RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gm35549A0A0N4SUS7 141 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Krtap14O08640 167 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 BtcQ05928 177 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Cops9Q3U898 57 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Defb50Q6TU36 73 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 PcloQ9QYX7 5068 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Brd3osA0A1B0GRB6 84 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Lect2O88803 151 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 P01755 137 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Rpl28P41105 137 aaKnown RBP3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Fam168bQ80XQ8 194 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Tomm6Q9CQN3 74 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Timm17bQ9Z0V7 172 aa3.76□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Defa20Q45VN2 95 aa3.75□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Wfdc12Q9JHY3 85 aa3.75□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Gm20730A0A075B5J6 119 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Gm11596B1AQB0 205 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Ube2d4D3YUH6 135 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 1500009C09RikD3YYW9 81 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Prol1E9PYQ4 312 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Lce3dE9Q8V1 98 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Tcl1b3P56842 122 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Lce3aQ497I5 98 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Ly6hQ9WUC3 139 aa3.74□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Gm28269A0A087WSG3 125 aa3.73□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Fam229bQ8CF36 80 aa3.73□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Cox6cQ9CPQ1 76 aa3.73□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Trav9d-4A0A0G2JG37 103 aa3.72□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 6030445D17RikE9Q8F9 148 aa3.72□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 MifP34884 115 aaKnown RBP3.72□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 SrarpQ3ULG3 163 aa3.72□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 Fat3Q8BNA6 4555 aa3.71□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 HydinQ80W93 5154 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Fam240aJ3QNP9 97 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Defa7P50705 93 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 4930432M17RikQ3V0W9 174 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Krtap19-3Q925H6 87 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Reg3dQ9QUS9 175 aa3.71□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Fat2Q5F226 4351 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Iglc1A0A0G2JE99 106 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 D6Ertd527eA0A0N4SWI3 464 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Cox8bP48772 70 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Gm7276Q3TYW4 209 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Mustn1Q99JI1 82 aa3.7□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 P01837 106 aa3.69□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Lrp1bQ9JI18 4599 aa3.69□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Romo1P60603 79 aa3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Gm10642Q3TWM1 71 aa3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Try10Q792Z1 246 aaKnown RBP3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 4930442H23RikQ9D5G7 103 aa3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Hectd4E9Q2E4 4418 aa3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Lrp1Q91ZX7 4545 aaKnown RBP3.68□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Trav4-3A0A0B4J1K1 110 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 1700011M02RikB1AX35 88 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Gm42674D3YUT9 64 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Gm10135F6TEE5 83 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Pmp2P24526 132 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Brk1Q91VR8 75 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Serp1Q9Z1W5 66 aa3.67□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 2310034G01RikA0A286YDL3 209 aa3.66□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Dmac1Q9CQ00 111 aa3.66□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 4933415A04RikQ9D443 101 aa3.66□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Mycbp2Q7TPH6 4711 aa3.66□□□□□ -1.82
Ccdc54-201ENSMUST00000062439 Igkv8-21A0A140T8P7 120 aa3.65□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm20458E9PXJ7 78 aa3.65□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Cox7bP56393 80 aa3.65□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Smim29Q8R043 75 aa3.65□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm29289A0A087WPY7 166 aa3.64□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm10845Q3UNY9 185 aa3.64□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm27235Q3UW50 83 aa3.64□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Defb39Q70KL3 74 aa3.64□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Plac1Q9JI83 173 aa3.64□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Sostdc1Q9CQN4 206 aa3.63□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm10308Q9CVR5 141 aa3.63□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Trav4n-4A0A075B615 110 aa3.62□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Igkv8-18A0A0B4J1J3 123 aa3.62□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm10577Q3UDV9 132 aa3.62□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Crct1Q6PAI5 102 aa3.62□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 4930415O20RikQ8CDT5 131 aa3.62□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 C920008G01RikA0A0B4J1N1 112 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm44965A0A0N4SVR3 59 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Hbb-bsA8DUK4 147 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Vamp8O70404 101 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Hbb-b1P02088 147 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Hist2h2beQ64524 126 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Defa22Q8C1N8 93 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm10295Q8CCF3 114 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Defb12Q8K4N3 78 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Spint4Q9D263 159 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Herc1E9PZP8 4859 aa3.61□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Trav4d-3A0A075B625 110 aa3.6□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Gm5153P01627 120 aa3.6□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 HrnrQ8VHD8 2496 aa3.59□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Prm1P02319 51 aa3.59□□□□□ -1.83
Ccdc54-201ENSMUST00000062439 Igkv1-35A0A0G2JDE5 120 aa3.58□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Glrp1E9Q9S8 174 aa3.58□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm9805F6YK59 57 aa3.58□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Lrp2A2ARV4 4660 aa3.58□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm28230A0A0A0MQ91 144 aa3.57□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Igkv3-5A0A140T8M6 119 aa3.56□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 54.6 ms