RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Hist1h2bbQ64475 126 aa8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Ndufv3Q8BK30 104 aaKnown RBP8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 A930002H24RikQ8C8Y3 163 aa8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Hist1h2bkQ8CGP1 126 aaKnown RBP8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Hist1h2bpQ8CGP2 126 aaKnown RBP8.36□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 E130218I03RikA0A0U1RNU5 63 aa8.35□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 A830005F24RikQ8BRT5 167 aa8.35□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Krtap1-4Q3V2D6 188 aa8.34□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 H2al1nQ497L1 109 aa8.34□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 2310034C09RikQ9D746 214 aa8.34□□□□□ -1.07
Sf3b6-201ENSMUST00000046207 Ighv1-62-2A0A0A6YXZ4 119 aa8.33□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Igkv1-122A0A140T8M9 119 aa8.32□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Vamp3P63024 103 aa8.32□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Gm21886J3QJU9 214 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Lamtor3O88653 124 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Elof1P60003 83 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Gm10577Q3UDV9 132 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Cks1brtQ3UNC9 96 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Defb29Q8BGW9 78 aa8.31□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Gm29289A0A087WPY7 166 aa8.3□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Gm10318A0A1W2P728 225 aa8.3□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Pmp2P24526 132 aa8.3□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 SmagpQ99KC7 97 aa8.3□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Psmb2Q9R1P3 201 aa8.3□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Pcp4l1Q6W8Q3 68 aa8.29□□□□□ -1.08
Sf3b6-201ENSMUST00000046207 Vpreb3D3Z6J4 130 aa8.27□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Gm19668J3QMD1 248 aa8.27□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 A0A1Y7VJ07 166 aa8.26□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 5930422O12RikQ8C4Y4 123 aa8.26□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Tmem243B2RVB9 118 aa8.25□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Defb37Q7TMD2 62 aa8.25□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Igkv3-4A0A140T8Q4 119 aa8.24□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Hbb-bsA8DUK4 147 aa8.24□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Hbb-b1P02088 147 aa8.24□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Hint1P70349 126 aaKnown RBP8.24□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Igkv4-58A0A0G2JGI6 119 aa8.23□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 IqcjQ8BPW0 110 aa8.23□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 4930535I16RikQ9CUI2 172 aa8.23□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Trav12-3A0A075B648 115 aa8.22□□□□□ -1.09
Sf3b6-201ENSMUST00000046207 Gm28305F6U473 122 aa8.21□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Lst1O08843 95 aa8.21□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Muc5bE9Q5I3 4800 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 A0A286YE02 88 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Gm11596B1AQB0 205 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 A730071L15RikQ8C4X0 137 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Plac1Q9JI83 173 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Xlr5cQ9JJR2 179 aa8.2□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Gm16253D3Z167 63 aa8.19□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Rpl37Q9D823 97 aa8.19□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Timm17bQ9Z0V7 172 aa8.19□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 A030014E15RikA0A1Y7VJV2 120 aa8.18□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 MalO09198 153 aa8.18□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Cox8bP48772 70 aa8.18□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Triap1Q9D8Z2 76 aa8.18□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Igkv8-21A0A140T8P7 120 aa8.17□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Gm45753A0A1C7CYU8 86 aa8.17□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Glrp1E9Q9S8 174 aa8.17□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Lage3Q9CR70 148 aa8.17□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Gm44965A0A0N4SVR3 59 aa8.16□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Cops9Q3U898 57 aa8.15□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Gm5868Q8BJG1 145 aa8.15□□□□□ -1.1
Sf3b6-201ENSMUST00000046207 Igkv8-28A0A0G2JE47 121 aa8.14□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Q8BT88 171 aa8.13□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Gm5142Q8C5X9 133 aa8.13□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Trav4d-3A0A075B625 110 aa8.12□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Trav4n-4A0A075B615 110 aa8.11□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Gm7544A0A1Y7VJ58 118 aa8.11□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Cend1Q9JKC6 149 aa8.11□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 Lce1jD3YUU5 139 aa8.09□□□□□ -1.11
Sf3b6-201ENSMUST00000046207 A030005L19RikA0A1Y7VIU2 113 aa8.08□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm10401E9Q3K6 71 aa8.08□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Vmn1r197Q8R265 298 aa8.08□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm26620Q9CY65 116 aa8.08□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Hist2h2beQ64524 126 aa8.07□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Pam16Q9CQV1 125 aa8.07□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Ighv10-1A0A0B4J1J6 119 aa8.06□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm20458E9PXJ7 78 aa8.06□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm10295Q8CCF3 114 aa8.06□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Dpm2Q9Z324 84 aa8.06□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm10604Q3V0X7 143 aa8.05□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Mdn1A2ANY6 5589 aaKnown RBP8.05□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm10308Q9CVR5 141 aa8.04□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Gm37389A0A0A6YW05 95 aa8.03□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 Eif4ebp3Q80VV3 101 aa8.03□□□□□ -1.12
Sf3b6-201ENSMUST00000046207 2210017I01RikA0A0A6YVV1 95 aa8.02□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 SelenowP63300 88 aa8.02□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Uqcc3Q8K2T4 89 aa8.02□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Dnal4Q9DCM4 105 aa8.02□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Fam229aB2KGE5 128 aa8.01□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Gm9376G3UW68 176 aa8.01□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 1700018G05RikA0A1B0GSI2 66 aa8□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Plscr4P58196 326 aa8□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Krtap4-6Q3V4B7 195 aa7.99□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Trappc1Q5NCF2 145 aa7.99□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Chchd10Q7TNL9 138 aa7.98□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 Gm11027G8JL69 66 aa7.97□□□□□ -1.13
Sf3b6-201ENSMUST00000046207 P06320 134 aa7.96□□□□□ -1.14
Sf3b6-201ENSMUST00000046207 Gm28051J3QMA2 81 aa7.95□□□□□ -1.14
Sf3b6-201ENSMUST00000046207 Smim26Q3V460 107 aa7.95□□□□□ -1.14
Sf3b6-201ENSMUST00000046207 Gnb1lQ9EQ15 326 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms