RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Gm3880A0A1B0GSB3 72 aa2.81□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm4491E0CX42 125 aa2.8□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm21798J3QNU5 87 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 Defb18Q30KP5 85 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm17349F7BGH6 99 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 CriptO70333 101 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 Krtap5-1Q64507 230 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 Dync2h1Q45VK7 4306 aa2.79□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm7735D3YX18 52 aa2.78□□□□□ -1.96
Clk1-201ENSMUST00000034868 A930033H14RikG5E8X6 103 aa2.78□□□□□ -1.96
Clk1-201ENSMUST00000034868 Ly6g6cQ9Z1Q4 126 aa2.78□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm4553A0A1B0GSA9 284 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Prm1P02319 51 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Defb38Q7TNV7 63 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Herc1E9PZP8 4859 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Gm11627A6PWP4 55 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Gm10139O88245 57 aa2.77□□□□□ -1.97
Clk1-201ENSMUST00000034868 Herc2Q4U2R1 4836 aa2.76□□□□□ -1.97
Clk1-201ENSMUST00000034868 Gm20537G3UYK7 97 aa2.75□□□□□ -1.97
Clk1-201ENSMUST00000034868 Krtap9-3Q3V2C1 136 aa2.75□□□□□ -1.97
Clk1-201ENSMUST00000034868 Krtap4-6Q3V4B7 195 aa2.75□□□□□ -1.97
Clk1-201ENSMUST00000034868 Gm4707V9GXN5 68 aa2.75□□□□□ -1.97
Clk1-201ENSMUST00000034868 Syne2Q6ZWQ0 6874 aaKnown RBP2.75□□□□□ -1.97
Clk1-201ENSMUST00000034868 Sprr1aQ62266 144 aa2.74□□□□□ -1.97
Clk1-201ENSMUST00000034868 Adm2Q7TNK8 150 aa2.74□□□□□ -1.97
Clk1-201ENSMUST00000034868 Mapk1ip1lQ8BH93 242 aa2.74□□□□□ -1.97
Clk1-201ENSMUST00000034868 Srrm2Q8BTI8 2703 aaKnown RBP2.73□□□□□ -1.97
Clk1-201ENSMUST00000034868 Cox6b2Q80ZN9 88 aa2.72□□□□□ -1.97
Clk1-201ENSMUST00000034868 Krtap9-1Q64526 186 aa2.72□□□□□ -1.97
Clk1-201ENSMUST00000034868 Gm40193A0A1B0GT39 78 aa2.71□□□□□ -1.98
Clk1-201ENSMUST00000034868 PrkdcP97313 4128 aa2.71□□□□□ -1.98
Clk1-201ENSMUST00000034868 Gm4559A4IF42 199 aa2.7□□□□□ -1.98
Clk1-201ENSMUST00000034868 Gm17416Q30KP4 66 aa2.7□□□□□ -1.98
Clk1-201ENSMUST00000034868 Gm10382Q3V0T5 144 aa2.69□□□□□ -1.98
Clk1-201ENSMUST00000034868 Leap2Q91V13 76 aa2.69□□□□□ -1.98
Clk1-201ENSMUST00000034868 PlecQ9QXS1 4691 aaKnown RBP2.69□□□□□ -1.98
Clk1-201ENSMUST00000034868 Ank2Q8C8R3 3898 aa2.69□□□□□ -1.98
Clk1-201ENSMUST00000034868 CubnQ9JLB4 3623 aa2.69□□□□□ -1.98
Clk1-201ENSMUST00000034868 PtprqP0C5E4 2300 aa2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 Hspg2Q05793 3707 aaKnown RBP2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 2310079G19RikQ9D6L6 185 aa2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 AplnQ9R0R4 77 aa2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 Xirp2Q4U4S6 3784 aa2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 Stab2Q8R4U0 2559 aa2.67□□□□□ -1.98
Clk1-201ENSMUST00000034868 Gm11568A2A4M2 211 aa2.65□□□□□ -1.99
Clk1-201ENSMUST00000034868 Dnah1E9Q8T7 4250 aa2.65□□□□□ -1.99
Clk1-201ENSMUST00000034868 Dnah11E9Q7N9 4488 aa2.64□□□□□ -1.99
Clk1-201ENSMUST00000034868 Gm16253D3Z167 63 aa2.63□□□□□ -1.99
Clk1-201ENSMUST00000034868 Krtap5-2Q9D5Z7 189 aa2.63□□□□□ -1.99
Clk1-201ENSMUST00000034868 HrnrQ8VHD8 2496 aa2.62□□□□□ -1.99
Clk1-201ENSMUST00000034868 BsnO88737 3942 aa2.62□□□□□ -1.99
Clk1-201ENSMUST00000034868 Krtap7-1Q9D3I6 87 aa2.62□□□□□ -1.99
Clk1-201ENSMUST00000034868 Gm7579A0A1B0GRJ4 243 aa2.61□□□□□ -1.99
Clk1-201ENSMUST00000034868 Fras1Q80T14 4010 aa2.61□□□□□ -1.99
Clk1-201ENSMUST00000034868 Gm10999F6Q4M4 69 aa2.61□□□□□ -1.99
Clk1-201ENSMUST00000034868 Dnah3Q8BW94 4083 aa2.61□□□□□ -1.99
Clk1-201ENSMUST00000034868 Gm10642Q3TWM1 71 aa2.6□□□□□ -1.99
Clk1-201ENSMUST00000034868 Gm9789Q8BIG3 52 aa2.6□□□□□ -1.99
Clk1-201ENSMUST00000034868 Brwd1Q921C3 2304 aa2.6□□□□□ -1.99
Clk1-201ENSMUST00000034868 Defb1P56386 69 aa2.59□□□□□ -2
Clk1-201ENSMUST00000034868 Gm9955Q8CEJ8 102 aa2.59□□□□□ -2
Clk1-201ENSMUST00000034868 D6Ertd527eA0A0N4SWI3 464 aa2.58□□□□□ -2
Clk1-201ENSMUST00000034868 Rpl37Q9D823 97 aa2.58□□□□□ -2
Clk1-201ENSMUST00000034868 Csmd3Q80T79 3707 aa2.58□□□□□ -2
Clk1-201ENSMUST00000034868 Kmt2aP55200 3966 aa2.57□□□□□ -2
Clk1-201ENSMUST00000034868 Dnah17Q69Z23 4481 aa2.56□□□□□ -2
Clk1-201ENSMUST00000034868 Gm10318A0A1W2P728 225 aa2.56□□□□□ -2
Clk1-201ENSMUST00000034868 Mycbp2Q7TPH6 4711 aa2.55□□□□□ -2
Clk1-201ENSMUST00000034868 Krtap1-4Q3V2D6 188 aa2.55□□□□□ -2
Clk1-201ENSMUST00000034868 Ush2AQ2QI47 5193 aa2.54□□□□□ -2
Clk1-201ENSMUST00000034868 Dnhd1D3Z2X2 4750 aa2.5□□□□□ -2.01
Clk1-201ENSMUST00000034868 Hmcn1D3YXG0 5634 aa2.49□□□□□ -2.01
Clk1-201ENSMUST00000034868 Gm17606F6ZL36 78 aa2.49□□□□□ -2.01
Clk1-201ENSMUST00000034868 Hmcn2A2AJ76 5100 aa2.49□□□□□ -2.01
Clk1-201ENSMUST00000034868 Dnah9B1AR51 4484 aa2.49□□□□□ -2.01
Clk1-201ENSMUST00000034868 Hectd4E9Q2E4 4418 aa2.49□□□□□ -2.01
Clk1-201ENSMUST00000034868 Fat4Q2PZL6 4981 aa2.48□□□□□ -2.01
Clk1-201ENSMUST00000034868 SacsQ9JLC8 4582 aa2.47□□□□□ -2.01
Clk1-201ENSMUST00000034868 Dnah7bL7N1Y0 4068 aa2.47□□□□□ -2.01
Clk1-201ENSMUST00000034868 Dnah2P0C6F1 4456 aa2.46□□□□□ -2.02
Clk1-201ENSMUST00000034868 Krtap5-5Q2TA51 241 aa2.45□□□□□ -2.02
Clk1-201ENSMUST00000034868 Dnah7aE9Q0T8 4024 aa2.44□□□□□ -2.02
Clk1-201ENSMUST00000034868 Defb39Q70KL3 74 aa2.44□□□□□ -2.02
Clk1-201ENSMUST00000034868 Vps13dB1ART2 4390 aa2.44□□□□□ -2.02
Clk1-201ENSMUST00000034868 NbdyA0A0N4SUI7 68 aa2.43□□□□□ -2.02
Clk1-201ENSMUST00000034868 Pkd1O08852 4293 aa2.43□□□□□ -2.02
Clk1-201ENSMUST00000034868 ApobE9Q414 4505 aa2.42□□□□□ -2.02
Clk1-201ENSMUST00000034868 Dnah6E9Q0B6 4144 aa2.42□□□□□ -2.02
Clk1-201ENSMUST00000034868 Dnah10D3YYQ8 4591 aa2.4□□□□□ -2.03
Clk1-201ENSMUST00000034868 Dnah7cA0A087WR13 4024 aa2.4□□□□□ -2.03
Clk1-201ENSMUST00000034868 Gm5767A0A0J9YTU8 78 aa2.39□□□□□ -2.03
Clk1-201ENSMUST00000034868 Dnah14A0A140LIJ4 4489 aa2.39□□□□□ -2.03
Clk1-201ENSMUST00000034868 Gm19426M0QWC7 77 aa2.38□□□□□ -2.03
Clk1-201ENSMUST00000034868 Gpr15lA0A0B4J1N3 78 aa2.38□□□□□ -2.03
Clk1-201ENSMUST00000034868 Spaca4Q80ZQ0 127 aa2.38□□□□□ -2.03
Clk1-201ENSMUST00000034868 Krtap19-3Q925H6 87 aa2.37□□□□□ -2.03
Clk1-201ENSMUST00000034868 Stard9Q80TF6 4561 aa2.37□□□□□ -2.03
Clk1-201ENSMUST00000034868 Huwe1Q7TMY8 4377 aaKnown RBP2.33□□□□□ -2.04
Clk1-201ENSMUST00000034868 Eppk1Q8R0W0 6548 aa2.33□□□□□ -2.04
Clk1-201ENSMUST00000034868 Gm9918Q8BUR5 174 aa2.32□□□□□ -2.04
Retrieved 100 of 22,080 RNA–protein pairs in 106.5 ms