RNA–Protein interactions for RNA: ENSMUST00000102754.10

Pkp4-202, Transcript of Plakophilin-4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pkp4, Length 4,614 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-202ENSMUST00000102754 AY074887Q8R5F9 132 aa11.58□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Gm10308Q9CVR5 141 aa11.58□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Prol1E9PYQ4 312 aa11.58□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Spaca4Q80ZQ0 127 aa11.58□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Gpr15lA0A0B4J1N3 78 aa11.56□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Gm5617Q91VN2 117 aa11.56□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Gm10999F6Q4M4 69 aa11.55□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Spata3Q9D9T6 193 aa11.54□□□□□ -0.56
Pkp4-202ENSMUST00000102754 AplnQ9R0R4 77 aa11.54□□□□□ -0.56
Pkp4-202ENSMUST00000102754 NbeaQ9EPN1 2936 aa11.54□□□□□ -0.56
Pkp4-202ENSMUST00000102754 RelnQ60841 3461 aa11.53□□□□□ -0.56
Pkp4-202ENSMUST00000102754 Rps28P62858 69 aaKnown RBP11.52□□□□□ -0.56
Pkp4-202ENSMUST00000102754 DspE9Q557 2883 aaKnown RBP11.5□□□□□ -0.57
Pkp4-202ENSMUST00000102754 1810062G17RikG3X8Y2 129 aa11.5□□□□□ -0.57
Pkp4-202ENSMUST00000102754 A930002H24RikQ8C8Y3 163 aa11.48□□□□□ -0.57
Pkp4-202ENSMUST00000102754 C530025M09RikF6RGA8 229 aa11.47□□□□□ -0.57
Pkp4-202ENSMUST00000102754 Sprr1bQ62267 153 aa11.47□□□□□ -0.57
Pkp4-202ENSMUST00000102754 Hivep1Q03172 2688 aa11.46□□□□□ -0.57
Pkp4-202ENSMUST00000102754 Zzef1Q5SSH7 2924 aa11.45□□□□□ -0.58
Pkp4-202ENSMUST00000102754 Gm27235Q3UW50 83 aa11.45□□□□□ -0.58
Pkp4-202ENSMUST00000102754 A330070K13RikQ8CA53 115 aa11.43□□□□□ -0.58
Pkp4-202ENSMUST00000102754 RetnlbQ99P86 105 aa11.41□□□□□ -0.58
Pkp4-202ENSMUST00000102754 Gm17606F6ZL36 78 aa11.38□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Defb1P56386 69 aa11.38□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Gm7138L7N2C3 230 aa11.36□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Gm3238W4VSP7 230 aa11.36□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Q8BGJ3 129 aa11.35□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Coa5Q99M07 74 aa11.35□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Gm20661K7N787 53 aa11.35□□□□□ -0.59
Pkp4-202ENSMUST00000102754 Cdc42se1Q8BHL7 80 aa11.33□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Limd2Q8BGB5 128 aa11.32□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Gm7137J3QMW1 236 aa11.32□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Plac8Q9JI48 112 aa11.31□□□□□ -0.6
Pkp4-202ENSMUST00000102754 FlncQ8VHX6 2726 aaKnown RBP11.3□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Anapc11Q9CPX9 84 aa11.3□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Trank1Q8BV79 2999 aa11.29□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Igfn1Q3KNY0 2849 aa11.28□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Defb9Q8R2I6 67 aa11.28□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Utp20Q5XG71 2788 aaKnown RBP11.28□□□□□ -0.6
Pkp4-202ENSMUST00000102754 4930507D05RikQ8C9C9 103 aa11.28□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Gm7276Q3TYW4 209 aa11.27□□□□□ -0.6
Pkp4-202ENSMUST00000102754 Akap9Q70FJ1 3797 aa11.25□□□□□ -0.61
Pkp4-202ENSMUST00000102754 Fam229bQ8CF36 80 aa11.25□□□□□ -0.61
Pkp4-202ENSMUST00000102754 Smim29Q8R043 75 aa11.23□□□□□ -0.61
Pkp4-202ENSMUST00000102754 Gm11565A2A4M7 156 aa11.22□□□□□ -0.61
Pkp4-202ENSMUST00000102754 Gm12216A0A1W2P827 62 aa11.2□□□□□ -0.62
Pkp4-202ENSMUST00000102754 Cypt15B1AXS0 87 aa11.19□□□□□ -0.62
Pkp4-202ENSMUST00000102754 Phxr4P15974 95 aa11.17□□□□□ -0.62
Pkp4-202ENSMUST00000102754 CnbpP53996 178 aaKnown RBP11.17□□□□□ -0.62
Pkp4-202ENSMUST00000102754 Gm11213A0A1B0GR83 88 aa11.16□□□□□ -0.62
Pkp4-202ENSMUST00000102754 Vps13cQ8BX70 3748 aa11.15□□□□□ -0.62
Pkp4-202ENSMUST00000102754 Chtf8P0CG14 533 aa11.13□□□□□ -0.63
Pkp4-202ENSMUST00000102754 Chd9Q8BYH8 2885 aa11.13□□□□□ -0.63
Pkp4-202ENSMUST00000102754 Gm10320E9PW43 113 aa11.11□□□□□ -0.63
Pkp4-202ENSMUST00000102754 Phxr5P08399 672 aa11.11□□□□□ -0.63
Pkp4-202ENSMUST00000102754 SpenQ62504 3644 aaKnown RBP11.09□□□□□ -0.63
Pkp4-202ENSMUST00000102754 Celsr2Q9R0M0 2920 aa11.08□□□□□ -0.64
Pkp4-202ENSMUST00000102754 Fam104aA2A6P4 185 aa11.08□□□□□ -0.64
Pkp4-202ENSMUST00000102754 AW011738F6S7Q2 159 aa11.08□□□□□ -0.64
Pkp4-202ENSMUST00000102754 Zcchc13Q9D548 170 aa11.05□□□□□ -0.64
Pkp4-202ENSMUST00000102754 Nf1Q04690 2841 aa11.02□□□□□ -0.65
Pkp4-202ENSMUST00000102754 Zfhx4Q9JJN2 3550 aa10.96□□□□□ -0.65
Pkp4-202ENSMUST00000102754 Cystm1Q8K353 104 aa10.96□□□□□ -0.66
Pkp4-202ENSMUST00000102754 Uqcr11Q9CPX8 56 aa10.96□□□□□ -0.66
Pkp4-202ENSMUST00000102754 Csmd1Q923L3 3564 aa10.94□□□□□ -0.66
Pkp4-202ENSMUST00000102754 Itpr2Q9Z329 2701 aa10.92□□□□□ -0.66
Pkp4-202ENSMUST00000102754 FcgbpE9Q0B5 2583 aa10.91□□□□□ -0.66
Pkp4-202ENSMUST00000102754 Gm9508A0A1W2P7W0 230 aa10.9□□□□□ -0.66
Pkp4-202ENSMUST00000102754 Smg1Q8BKX6 3658 aaKnown RBP10.88□□□□□ -0.67
Pkp4-202ENSMUST00000102754 LrbaQ9ESE1 2856 aa10.88□□□□□ -0.67
Pkp4-202ENSMUST00000102754 2310034C09RikQ9D746 214 aa10.88□□□□□ -0.67
Pkp4-202ENSMUST00000102754 Rnase13Q5GAM7 153 aa10.88□□□□□ -0.67
Pkp4-202ENSMUST00000102754 Gm26620Q9CY65 116 aa10.87□□□□□ -0.67
Pkp4-202ENSMUST00000102754 Gm36176A0A1W2P8D5 158 aa10.85□□□□□ -0.67
Pkp4-202ENSMUST00000102754 OxtP35454 125 aa10.85□□□□□ -0.67
Pkp4-202ENSMUST00000102754 Cypt14J3QPF7 87 aa10.83□□□□□ -0.68
Pkp4-202ENSMUST00000102754 NbdyA0A0N4SUI7 68 aa10.83□□□□□ -0.68
Pkp4-202ENSMUST00000102754 Gm10065F6TJM2 114 aa10.83□□□□□ -0.68
Pkp4-202ENSMUST00000102754 Mp68P56379 58 aa10.82□□□□□ -0.68
Pkp4-202ENSMUST00000102754 Gm884A2A9H6 3643 aa10.8□□□□□ -0.68
Pkp4-202ENSMUST00000102754 Gm21798J3QNU5 87 aa10.76□□□□□ -0.69
Pkp4-202ENSMUST00000102754 6030445D17RikE9Q8F9 148 aa10.75□□□□□ -0.69
Pkp4-202ENSMUST00000102754 Zfhx3Q61329 3726 aa10.75□□□□□ -0.69
Pkp4-202ENSMUST00000102754 Lama5Q61001 3718 aa10.74□□□□□ -0.69
Pkp4-202ENSMUST00000102754 A730071L15RikQ8C4X0 137 aa10.74□□□□□ -0.69
Pkp4-202ENSMUST00000102754 Gm10643Q3URG9 111 aa10.72□□□□□ -0.69
Pkp4-202ENSMUST00000102754 Tenm3Q9WTS6 2715 aa10.72□□□□□ -0.69
Pkp4-202ENSMUST00000102754 Sprr1aQ62266 144 aa10.7□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Gm17349F7BGH6 99 aa10.7□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Muc5acE9QAQ8 3455 aa10.69□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Srrm2Q8BTI8 2703 aaKnown RBP10.69□□□□□ -0.7
Pkp4-202ENSMUST00000102754 ApcQ61315 2845 aa10.68□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Gm10139O88245 57 aa10.67□□□□□ -0.7
Pkp4-202ENSMUST00000102754 TgO08710 2766 aa10.66□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Helz2E9QAM5 2947 aaKnown RBP10.66□□□□□ -0.7
Pkp4-202ENSMUST00000102754 Odf3bQ5M8M2 238 aa10.64□□□□□ -0.71
Pkp4-202ENSMUST00000102754 Pdzd2E9Q1M1 2796 aa10.62□□□□□ -0.71
Pkp4-202ENSMUST00000102754 SmcpP15265 143 aa10.57□□□□□ -0.72
Pkp4-202ENSMUST00000102754 Gm3880A0A1B0GSB3 72 aa10.54□□□□□ -0.72
Pkp4-202ENSMUST00000102754 Gm4491E0CX42 125 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms