RNA–Protein interactions for RNA: ENSMUST00000111980.3

Hoxd4-202, Transcript of Homeobox protein Hox-D4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd4, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4-202ENSMUST00000111980 Atp5eP56382 52 aa11.03□□□□□ -0.64
Hoxd4-202ENSMUST00000111980 Ormdl1Q921I0 153 aa11.03□□□□□ -0.64
Hoxd4-202ENSMUST00000111980 Chchd10Q7TNL9 138 aa11.02□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 Rbm3O89086 153 aaKnown RBP11□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 Sfta2E9PXB6 77 aa11□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 Cox6a2P43023 97 aa11□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 4930535I16RikQ9CUI2 172 aa11□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 Anapc13Q8R034 74 aa10.96□□□□□ -0.65
Hoxd4-202ENSMUST00000111980 Igkv8-21A0A140T8P7 120 aa10.93□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Gm10308Q9CVR5 141 aa10.93□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Ubl5Q9EPV8 73 aa10.93□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Tmem254aP0DN89 123 aa10.9□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Tmem254bP0DN90 123 aa10.9□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Tmem254cP0DN91 123 aa10.9□□□□□ -0.66
Hoxd4-202ENSMUST00000111980 Sprr2jO70561 109 aa10.89□□□□□ -0.67
Hoxd4-202ENSMUST00000111980 Gm11939A2A592 99 aa10.88□□□□□ -0.67
Hoxd4-202ENSMUST00000111980 Igkv8-28A0A0G2JE47 121 aa10.87□□□□□ -0.67
Hoxd4-202ENSMUST00000111980 Gm12353A2AGJ4 60 aa10.87□□□□□ -0.67
Hoxd4-202ENSMUST00000111980 Gm9821Q8K076 103 aa10.87□□□□□ -0.67
Hoxd4-202ENSMUST00000111980 2310057N15RikQ9D6T8 200 aa10.8□□□□□ -0.68
Hoxd4-202ENSMUST00000111980 Krtap15-1Q9QZU5 150 aa10.8□□□□□ -0.68
Hoxd4-202ENSMUST00000111980 Krtap1-3A2A588 173 aa10.79□□□□□ -0.68
Hoxd4-202ENSMUST00000111980 MplkipQ9D011 178 aa10.77□□□□□ -0.69
Hoxd4-202ENSMUST00000111980 ZanO88799 5376 aa10.74□□□□□ -0.69
Hoxd4-202ENSMUST00000111980 Hist1h4aP62806 103 aaKnown RBP10.73□□□□□ -0.69
Hoxd4-202ENSMUST00000111980 Cypt15B1AXS0 87 aa10.69□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Sec61bQ9CQS8 96 aaKnown RBP10.69□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Gm44790A0A0N4SV91 103 aa10.68□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Gm37013Q8K491 104 aa10.68□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Crct1Q6PAI5 102 aa10.68□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Mrpl34Q99N91 92 aa10.65□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Gm26620Q9CY65 116 aa10.65□□□□□ -0.7
Hoxd4-202ENSMUST00000111980 Ndufc1Q9CQY9 76 aa10.64□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 Fat4Q2PZL6 4981 aa10.62□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 C130032M10RikQ8C888 123 aa10.61□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 UqcrqQ9CQ69 82 aa10.61□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 Gm20604F8WIA3 75 aa10.6□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 Defa21Q8C1P2 93 aa10.6□□□□□ -0.71
Hoxd4-202ENSMUST00000111980 Rpl37Q9D823 97 aa10.58□□□□□ -0.72
Hoxd4-202ENSMUST00000111980 2310034C09RikQ9D746 214 aa10.55□□□□□ -0.72
Hoxd4-202ENSMUST00000111980 7530416G11RikJ3QJX6 159 aa10.54□□□□□ -0.72
Hoxd4-202ENSMUST00000111980 Serp2Q6TAW2 65 aa10.54□□□□□ -0.72
Hoxd4-202ENSMUST00000111980 Igkv3-3A0A140T8Q0 119 aa10.51□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 LorP18165 486 aa10.5□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 Prr13Q9CQJ5 137 aa10.5□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 4930518I15RikQ3V2W7 57 aa10.49□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 Igkv8-19A0A0G2JFN8 121 aa10.48□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 Reg3aO09037 175 aa10.47□□□□□ -0.73
Hoxd4-202ENSMUST00000111980 Apoc4Q61268 124 aa10.46□□□□□ -0.74
Hoxd4-202ENSMUST00000111980 Prr15lQ8JZM2 100 aa10.46□□□□□ -0.74
Hoxd4-202ENSMUST00000111980 Fam229bQ8CF36 80 aa10.44□□□□□ -0.74
Hoxd4-202ENSMUST00000111980 Rnf213E9Q555 5152 aaKnown RBP10.44□□□□□ -0.74
Hoxd4-202ENSMUST00000111980 Naa38Q9D2U5 125 aa10.42□□□□□ -0.74
Hoxd4-202ENSMUST00000111980 Krtap16-3Q8C1I6 86 aa10.36□□□□□ -0.75
Hoxd4-202ENSMUST00000111980 Gm28539A0A087WSL9 92 aa10.36□□□□□ -0.75
Hoxd4-202ENSMUST00000111980 Krtap19-1Q925H2 87 aa10.34□□□□□ -0.75
Hoxd4-202ENSMUST00000111980 Krtap19-3Q925H6 87 aa10.34□□□□□ -0.75
Hoxd4-202ENSMUST00000111980 Samd13D3YUG0 102 aa10.32□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 B230307C23RikQ8BLB2 64 aa10.31□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 BikO70337 150 aa10.3□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Spink8Q09TK9 105 aa10.3□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Gm10267M0QWD8 85 aa10.3□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Gm10318A0A1W2P728 225 aa10.29□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 A0A286YE49 62 aa10.28□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Gm19402J3QJV4 266 aa10.28□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Pcp4P63054 62 aa10.28□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Defb13Q8R2I4 64 aa10.28□□□□□ -0.76
Hoxd4-202ENSMUST00000111980 Scgb1b2O35176 93 aa10.27□□□□□ -0.77
Hoxd4-202ENSMUST00000111980 Rnase13Q5GAM7 153 aa10.23□□□□□ -0.77
Hoxd4-202ENSMUST00000111980 Tmem258P61166 79 aa10.22□□□□□ -0.77
Hoxd4-202ENSMUST00000111980 SmcpP15265 143 aa10.19□□□□□ -0.78
Hoxd4-202ENSMUST00000111980 1700042G07RikB1AUF7 90 aa10.18□□□□□ -0.78
Hoxd4-202ENSMUST00000111980 Gm10061D3Z714 54 aa10.17□□□□□ -0.78
Hoxd4-202ENSMUST00000111980 Gm19935A0A1B0GSF9 52 aa10.17□□□□□ -0.78
Hoxd4-202ENSMUST00000111980 Smlr1J3QMJ4 66 aa10.16□□□□□ -0.78
Hoxd4-202ENSMUST00000111980 Krtap3-2Q9D638 99 aa10.14□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Krtap3-3Q9D7P0 99 aa10.14□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Coa6Q8BGD8 79 aa10.11□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Krtap1-4Q3V2D6 188 aa10.1□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Atox1O08997 68 aaKnown RBP10.1□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Fam229aB2KGE5 128 aa10.09□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Smim20D3Z7Q2 69 aa10.09□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 1700074P13RikQ9D9G7 251 aa10.09□□□□□ -0.79
Hoxd4-202ENSMUST00000111980 Spint4Q9D263 159 aa10.06□□□□□ -0.8
Hoxd4-202ENSMUST00000111980 SspoQ8CG65 4998 aa10.01□□□□□ -0.81
Hoxd4-202ENSMUST00000111980 Pet100P0DJE0 76 aa10.01□□□□□ -0.81
Hoxd4-202ENSMUST00000111980 Rps28P62858 69 aaKnown RBP10□□□□□ -0.81
Hoxd4-202ENSMUST00000111980 Krtap4-1Q3UUY3 169 aa9.98□□□□□ -0.81
Hoxd4-202ENSMUST00000111980 Gm17416Q30KP4 66 aa9.96□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 Gm11569B1AQB1 180 aa9.95□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 Gm4491E0CX42 125 aa9.94□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 Gm11562A0PK51 136 aa9.91□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 SnurfQ9WU12 71 aa9.91□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 Serp1Q9Z1W5 66 aa9.91□□□□□ -0.82
Hoxd4-202ENSMUST00000111980 Coa5Q99M07 74 aa9.86□□□□□ -0.83
Hoxd4-202ENSMUST00000111980 Chtf8P0CG14 533 aa9.85□□□□□ -0.83
Hoxd4-202ENSMUST00000111980 Gm10160F6Y577 67 aa9.8□□□□□ -0.84
Hoxd4-202ENSMUST00000111980 Brk1Q91VR8 75 aa9.8□□□□□ -0.84
Hoxd4-202ENSMUST00000111980 Krtap17-1A2A5X6 109 aa9.79□□□□□ -0.84
Hoxd4-202ENSMUST00000111980 Krtap13-1Q8K198 168 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms