RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ighv2-9-1A0A075B697 116 aa10.58□□□□□ -0.72
Upf1-202ENSMUST00000215817 Smr3aQ61900 147 aa10.57□□□□□ -0.72
Upf1-202ENSMUST00000215817 P06320 134 aa10.57□□□□□ -0.72
Upf1-202ENSMUST00000215817 OtogO55225 2910 aa10.57□□□□□ -0.72
Upf1-202ENSMUST00000215817 Igkv3-10A0A0G2JGN0 119 aa10.57□□□□□ -0.72
Upf1-202ENSMUST00000215817 4930556J24RikQ9D4U7 146 aa10.57□□□□□ -0.72
Upf1-202ENSMUST00000215817 Vpreb3D3Z6J4 130 aa10.56□□□□□ -0.72
Upf1-202ENSMUST00000215817 Obox2E9PXV9 151 aa10.56□□□□□ -0.72
Upf1-202ENSMUST00000215817 4930524J08RikQ9CUJ5 163 aa10.56□□□□□ -0.72
Upf1-202ENSMUST00000215817 Fgf23Q9EPC2 251 aa10.56□□□□□ -0.72
Upf1-202ENSMUST00000215817 AI854703Q8BIN3 203 aa10.55□□□□□ -0.72
Upf1-202ENSMUST00000215817 H2al1bA0A087WP11 105 aa10.55□□□□□ -0.72
Upf1-202ENSMUST00000215817 BaalcQ8VHV1 145 aa10.55□□□□□ -0.72
Upf1-202ENSMUST00000215817 Snhg11Q4G0K9 87 aa10.54□□□□□ -0.72
Upf1-202ENSMUST00000215817 Atox1O08997 68 aaKnown RBP10.54□□□□□ -0.72
Upf1-202ENSMUST00000215817 1700011M02RikB1AX35 88 aa10.54□□□□□ -0.72
Upf1-202ENSMUST00000215817 H2al1aQ5M8Q2 105 aa10.54□□□□□ -0.72
Upf1-202ENSMUST00000215817 H2al1eQ810S6 105 aa10.54□□□□□ -0.72
Upf1-202ENSMUST00000215817 H2al1kJ3QP08 105 aa10.53□□□□□ -0.72
Upf1-202ENSMUST00000215817 CrygaP04345 174 aa10.53□□□□□ -0.72
Upf1-202ENSMUST00000215817 Gm5153P01627 120 aa10.53□□□□□ -0.72
Upf1-202ENSMUST00000215817 Rps28P62858 69 aaKnown RBP10.51□□□□□ -0.73
Upf1-202ENSMUST00000215817 Igkv3-5A0A140T8M6 119 aa10.51□□□□□ -0.73
Upf1-202ENSMUST00000215817 9530003J23RikQ8BM26 151 aa10.51□□□□□ -0.73
Upf1-202ENSMUST00000215817 Gm37389A0A0A6YW05 95 aa10.5□□□□□ -0.73
Upf1-202ENSMUST00000215817 Zfhx3Q61329 3726 aa10.5□□□□□ -0.73
Upf1-202ENSMUST00000215817 Gm43218A0A0G2JGT0 114 aa10.5□□□□□ -0.73
Upf1-202ENSMUST00000215817 Gm10577Q3UDV9 132 aa10.5□□□□□ -0.73
Upf1-202ENSMUST00000215817 E130208F15RikQ3UPV3 143 aa10.5□□□□□ -0.73
Upf1-202ENSMUST00000215817 BC025920Q3US60 128 aa10.49□□□□□ -0.73
Upf1-202ENSMUST00000215817 Igkv8-18A0A0B4J1J3 123 aa10.49□□□□□ -0.73
Upf1-202ENSMUST00000215817 Gm11011D3Z3L9 86 aa10.48□□□□□ -0.73
Upf1-202ENSMUST00000215817 AplnQ9R0R4 77 aa10.47□□□□□ -0.73
Upf1-202ENSMUST00000215817 Gm10772F7AIG4 85 aa10.46□□□□□ -0.73
Upf1-202ENSMUST00000215817 UqcrqQ9CQ69 82 aa10.46□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm17521F6QAC8 156 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Phxr5P08399 672 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Defb45Q3V490 66 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 MobpQ9D2P8 170 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 3110070M22RikQ9DAQ7 118 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Csmd1Q923L3 3564 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm9805F6YK59 57 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Wfdc10Q3V2J9 124 aa10.45□□□□□ -0.74
Upf1-202ENSMUST00000215817 Spint4Q9D263 159 aa10.44□□□□□ -0.74
Upf1-202ENSMUST00000215817 HrnrQ8VHD8 2496 aa10.44□□□□□ -0.74
Upf1-202ENSMUST00000215817 Ntn5Q3UQ22 452 aa10.44□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm17349F7BGH6 99 aa10.43□□□□□ -0.74
Upf1-202ENSMUST00000215817 Rpl28P41105 137 aaKnown RBP10.43□□□□□ -0.74
Upf1-202ENSMUST00000215817 Wfdc13Q5DQQ6 81 aa10.42□□□□□ -0.74
Upf1-202ENSMUST00000215817 Ighv10-1A0A0B4J1J6 119 aa10.42□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm10401E9Q3K6 71 aa10.42□□□□□ -0.74
Upf1-202ENSMUST00000215817 Defb40Q70KL2 73 aa10.42□□□□□ -0.74
Upf1-202ENSMUST00000215817 Adm2Q7TNK8 150 aa10.42□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm10845Q3UNY9 185 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 A530084C06RikQ3UTW2 186 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 Gm20604F8WIA3 75 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 Zfand2aQ9JII7 171 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 A730009L09RikA0A1B0GS82 72 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 Cd164Q9R0L9 197 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 Svep1A2AVA0 3567 aa10.41□□□□□ -0.74
Upf1-202ENSMUST00000215817 Igkv1-110A0A0B4J1I0 119 aa10.39□□□□□ -0.75
Upf1-202ENSMUST00000215817 P01819 144 aa10.38□□□□□ -0.75
Upf1-202ENSMUST00000215817 Cox7bP56393 80 aa10.38□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm5142Q8C5X9 133 aa10.38□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm12353A2AGJ4 60 aa10.38□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm10570F6VB42 170 aa10.38□□□□□ -0.75
Upf1-202ENSMUST00000215817 Tcl1b3P56842 122 aa10.37□□□□□ -0.75
Upf1-202ENSMUST00000215817 4930519P11RikQ9CUJ8 166 aa10.37□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm17509Q9CZ61 145 aa10.36□□□□□ -0.75
Upf1-202ENSMUST00000215817 ApcQ61315 2845 aa10.36□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm10197F6QEY5 67 aa10.36□□□□□ -0.75
Upf1-202ENSMUST00000215817 Igkv1-117A0A140T8M0 119 aa10.36□□□□□ -0.75
Upf1-202ENSMUST00000215817 A830005F24RikQ8BRT5 167 aa10.36□□□□□ -0.75
Upf1-202ENSMUST00000215817 Igkv3-12A0A140T8P0 119 aa10.35□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm9508A0A1W2P7W0 230 aa10.35□□□□□ -0.75
Upf1-202ENSMUST00000215817 Gm10837Q3UTT8 145 aa10.35□□□□□ -0.75
Upf1-202ENSMUST00000215817 H2al1mQ9DAD9 105 aa10.35□□□□□ -0.75
Upf1-202ENSMUST00000215817 Ndufb1P0DN34 57 aa10.34□□□□□ -0.75
Upf1-202ENSMUST00000215817 7530416G11RikJ3QJX6 159 aa10.33□□□□□ -0.76
Upf1-202ENSMUST00000215817 Krtap16-1A2A5X5 502 aa10.32□□□□□ -0.76
Upf1-202ENSMUST00000215817 Defb38Q7TNV7 63 aa10.32□□□□□ -0.76
Upf1-202ENSMUST00000215817 Ighv1-56A0A0A6YXG2 117 aa10.31□□□□□ -0.76
Upf1-202ENSMUST00000215817 Ccdc179J3QM76 67 aa10.31□□□□□ -0.76
Upf1-202ENSMUST00000215817 OxtP35454 125 aa10.31□□□□□ -0.76
Upf1-202ENSMUST00000215817 Gm10549Q3URY4 149 aa10.31□□□□□ -0.76
Upf1-202ENSMUST00000215817 Krtap11-1E9Q2E9 183 aa10.3□□□□□ -0.76
Upf1-202ENSMUST00000215817 Tcl1b5P56845 121 aa10.28□□□□□ -0.76
Upf1-202ENSMUST00000215817 Plac8Q9JI48 112 aa10.28□□□□□ -0.76
Upf1-202ENSMUST00000215817 Fam19a3Q7TPG6 132 aa10.28□□□□□ -0.76
Upf1-202ENSMUST00000215817 Muc4Q8JZM8 3443 aa10.27□□□□□ -0.77
Upf1-202ENSMUST00000215817 Ighv10-3A0A075B5T6 119 aa10.26□□□□□ -0.77
Upf1-202ENSMUST00000215817 A0A286YE49 62 aa10.26□□□□□ -0.77
Upf1-202ENSMUST00000215817 Coa6Q8BGD8 79 aa10.26□□□□□ -0.77
Upf1-202ENSMUST00000215817 Igkv3-4A0A140T8Q4 119 aa10.24□□□□□ -0.77
Upf1-202ENSMUST00000215817 1700074P13RikQ9D9G7 251 aa10.24□□□□□ -0.77
Upf1-202ENSMUST00000215817 Gm10267M0QWD8 85 aa10.23□□□□□ -0.77
Upf1-202ENSMUST00000215817 Ifitm6A0A1B0GS75 124 aa10.23□□□□□ -0.77
Upf1-202ENSMUST00000215817 Q8K1L6 76 aa10.23□□□□□ -0.77
Upf1-202ENSMUST00000215817 AW011738F6S7Q2 159 aa10.21□□□□□ -0.78
Upf1-202ENSMUST00000215817 Fbn1Q61554 2873 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms