RNA–Protein interactions for RNA: ENSMUST00000214095.1

Ubp1-204, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-204ENSMUST00000214095 NischQ80TM9 1593 aa43.37■■■■■ 4.53
Ubp1-204ENSMUST00000214095 Gm35339A0A140LHH9 1649 aa42.57■■■■■ 4.4
Ubp1-204ENSMUST00000214095 Abcc9P70170 1546 aa42.14■■■■■ 4.34
Ubp1-204ENSMUST00000214095 Abcc8B2RUS7 1588 aa41.13■■■■■ 4.17
Ubp1-204ENSMUST00000214095 Rhox8Q6VSS7 320 aa40.36■■■■■ 4.05
Ubp1-204ENSMUST00000214095 Rtl1Q7M732 1744 aa40.09■■■■■ 4.01
Ubp1-204ENSMUST00000214095 Ccdc180J3QNE4 1664 aa39.38■■■■□ 3.89
Ubp1-204ENSMUST00000214095 Zcchc6Q5BLK4 1491 aaKnown RBP38.54■■■■□ 3.76
Ubp1-204ENSMUST00000214095 Dcaf1Q80TR8 1506 aa38.42■■■■□ 3.74
Ubp1-204ENSMUST00000214095 ScribQ80U72 1612 aa38.23■■■■□ 3.71
Ubp1-204ENSMUST00000214095 Rb1cc1Q9ESK9 1588 aa38.04■■■■□ 3.68
Ubp1-204ENSMUST00000214095 Baz1aO88379 1555 aa37.6■■■■□ 3.61
Ubp1-204ENSMUST00000214095 Kdm5dQ62240 1548 aa37.58■■■■□ 3.61
Ubp1-204ENSMUST00000214095 Rpgrip1Q9EPQ2 1331 aa37.49■■■■□ 3.59
Ubp1-204ENSMUST00000214095 HrcG5E8J6 738 aa37.44■■■■□ 3.58
Ubp1-204ENSMUST00000214095 Ccdc136Q3TVA9 1136 aa37.39■■■■□ 3.58
Ubp1-204ENSMUST00000214095 NacadQ5SWP3 1504 aa37.24■■■■□ 3.55
Ubp1-204ENSMUST00000214095 Acin1Q9JIX8 1338 aaKnown RBP36.89■■■■□ 3.5
Ubp1-204ENSMUST00000214095 Crybg2B7ZCC2 1516 aa36.84■■■■□ 3.49
Ubp1-204ENSMUST00000214095 Smarca2Q6DIC0 1577 aa36.77■■■■□ 3.48
Ubp1-204ENSMUST00000214095 Trim41Q5NCC3 630 aa36.66■■■■□ 3.46
Ubp1-204ENSMUST00000214095 Ehmt2Q9Z148 1263 aaKnown RBP36.63■■■■□ 3.45
Ubp1-204ENSMUST00000214095 Sycp2Q9CUU3 1500 aa36.43■■■■□ 3.42
Ubp1-204ENSMUST00000214095 Cep164Q5DU05 1446 aa36.29■■■■□ 3.4
Ubp1-204ENSMUST00000214095 Brd4Q9ESU6 1400 aaKnown RBP35.89■■■■□ 3.34
Ubp1-204ENSMUST00000214095 Cecr2E9Q2Z1 1453 aa35.79■■■■□ 3.32
Ubp1-204ENSMUST00000214095 Cngb1E1AZ71 1325 aa35.77■■■■□ 3.32
Ubp1-204ENSMUST00000214095 Rsf1E9PWW9 1441 aaKnown RBP35.74■■■■□ 3.31
Ubp1-204ENSMUST00000214095 Chic1Q8CBW7 227 aa35.67■■■■□ 3.3
Ubp1-204ENSMUST00000214095 Golga3P55937 1487 aa35.59■■■■□ 3.29
Ubp1-204ENSMUST00000214095 BicraF8VPZ9 1578 aa35.59■■■■□ 3.29
Ubp1-204ENSMUST00000214095 Synj1Q8CHC4 1574 aa35.59■■■■□ 3.29
Ubp1-204ENSMUST00000214095 Ccdc88bQ4QRL3 1481 aa35.48■■■■□ 3.27
Ubp1-204ENSMUST00000214095 Gab3Q8BSM5 595 aa35.43■■■■□ 3.26
Ubp1-204ENSMUST00000214095 Pcgf6Q99NA9 353 aa35.39■■■■□ 3.26
Ubp1-204ENSMUST00000214095 CftrP26361 1476 aa35.31■■■■□ 3.24
Ubp1-204ENSMUST00000214095 Top2bQ64511 1612 aa35.18■■■■□ 3.22
Ubp1-204ENSMUST00000214095 Esf1Q3V1V3 845 aaKnown RBP35.16■■■■□ 3.22
Ubp1-204ENSMUST00000214095 Cttnbp2B9EJA2 1648 aa35.14■■■■□ 3.22
Ubp1-204ENSMUST00000214095 Smarca4Q3TKT4 1613 aaKnown RBP34.93■■■■□ 3.18
Ubp1-204ENSMUST00000214095 Cc2d2aQ8CFW7 1633 aa34.85■■■■□ 3.17
Ubp1-204ENSMUST00000214095 Supt5hO55201 1082 aaKnown RBP34.82■■■■□ 3.17
Ubp1-204ENSMUST00000214095 Mier1Q5UAK0 511 aa34.7■■■■□ 3.15
Ubp1-204ENSMUST00000214095 NefmP08553 848 aa34.7■■■■□ 3.14
Ubp1-204ENSMUST00000214095 Fmn1Q05860 1466 aa34.62■■■■□ 3.13
Ubp1-204ENSMUST00000214095 Rapgef2Q8CHG7 1496 aa34.59■■■■□ 3.13
Ubp1-204ENSMUST00000214095 Top2aQ01320 1528 aaKnown RBP34.52■■■■□ 3.12
Ubp1-204ENSMUST00000214095 Zeb1Q64318 1117 aa34.45■■■■□ 3.11
Ubp1-204ENSMUST00000214095 Iqgap2Q3UQ44 1575 aa34.42■■■■□ 3.1
Ubp1-204ENSMUST00000214095 Cep162Q6ZQ06 1403 aa34.29■■■■□ 3.08
Ubp1-204ENSMUST00000214095 UbtfP25976 765 aaKnown RBP34.19■■■■□ 3.06
Ubp1-204ENSMUST00000214095 Atad2bE9Q166 1460 aaKnown RBP34.16■■■■□ 3.06
Ubp1-204ENSMUST00000214095 Myt1lP97500 1187 aa34.11■■■■□ 3.05
Ubp1-204ENSMUST00000214095 Npm2Q80W85 207 aa34.02■■■■□ 3.04
Ubp1-204ENSMUST00000214095 Eif4g1Q6NZJ6 1600 aaKnown RBP33.99■■■■□ 3.03
Ubp1-204ENSMUST00000214095 TnnQ80Z71 1560 aa33.98■■■■□ 3.03
Ubp1-204ENSMUST00000214095 Sall2Q9QX96 1004 aa33.97■■■■□ 3.03
Ubp1-204ENSMUST00000214095 Pds5bQ4VA53 1446 aaKnown RBP33.94■■■■□ 3.02
Ubp1-204ENSMUST00000214095 Neurod1Q60867 357 aa33.9■■■■□ 3.02
Ubp1-204ENSMUST00000214095 Clip1Q922J3 1391 aa33.82■■■■□ 3
Ubp1-204ENSMUST00000214095 Las1lA2BE28 776 aaKnown RBP33.77■■■■□ 3
Ubp1-204ENSMUST00000214095 Frmpd1A2AKB4 1549 aa33.7■■■□□ 2.99
Ubp1-204ENSMUST00000214095 Wdr62Q3U3T8 1523 aa33.68■■■□□ 2.98
Ubp1-204ENSMUST00000214095 Arhgap35Q91YM2 1499 aa33.65■■■□□ 2.98
Ubp1-204ENSMUST00000214095 Plekhg3Q4VAC9 1341 aa33.64■■■□□ 2.97
Ubp1-204ENSMUST00000214095 Lamc3Q9R0B6 1581 aa33.62■■■□□ 2.97
Ubp1-204ENSMUST00000214095 NrkQ9R0G8 1455 aa33.59■■■□□ 2.97
Ubp1-204ENSMUST00000214095 Wdr66E9Q743 1299 aa33.57■■■□□ 2.96
Ubp1-204ENSMUST00000214095 PtprkP35822 1457 aa33.57■■■□□ 2.96
Ubp1-204ENSMUST00000214095 Aebp2Q9Z248 504 aaKnown RBP33.57■■■□□ 2.96
Ubp1-204ENSMUST00000214095 Ncapd3Q6ZQK0 1506 aa33.53■■■□□ 2.96
Ubp1-204ENSMUST00000214095 Kif15Q6P9L6 1387 aa33.44■■■□□ 2.94
Ubp1-204ENSMUST00000214095 TonslQ6NZL6 1363 aa33.43■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Eea1Q8BL66 1411 aa33.43■■■□□ 2.94
Ubp1-204ENSMUST00000214095 ClspnQ80YR7 1315 aa33.42■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Shroom4Q1W617 1475 aa33.41■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Arap1Q4LDD4 1452 aa33.4■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Unc13aQ4KUS2 1712 aa33.4■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Il27Q8K3I6 234 aa33.39■■■□□ 2.94
Ubp1-204ENSMUST00000214095 Camsap1A2AHC3 1581 aa33.38■■■□□ 2.93
Ubp1-204ENSMUST00000214095 Ercc6F8VPZ5 1481 aa33.38■■■□□ 2.93
Ubp1-204ENSMUST00000214095 Map3k1P53349 1493 aa33.33■■■□□ 2.93
Ubp1-204ENSMUST00000214095 Arhgef5E9Q7D5 1581 aa33.3■■■□□ 2.92
Ubp1-204ENSMUST00000214095 Setd5Q5XJV7 1441 aa33.26■■■□□ 2.91
Ubp1-204ENSMUST00000214095 Ccdc18Q640L5 1455 aa33.24■■■□□ 2.91
Ubp1-204ENSMUST00000214095 Anks4bQ8K3X6 423 aa33.22■■■□□ 2.91
Ubp1-204ENSMUST00000214095 Ap3b1Q9Z1T1 1105 aa33.2■■■□□ 2.91
Ubp1-204ENSMUST00000214095 Grin2bQ01097 1482 aa33.18■■■□□ 2.9
Ubp1-204ENSMUST00000214095 Mroh2bQ7M6Y6 1581 aa33.1■■■□□ 2.89
Ubp1-204ENSMUST00000214095 Tiam1Q60610 1591 aa33.1■■■□□ 2.89
Ubp1-204ENSMUST00000214095 Ppargc1bQ8VHJ7 1014 aa33.07■■■□□ 2.88
Ubp1-204ENSMUST00000214095 Kdm5bQ80Y84 1544 aa33.07■■■□□ 2.88
Ubp1-204ENSMUST00000214095 Cdk11bP24788 784 aaKnown RBP33.06■■■□□ 2.88
Ubp1-204ENSMUST00000214095 Nop58Q6DFW4 536 aaKnown RBP33.06■■■□□ 2.88
Ubp1-204ENSMUST00000214095 Erich3F6QRE9 1637 aa33.05■■■□□ 2.88
Ubp1-204ENSMUST00000214095 Baz1bQ9Z277 1479 aa33■■■□□ 2.87
Ubp1-204ENSMUST00000214095 Ankrd26Q811D2 1581 aa33■■■□□ 2.87
Ubp1-204ENSMUST00000214095 AqrQ8CFQ3 1481 aaKnown RBP32.96■■■□□ 2.87
Ubp1-204ENSMUST00000214095 Naip1Q9QWK5 1403 aa32.94■■■□□ 2.86
Ubp1-204ENSMUST00000214095 TchhA0A0B4J1F9 1599 aa32.93■■■□□ 2.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms