RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Celsr1O35161 3034 aa9.74□□□□□ -0.85
Usp38-201ENSMUST00000042724 Tep1P97499 2629 aa9.74□□□□□ -0.85
Usp38-201ENSMUST00000042724 Gm36176A0A1W2P8D5 158 aa9.73□□□□□ -0.85
Usp38-201ENSMUST00000042724 H2al1kJ3QP08 105 aa9.73□□□□□ -0.85
Usp38-201ENSMUST00000042724 Gm10999F6Q4M4 69 aa9.72□□□□□ -0.85
Usp38-201ENSMUST00000042724 Bean1Q9EQG5 255 aa9.71□□□□□ -0.86
Usp38-201ENSMUST00000042724 Smim29Q8R043 75 aa9.7□□□□□ -0.86
Usp38-201ENSMUST00000042724 NbeaQ9EPN1 2936 aa9.7□□□□□ -0.86
Usp38-201ENSMUST00000042724 Spint4Q9D263 159 aa9.7□□□□□ -0.86
Usp38-201ENSMUST00000042724 Kmt2bO08550 2713 aa9.69□□□□□ -0.86
Usp38-201ENSMUST00000042724 Gm10065F6TJM2 114 aa9.68□□□□□ -0.86
Usp38-201ENSMUST00000042724 Frem2Q6NVD0 3160 aa9.68□□□□□ -0.86
Usp38-201ENSMUST00000042724 FryE9Q8I9 3020 aa9.67□□□□□ -0.86
Usp38-201ENSMUST00000042724 A530084C06RikQ3UTW2 186 aa9.67□□□□□ -0.86
Usp38-201ENSMUST00000042724 Hivep1Q03172 2688 aa9.67□□□□□ -0.86
Usp38-201ENSMUST00000042724 H2al1mQ9DAD9 105 aa9.66□□□□□ -0.86
Usp38-201ENSMUST00000042724 9230102O04RikA2ASX7 82 aa9.65□□□□□ -0.86
Usp38-201ENSMUST00000042724 Gm17349F7BGH6 99 aa9.65□□□□□ -0.86
Usp38-201ENSMUST00000042724 Anapc11Q9CPX9 84 aa9.65□□□□□ -0.86
Usp38-201ENSMUST00000042724 Celsr3Q91ZI0 3301 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 Dmxl2Q8BPN8 3032 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 Gm10320E9PW43 113 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 Nbeal2Q6ZQA0 2742 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 HrnrQ8VHD8 2496 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 Cypt15B1AXS0 87 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 4930507D05RikQ8C9C9 103 aa9.64□□□□□ -0.87
Usp38-201ENSMUST00000042724 BptfA2A654 3036 aaKnown RBP9.63□□□□□ -0.87
Usp38-201ENSMUST00000042724 Utp20Q5XG71 2788 aaKnown RBP9.62□□□□□ -0.87
Usp38-201ENSMUST00000042724 Coa5Q99M07 74 aa9.62□□□□□ -0.87
Usp38-201ENSMUST00000042724 Gm17606F6ZL36 78 aa9.62□□□□□ -0.87
Usp38-201ENSMUST00000042724 NbdyA0A0N4SUI7 68 aa9.61□□□□□ -0.87
Usp38-201ENSMUST00000042724 Adgrg4B7ZCC9 3073 aa9.59□□□□□ -0.87
Usp38-201ENSMUST00000042724 Cdc42se1Q8BHL7 80 aa9.59□□□□□ -0.87
Usp38-201ENSMUST00000042724 Pkd1l1Q8R526 2615 aa9.58□□□□□ -0.88
Usp38-201ENSMUST00000042724 Q8BGJ3 129 aa9.58□□□□□ -0.88
Usp38-201ENSMUST00000042724 Limd2Q8BGB5 128 aa9.58□□□□□ -0.88
Usp38-201ENSMUST00000042724 Stab2Q8R4U0 2559 aa9.58□□□□□ -0.88
Usp38-201ENSMUST00000042724 Brca2P97929 3329 aa9.57□□□□□ -0.88
Usp38-201ENSMUST00000042724 Sprr1aQ62266 144 aa9.57□□□□□ -0.88
Usp38-201ENSMUST00000042724 Cypt14J3QPF7 87 aa9.56□□□□□ -0.88
Usp38-201ENSMUST00000042724 Gm20661K7N787 53 aa9.55□□□□□ -0.88
Usp38-201ENSMUST00000042724 Itpr2Q9Z329 2701 aa9.54□□□□□ -0.88
Usp38-201ENSMUST00000042724 Fam229bQ8CF36 80 aa9.54□□□□□ -0.88
Usp38-201ENSMUST00000042724 FlncQ8VHX6 2726 aaKnown RBP9.54□□□□□ -0.88
Usp38-201ENSMUST00000042724 9530053A07RikE9PVG8 2581 aa9.54□□□□□ -0.88
Usp38-201ENSMUST00000042724 DspE9Q557 2883 aaKnown RBP9.53□□□□□ -0.88
Usp38-201ENSMUST00000042724 Col6a3E9PWQ3 3284 aa9.49□□□□□ -0.89
Usp38-201ENSMUST00000042724 Gm26620Q9CY65 116 aa9.46□□□□□ -0.9
Usp38-201ENSMUST00000042724 Defb1P56386 69 aa9.45□□□□□ -0.9
Usp38-201ENSMUST00000042724 Gm10139O88245 57 aa9.44□□□□□ -0.9
Usp38-201ENSMUST00000042724 Phxr4P15974 95 aa9.44□□□□□ -0.9
Usp38-201ENSMUST00000042724 6030445D17RikE9Q8F9 148 aa9.43□□□□□ -0.9
Usp38-201ENSMUST00000042724 Chtf8P0CG14 533 aa9.43□□□□□ -0.9
Usp38-201ENSMUST00000042724 VcanQ62059 3357 aa9.43□□□□□ -0.9
Usp38-201ENSMUST00000042724 Odf3bQ5M8M2 238 aa9.39□□□□□ -0.91
Usp38-201ENSMUST00000042724 Igfn1Q3KNY0 2849 aa9.39□□□□□ -0.91
Usp38-201ENSMUST00000042724 Gm9508A0A1W2P7W0 230 aa9.39□□□□□ -0.91
Usp38-201ENSMUST00000042724 Tex15F8VPN2 2785 aa9.38□□□□□ -0.91
Usp38-201ENSMUST00000042724 Dchs2A0A0A6YW72 3346 aa9.37□□□□□ -0.91
Usp38-201ENSMUST00000042724 Zzef1Q5SSH7 2924 aa9.37□□□□□ -0.91
Usp38-201ENSMUST00000042724 A730071L15RikQ8C4X0 137 aa9.34□□□□□ -0.91
Usp38-201ENSMUST00000042724 Uqcr11Q9CPX8 56 aa9.31□□□□□ -0.92
Usp38-201ENSMUST00000042724 Wdfy3Q6VNB8 3508 aa9.31□□□□□ -0.92
Usp38-201ENSMUST00000042724 Cystm1Q8K353 104 aa9.31□□□□□ -0.92
Usp38-201ENSMUST00000042724 Trank1Q8BV79 2999 aa9.28□□□□□ -0.92
Usp38-201ENSMUST00000042724 Tenm4Q3UHK6 2771 aa9.28□□□□□ -0.92
Usp38-201ENSMUST00000042724 Krtap29-1A2A5X4 342 aa9.27□□□□□ -0.93
Usp38-201ENSMUST00000042724 Rnase13Q5GAM7 153 aa9.26□□□□□ -0.93
Usp38-201ENSMUST00000042724 Gm12216A0A1W2P827 62 aa9.24□□□□□ -0.93
Usp38-201ENSMUST00000042724 2310034C09RikQ9D746 214 aa9.24□□□□□ -0.93
Usp38-201ENSMUST00000042724 2310061N02RikQ9D6S9 174 aa9.24□□□□□ -0.93
Usp38-201ENSMUST00000042724 Gm10643Q3URG9 111 aa9.22□□□□□ -0.93
Usp38-201ENSMUST00000042724 Gm16253D3Z167 63 aa9.22□□□□□ -0.93
Usp38-201ENSMUST00000042724 Celsr2Q9R0M0 2920 aa9.21□□□□□ -0.93
Usp38-201ENSMUST00000042724 Tenm3Q9WTS6 2715 aa9.2□□□□□ -0.94
Usp38-201ENSMUST00000042724 Chd9Q8BYH8 2885 aa9.19□□□□□ -0.94
Usp38-201ENSMUST00000042724 Gm9507D3Z5T3 223 aa9.19□□□□□ -0.94
Usp38-201ENSMUST00000042724 Dchs1E9PVD3 3291 aa9.18□□□□□ -0.94
Usp38-201ENSMUST00000042724 RelnQ60841 3461 aa9.17□□□□□ -0.94
Usp38-201ENSMUST00000042724 2310050C09RikG5E8Z3 280 aa9.17□□□□□ -0.94
Usp38-201ENSMUST00000042724 Gm9821Q8K076 103 aa9.16□□□□□ -0.94
Usp38-201ENSMUST00000042724 Nf1Q04690 2841 aa9.14□□□□□ -0.95
Usp38-201ENSMUST00000042724 FcgbpE9Q0B5 2583 aa9.14□□□□□ -0.95
Usp38-201ENSMUST00000042724 Krtap13O88375 197 aa9.12□□□□□ -0.95
Usp38-201ENSMUST00000042724 Gm21798J3QNU5 87 aa9.1□□□□□ -0.95
Usp38-201ENSMUST00000042724 Gm37013Q8K491 104 aa9.1□□□□□ -0.95
Usp38-201ENSMUST00000042724 Myo15aQ9QZZ4 3511 aa9.07□□□□□ -0.96
Usp38-201ENSMUST00000042724 DmdP11531 3678 aa9.07□□□□□ -0.96
Usp38-201ENSMUST00000042724 Gm4491E0CX42 125 aa9.07□□□□□ -0.96
Usp38-201ENSMUST00000042724 Srrm2Q8BTI8 2703 aaKnown RBP9.03□□□□□ -0.96
Usp38-201ENSMUST00000042724 Pdzd2E9Q1M1 2796 aa9.02□□□□□ -0.97
Usp38-201ENSMUST00000042724 SpegQ62407 3262 aa9□□□□□ -0.97
Usp38-201ENSMUST00000042724 TgO08710 2766 aa9□□□□□ -0.97
Usp38-201ENSMUST00000042724 Krtap14O08640 167 aa8.99□□□□□ -0.97
Usp38-201ENSMUST00000042724 Krtap10-4Q08EG8 221 aa8.99□□□□□ -0.97
Usp38-201ENSMUST00000042724 LrbaQ9ESE1 2856 aa8.98□□□□□ -0.97
Usp38-201ENSMUST00000042724 Vps13cQ8BX70 3748 aa8.97□□□□□ -0.97
Usp38-201ENSMUST00000042724 Krtap15-1Q9QZU5 150 aa8.95□□□□□ -0.98
Usp38-201ENSMUST00000042724 ApcQ61315 2845 aa8.92□□□□□ -0.98
Usp38-201ENSMUST00000042724 Tnp2P11378 117 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms