RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm2310J3QNJ2 377 aa11.25□□□□□ -0.61
Trim47-202ENSMUST00000106441 Rpl37aP61514 92 aa11.25□□□□□ -0.61
Trim47-202ENSMUST00000106441 1700012A03RikQ9DAF1 130 aa11.24□□□□□ -0.61
Trim47-202ENSMUST00000106441 Dnah2P0C6F1 4456 aa11.23□□□□□ -0.61
Trim47-202ENSMUST00000106441 Chtf8P0CG14 533 aa11.21□□□□□ -0.61
Trim47-202ENSMUST00000106441 Igkv3-5A0A140T8M6 119 aa11.2□□□□□ -0.62
Trim47-202ENSMUST00000106441 Pkd1O08852 4293 aa11.19□□□□□ -0.62
Trim47-202ENSMUST00000106441 Gm27235Q3UW50 83 aa11.18□□□□□ -0.62
Trim47-202ENSMUST00000106441 Ryr2E9Q401 4966 aaKnown RBP11.18□□□□□ -0.62
Trim47-202ENSMUST00000106441 Gm10643Q3URG9 111 aa11.18□□□□□ -0.62
Trim47-202ENSMUST00000106441 Defb9Q8R2I6 67 aa11.16□□□□□ -0.62
Trim47-202ENSMUST00000106441 Gm2696A0A1W2P709 240 aa11.15□□□□□ -0.62
Trim47-202ENSMUST00000106441 6030445D17RikE9Q8F9 148 aa11.13□□□□□ -0.63
Trim47-202ENSMUST00000106441 Gm10160F6Y577 67 aa11.1□□□□□ -0.63
Trim47-202ENSMUST00000106441 Gm10065F6TJM2 114 aa11.09□□□□□ -0.63
Trim47-202ENSMUST00000106441 Dnah5Q8VHE6 4621 aa11.06□□□□□ -0.64
Trim47-202ENSMUST00000106441 Gm10267M0QWD8 85 aa11.05□□□□□ -0.64
Trim47-202ENSMUST00000106441 Stard9Q80TF6 4561 aa11.04□□□□□ -0.64
Trim47-202ENSMUST00000106441 Dync1h1Q9JHU4 4644 aaKnown RBP11.03□□□□□ -0.64
Trim47-202ENSMUST00000106441 Krtap13O88375 197 aa11.03□□□□□ -0.64
Trim47-202ENSMUST00000106441 Gm10642Q3TWM1 71 aa11.03□□□□□ -0.64
Trim47-202ENSMUST00000106441 1600014C23RikQ9DAX4 101 aa11.03□□□□□ -0.64
Trim47-202ENSMUST00000106441 Krtap29-1A2A5X4 342 aa11.02□□□□□ -0.65
Trim47-202ENSMUST00000106441 Gm26620Q9CY65 116 aa11.01□□□□□ -0.65
Trim47-202ENSMUST00000106441 Ndufb1P0DN34 57 aa11.01□□□□□ -0.65
Trim47-202ENSMUST00000106441 HrnrQ8VHD8 2496 aa11.01□□□□□ -0.65
Trim47-202ENSMUST00000106441 Igkv3-3A0A140T8Q0 119 aa11□□□□□ -0.65
Trim47-202ENSMUST00000106441 1700042G07RikB1AUF7 90 aa11□□□□□ -0.65
Trim47-202ENSMUST00000106441 Znf706Q9D115 76 aaKnown RBP11□□□□□ -0.65
Trim47-202ENSMUST00000106441 Gm20661K7N787 53 aa10.99□□□□□ -0.65
Trim47-202ENSMUST00000106441 SptssbQ925E8 76 aa10.97□□□□□ -0.65
Trim47-202ENSMUST00000106441 Cypt14J3QPF7 87 aa10.96□□□□□ -0.65
Trim47-202ENSMUST00000106441 Gm3646F6S692 53 aa10.94□□□□□ -0.66
Trim47-202ENSMUST00000106441 Fat1A0A1L1SQU7 4645 aa10.94□□□□□ -0.66
Trim47-202ENSMUST00000106441 Gpr15lA0A0B4J1N3 78 aa10.93□□□□□ -0.66
Trim47-202ENSMUST00000106441 9230102O04RikA2ASX7 82 aa10.92□□□□□ -0.66
Trim47-202ENSMUST00000106441 NbdyA0A0N4SUI7 68 aa10.9□□□□□ -0.66
Trim47-202ENSMUST00000106441 Gm16253D3Z167 63 aa10.9□□□□□ -0.66
Trim47-202ENSMUST00000106441 Ryr1E9PZQ0 5035 aa10.9□□□□□ -0.66
Trim47-202ENSMUST00000106441 Pkhd1E9PZ36 4059 aa10.9□□□□□ -0.66
Trim47-202ENSMUST00000106441 Ccdc179J3QM76 67 aa10.9□□□□□ -0.66
Trim47-202ENSMUST00000106441 Limd2Q8BGB5 128 aa10.86□□□□□ -0.67
Trim47-202ENSMUST00000106441 Adm2Q7TNK8 150 aa10.84□□□□□ -0.67
Trim47-202ENSMUST00000106441 Defb39Q70KL3 74 aa10.83□□□□□ -0.68
Trim47-202ENSMUST00000106441 ApobE9Q414 4505 aa10.83□□□□□ -0.68
Trim47-202ENSMUST00000106441 SacsQ9JLC8 4582 aa10.82□□□□□ -0.68
Trim47-202ENSMUST00000106441 Defb38Q7TNV7 63 aa10.81□□□□□ -0.68
Trim47-202ENSMUST00000106441 Uqcr11Q9CPX8 56 aa10.79□□□□□ -0.68
Trim47-202ENSMUST00000106441 Tnp2P11378 117 aa10.76□□□□□ -0.69
Trim47-202ENSMUST00000106441 Anapc11Q9CPX9 84 aa10.76□□□□□ -0.69
Trim47-202ENSMUST00000106441 Krtap14O08640 167 aa10.72□□□□□ -0.69
Trim47-202ENSMUST00000106441 Gm21798J3QNU5 87 aa10.68□□□□□ -0.7
Trim47-202ENSMUST00000106441 Defb13Q8R2I4 64 aa10.67□□□□□ -0.7
Trim47-202ENSMUST00000106441 Cypt15B1AXS0 87 aa10.63□□□□□ -0.71
Trim47-202ENSMUST00000106441 Kmt2cQ8BRH4 4903 aa10.6□□□□□ -0.71
Trim47-202ENSMUST00000106441 Hectd4E9Q2E4 4418 aa10.58□□□□□ -0.72
Trim47-202ENSMUST00000106441 RetnlbQ99P86 105 aa10.58□□□□□ -0.72
Trim47-202ENSMUST00000106441 Dnah8Q91XQ0 4731 aa10.56□□□□□ -0.72
Trim47-202ENSMUST00000106441 Vps13bQ80TY5 3993 aa10.56□□□□□ -0.72
Trim47-202ENSMUST00000106441 Lrp1bQ9JI18 4599 aa10.55□□□□□ -0.72
Trim47-202ENSMUST00000106441 Pkhd1l1Q80ZA4 4249 aa10.54□□□□□ -0.72
Trim47-202ENSMUST00000106441 Ndufs5Q99LY9 106 aa10.53□□□□□ -0.72
Trim47-202ENSMUST00000106441 Spaca4Q80ZQ0 127 aa10.49□□□□□ -0.73
Trim47-202ENSMUST00000106441 Fat2Q5F226 4351 aa10.45□□□□□ -0.74
Trim47-202ENSMUST00000106441 Gm9821Q8K076 103 aa10.44□□□□□ -0.74
Trim47-202ENSMUST00000106441 Krtap19-5O08632 62 aa10.42□□□□□ -0.74
Trim47-202ENSMUST00000106441 Gm10999F6Q4M4 69 aa10.42□□□□□ -0.74
Trim47-202ENSMUST00000106441 Herc2Q4U2R1 4836 aa10.39□□□□□ -0.75
Trim47-202ENSMUST00000106441 Q8BGJ3 129 aa10.36□□□□□ -0.75
Trim47-202ENSMUST00000106441 2310034C09RikQ9D746 214 aa10.35□□□□□ -0.75
Trim47-202ENSMUST00000106441 Birc6O88738 4882 aa10.34□□□□□ -0.75
Trim47-202ENSMUST00000106441 Abca13Q5SSE9 5034 aa10.32□□□□□ -0.76
Trim47-202ENSMUST00000106441 Fat3Q8BNA6 4555 aa10.31□□□□□ -0.76
Trim47-202ENSMUST00000106441 Pla2g10Q9QXX3 151 aa10.3□□□□□ -0.76
Trim47-202ENSMUST00000106441 2310079G19RikQ9D6L6 185 aa10.29□□□□□ -0.76
Trim47-202ENSMUST00000106441 Kiaa1109A2AAE1 5005 aa10.27□□□□□ -0.77
Trim47-202ENSMUST00000106441 Lrp1Q91ZX7 4545 aaKnown RBP10.26□□□□□ -0.77
Trim47-202ENSMUST00000106441 Dnhd1D3Z2X2 4750 aa10.23□□□□□ -0.77
Trim47-202ENSMUST00000106441 A930033H14RikG5E8X6 103 aa10.22□□□□□ -0.77
Trim47-202ENSMUST00000106441 Krtap3-2Q9D638 99 aa10.22□□□□□ -0.77
Trim47-202ENSMUST00000106441 Krtap3-3Q9D7P0 99 aa10.22□□□□□ -0.77
Trim47-202ENSMUST00000106441 4930507D05RikQ8C9C9 103 aa10.21□□□□□ -0.78
Trim47-202ENSMUST00000106441 Defb1P56386 69 aa10.15□□□□□ -0.79
Trim47-202ENSMUST00000106441 D6Ertd527eA0A0N4SWI3 464 aa10.14□□□□□ -0.79
Trim47-202ENSMUST00000106441 Rps29P62274 56 aa10.09□□□□□ -0.79
Trim47-202ENSMUST00000106441 HydinQ80W93 5154 aa10.08□□□□□ -0.8
Trim47-202ENSMUST00000106441 Gm4491E0CX42 125 aa10.04□□□□□ -0.8
Trim47-202ENSMUST00000106441 Gm12216A0A1W2P827 62 aa10.03□□□□□ -0.8
Trim47-202ENSMUST00000106441 PcloQ9QYX7 5068 aa10.02□□□□□ -0.81
Trim47-202ENSMUST00000106441 Gm9736A0A1W2P7N1 277 aa9.98□□□□□ -0.81
Trim47-202ENSMUST00000106441 Lce1mQ9CR91 182 aa9.97□□□□□ -0.81
Trim47-202ENSMUST00000106441 Mycbp2Q7TPH6 4711 aa9.94□□□□□ -0.82
Trim47-202ENSMUST00000106441 Gm11939A2A592 99 aa9.91□□□□□ -0.82
Trim47-202ENSMUST00000106441 Gm20537G3UYK7 97 aa9.81□□□□□ -0.84
Trim47-202ENSMUST00000106441 Cox6b2Q80ZN9 88 aa9.8□□□□□ -0.84
Trim47-202ENSMUST00000106441 Lrp2A2ARV4 4660 aa9.76□□□□□ -0.85
Trim47-202ENSMUST00000106441 Gm3880A0A1B0GSB3 72 aa9.72□□□□□ -0.85
Trim47-202ENSMUST00000106441 Herc1E9PZP8 4859 aa9.7□□□□□ -0.86
Trim47-202ENSMUST00000106441 Gm5965D3Z724 196 aa9.7□□□□□ -0.86
Trim47-202ENSMUST00000106441 Gm5767A0A0J9YTU8 78 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms