RNA–Protein interactions for RNA: ENSMUST00000214095.1

Ubp1-204, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-204ENSMUST00000214095 Gm28374F6SG70 93 aa13.55□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Phxr4P15974 95 aa13.55□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Gm9918Q8BUR5 174 aa13.54□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Bean1Q9EQG5 255 aa13.53□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Gm10160F6Y577 67 aa13.52□□□□□ -0.24
Ubp1-204ENSMUST00000214095 1600014C23RikQ9DAX4 101 aa13.52□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Gm16253D3Z167 63 aa13.5□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Defb39Q70KL3 74 aa13.47□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Defb38Q7TNV7 63 aa13.46□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Dnah7cA0A087WR13 4024 aa13.45□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Tnp2P11378 117 aa13.44□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Gpr15lA0A0B4J1N3 78 aa13.43□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Ccdc179J3QM76 67 aa13.43□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Dnah5Q8VHE6 4621 aa13.42□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Sox16Q62247 57 aa13.39□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Krtap14O08640 167 aa13.39□□□□□ -0.27
Ubp1-204ENSMUST00000214095 2310050C09RikG5E8Z3 280 aa13.38□□□□□ -0.27
Ubp1-204ENSMUST00000214095 4933415A04RikQ9D443 101 aa13.38□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Ly6g6cQ9Z1Q4 126 aa13.34□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Hectd4E9Q2E4 4418 aa13.33□□□□□ -0.28
Ubp1-204ENSMUST00000214095 Gm20661K7N787 53 aa13.28□□□□□ -0.28
Ubp1-204ENSMUST00000214095 Dnah7aE9Q0T8 4024 aa13.27□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Defb11Q8R2I7 77 aa13.24□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Defb13Q8R2I4 64 aa13.24□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Krtap10-4Q08EG8 221 aa13.23□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Dnah2P0C6F1 4456 aa13.21□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Cypt15B1AXS0 87 aa13.19□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Gm21798J3QNU5 87 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Vps13dB1ART2 4390 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Gm10643Q3URG9 111 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Spaca4Q80ZQ0 127 aa13.16□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Pkd1O08852 4293 aa13.12□□□□□ -0.31
Ubp1-204ENSMUST00000214095 SptssbQ925E8 76 aa13.12□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Stard9Q80TF6 4561 aa13.1□□□□□ -0.31
Ubp1-204ENSMUST00000214095 ApobE9Q414 4505 aa13.1□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Ndufb1P0DN34 57 aa13.09□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Krtap13O88375 197 aa13.07□□□□□ -0.32
Ubp1-204ENSMUST00000214095 FcgbpE9Q0B5 2583 aa13.04□□□□□ -0.32
Ubp1-204ENSMUST00000214095 Wfdc3Q14AE4 130 aa13.02□□□□□ -0.33
Ubp1-204ENSMUST00000214095 Lrp1bQ9JI18 4599 aa12.99□□□□□ -0.33
Ubp1-204ENSMUST00000214095 Limd2Q8BGB5 128 aa12.93□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Gm10999F6Q4M4 69 aa12.92□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Uqcr11Q9CPX8 56 aa12.91□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Krtap10-10A0A1W2P7T6 217 aa12.85□□□□□ -0.35
Ubp1-204ENSMUST00000214095 Gm3646F6S692 53 aa12.83□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Pkhd1E9PZ36 4059 aa12.82□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Q8BGJ3 129 aa12.81□□□□□ -0.36
Ubp1-204ENSMUST00000214095 2310034C09RikQ9D746 214 aa12.79□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Gm2696A0A1W2P709 240 aa12.78□□□□□ -0.36
Ubp1-204ENSMUST00000214095 2310079G19RikQ9D6L6 185 aa12.7□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Krtap3-2Q9D638 99 aa12.68□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Krtap3-3Q9D7P0 99 aa12.68□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Gm26620Q9CY65 116 aa12.66□□□□□ -0.38
Ubp1-204ENSMUST00000214095 9230102O04RikA2ASX7 82 aa12.65□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Defb1P56386 69 aa12.65□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Fat2Q5F226 4351 aa12.63□□□□□ -0.39
Ubp1-204ENSMUST00000214095 SacsQ9JLC8 4582 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 1700042G07RikB1AUF7 90 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 OxtP35454 125 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Fat1A0A1L1SQU7 4645 aa12.58□□□□□ -0.39
Ubp1-204ENSMUST00000214095 A930033H14RikG5E8X6 103 aa12.58□□□□□ -0.4
Ubp1-204ENSMUST00000214095 4930507D05RikQ8C9C9 103 aa12.55□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Sec61gP60060 68 aa12.54□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Ndufs5Q99LY9 106 aa12.53□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Dync1h1Q9JHU4 4644 aaKnown RBP12.53□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Gm4491E0CX42 125 aa12.48□□□□□ -0.41
Ubp1-204ENSMUST00000214095 RetnlbQ99P86 105 aa12.48□□□□□ -0.41
Ubp1-204ENSMUST00000214095 Rps29P62274 56 aa12.46□□□□□ -0.41
Ubp1-204ENSMUST00000214095 D6Ertd527eA0A0N4SWI3 464 aa12.44□□□□□ -0.42
Ubp1-204ENSMUST00000214095 Gm11939A2A592 99 aa12.39□□□□□ -0.43
Ubp1-204ENSMUST00000214095 Vps13bQ80TY5 3993 aa12.23□□□□□ -0.45
Ubp1-204ENSMUST00000214095 Ryr3A2AGL3 4863 aa12.22□□□□□ -0.45
Ubp1-204ENSMUST00000214095 Pkhd1l1Q80ZA4 4249 aa12.19□□□□□ -0.46
Ubp1-204ENSMUST00000214095 Gm9821Q8K076 103 aa12.09□□□□□ -0.47
Ubp1-204ENSMUST00000214095 Cox6b2Q80ZN9 88 aa12.07□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Lrp1Q91ZX7 4545 aaKnown RBP12.06□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Gm5767A0A0J9YTU8 78 aa12.04□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Pla2g10Q9QXX3 151 aa12.04□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Gm20537G3UYK7 97 aa11.92□□□□□ -0.5
Ubp1-204ENSMUST00000214095 Kmt2cQ8BRH4 4903 aa11.9□□□□□ -0.5
Ubp1-204ENSMUST00000214095 Krtap19-5O08632 62 aa11.87□□□□□ -0.51
Ubp1-204ENSMUST00000214095 Ryr2E9Q401 4966 aaKnown RBP11.84□□□□□ -0.51
Ubp1-204ENSMUST00000214095 Gm9736A0A1W2P7N1 277 aa11.81□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Fat3Q8BNA6 4555 aa11.79□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Gm3880A0A1B0GSB3 72 aa11.79□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Rnase13Q5GAM7 153 aa11.76□□□□□ -0.53
Ubp1-204ENSMUST00000214095 Krtap15-1Q9QZU5 150 aa11.71□□□□□ -0.53
Ubp1-204ENSMUST00000214095 Gm5965D3Z724 196 aa11.7□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Rpl37Q9D823 97 aa11.69□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm9955Q8CEJ8 102 aa11.68□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm17606F6ZL36 78 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm10382Q3V0T5 144 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Mycbp2Q7TPH6 4711 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Abca13Q5SSE9 5034 aa11.56□□□□□ -0.56
Ubp1-204ENSMUST00000214095 Dnah8Q91XQ0 4731 aa11.55□□□□□ -0.56
Ubp1-204ENSMUST00000214095 Ryr1E9PZQ0 5035 aa11.51□□□□□ -0.57
Ubp1-204ENSMUST00000214095 Gm17416Q30KP4 66 aa11.48□□□□□ -0.57
Ubp1-204ENSMUST00000214095 Krtap3-1A2A591 98 aa11.41□□□□□ -0.58
Ubp1-204ENSMUST00000214095 Gm12216A0A1W2P827 62 aa11.4□□□□□ -0.58
Ubp1-204ENSMUST00000214095 CriptO70333 101 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms