Protein–RNA interactions for Protein: A0A0N4SUS7

Gm35549, Predicted gene, 35549, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35549A0A0N4SUS7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Gm35549A0A0N4SUS7 Gm25239-201ENSMUST00000174915 86 ntBASIC22.95■■□□□ 1.26
Gm35549A0A0N4SUS7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Gm35549A0A0N4SUS7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm35549A0A0N4SUS7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm35549A0A0N4SUS7 Psd-208ENSMUST00000224556 2034 ntBASIC22.41■■□□□ 1.18
Gm35549A0A0N4SUS7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm35549A0A0N4SUS7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm35549A0A0N4SUS7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm35549A0A0N4SUS7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm35549A0A0N4SUS7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm35549A0A0N4SUS7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm35549A0A0N4SUS7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm35549A0A0N4SUS7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Gm35549A0A0N4SUS7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm35549A0A0N4SUS7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm35549A0A0N4SUS7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm35549A0A0N4SUS7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gm35549A0A0N4SUS7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm35549A0A0N4SUS7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm35549A0A0N4SUS7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm35549A0A0N4SUS7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm35549A0A0N4SUS7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm35549A0A0N4SUS7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.58■□□□□ 0.89
Gm35549A0A0N4SUS7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm35549A0A0N4SUS7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm35549A0A0N4SUS7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm35549A0A0N4SUS7 Gm15042-201ENSMUST00000120212 883 ntBASIC20.54■□□□□ 0.88
Gm35549A0A0N4SUS7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm35549A0A0N4SUS7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm35549A0A0N4SUS7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm35549A0A0N4SUS7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.36■□□□□ 0.85
Gm35549A0A0N4SUS7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm35549A0A0N4SUS7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm35549A0A0N4SUS7 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.3■□□□□ 0.84
Gm35549A0A0N4SUS7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm35549A0A0N4SUS7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm35549A0A0N4SUS7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm35549A0A0N4SUS7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm35549A0A0N4SUS7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm35549A0A0N4SUS7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm35549A0A0N4SUS7 Gm15045-201ENSMUST00000117359 883 ntBASIC20.14■□□□□ 0.81
Gm35549A0A0N4SUS7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm35549A0A0N4SUS7 Gm10524-201ENSMUST00000181931 1893 ntBASIC20■□□□□ 0.79
Gm35549A0A0N4SUS7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm35549A0A0N4SUS7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm35549A0A0N4SUS7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm35549A0A0N4SUS7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm35549A0A0N4SUS7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.89■□□□□ 0.77
Gm35549A0A0N4SUS7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm35549A0A0N4SUS7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm35549A0A0N4SUS7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm35549A0A0N4SUS7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm35549A0A0N4SUS7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.8■□□□□ 0.76
Gm35549A0A0N4SUS7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm35549A0A0N4SUS7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm35549A0A0N4SUS7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm35549A0A0N4SUS7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm35549A0A0N4SUS7 Gm24109-201ENSMUST00000175489 103 ntBASIC19.65■□□□□ 0.74
Gm35549A0A0N4SUS7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm35549A0A0N4SUS7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm35549A0A0N4SUS7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm35549A0A0N4SUS7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm35549A0A0N4SUS7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gm35549A0A0N4SUS7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm35549A0A0N4SUS7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm35549A0A0N4SUS7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm35549A0A0N4SUS7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm35549A0A0N4SUS7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm35549A0A0N4SUS7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm35549A0A0N4SUS7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm35549A0A0N4SUS7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm35549A0A0N4SUS7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm35549A0A0N4SUS7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm35549A0A0N4SUS7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm35549A0A0N4SUS7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm35549A0A0N4SUS7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm35549A0A0N4SUS7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm35549A0A0N4SUS7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm35549A0A0N4SUS7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm35549A0A0N4SUS7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm35549A0A0N4SUS7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm35549A0A0N4SUS7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm35549A0A0N4SUS7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm35549A0A0N4SUS7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm35549A0A0N4SUS7 Gm23366-201ENSMUST00000175022 89 ntBASIC19.27■□□□□ 0.68
Gm35549A0A0N4SUS7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gm35549A0A0N4SUS7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm35549A0A0N4SUS7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm35549A0A0N4SUS7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.25■□□□□ 0.67
Gm35549A0A0N4SUS7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm35549A0A0N4SUS7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm35549A0A0N4SUS7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm35549A0A0N4SUS7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm35549A0A0N4SUS7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm35549A0A0N4SUS7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm35549A0A0N4SUS7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm35549A0A0N4SUS7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm35549A0A0N4SUS7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm35549A0A0N4SUS7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms