AQ85 167 aa4.96□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Gm11938Q9D3H4 131 aa4.95□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Lce3eF8VQJ0 98 aa4.94□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Lce3fQ6PAI4 98 aa4.94□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Syne1Q6ZWR6 8799 aa4.92□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Mt4P47945 62 aa4.92□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Lce1gQ9D195 139 aa4.9□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Fsip2A2ARZ3 6995 aa4.9□□□□□ -1.62
Scaf4-201ENSMUST00000039280 Krtap4-1Q3UUY3 169 aa4.89□□□□□ -1.63
Scaf4-201ENSMUST00000039280 Sprr2dO70555 85 aa4.88□□□□□ -1.63
Scaf4-201ENSMUST00000039280 Lce3dE9Q8V1 98 aa4.84□□□□□ -1.63
Scaf4-201ENSMUST00000039280 Lce1eQ9D139 143 aa4.79□□□□□ -1.64
Scaf4-201ENSMUST00000039280 Gm11596B1AQB0 205 aa4.77□□□□□ -1.65
Scaf4-201ENSMUST00000039280 Krtap19-4Q925H7 84 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms