RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Spata3Q9D9T6 193 aa8.37□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Rpl37aP61514 92 aa8.37□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Spaca4Q80ZQ0 127 aa8.36□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Jbts17Q8CE72 3214 aa8.35□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Cdh23Q99PF4 3354 aa8.35□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Ttc28Q80XJ3 2450 aa8.34□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Mki67E9PVX6 3177 aaKnown RBP8.34□□□□□ -1.07
Ssh1-202ENSMUST00000112298 Prr13Q9CQJ5 137 aa8.33□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Phxr4P15974 95 aa8.33□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Gm10643Q3URG9 111 aa8.32□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Tln1P26039 2541 aaKnown RBP8.32□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Uqcr11Q9CPX8 56 aa8.32□□□□□ -1.08
Ssh1-202ENSMUST00000112298 AW011738F6S7Q2 159 aa8.32□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Notch2O35516 2470 aa8.31□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Nav3Q80TN7 2359 aa8.31□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Sprr4Q8CGN8 76 aa8.3□□□□□ -1.08
Ssh1-202ENSMUST00000112298 AY074887Q8R5F9 132 aa8.28□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Sprr1bQ62267 153 aa8.28□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Defb1P56386 69 aa8.28□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Gm5617Q91VN2 117 aa8.28□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Pkd1l2Q7TN88 2461 aa8.28□□□□□ -1.08
Ssh1-202ENSMUST00000112298 Gm7276Q3TYW4 209 aa8.27□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Alms1Q8K4E0 3251 aa8.27□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Gm20538F6Z9R1 75 aa8.27□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Col12a1Q60847 3120 aa8.26□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Fam168bQ80XQ8 194 aa8.26□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Krtap11-1E9Q2E9 183 aa8.26□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Szt2A2A9C3 3431 aa8.26□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Hivep3A2A884 2348 aa8.22□□□□□ -1.09
Ssh1-202ENSMUST00000112298 1810062G17RikG3X8Y2 129 aa8.22□□□□□ -1.09
Ssh1-202ENSMUST00000112298 Hcfc1Q61191 2045 aaKnown RBP8.21□□□□□ -1.1
Ssh1-202ENSMUST00000112298 RetnlbQ99P86 105 aa8.2□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Eif4ebp3Q80VV3 101 aa8.2□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Vps13aQ5H8C4 3166 aa8.19□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Sptbn4E9PX29 2561 aa8.19□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Gm11213A0A1B0GR83 88 aa8.18□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Cypt15B1AXS0 87 aa8.18□□□□□ -1.1
Ssh1-202ENSMUST00000112298 PtprqP0C5E4 2300 aa8.18□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Rev3lQ61493 3122 aa8.17□□□□□ -1.1
Ssh1-202ENSMUST00000112298 Chd8Q09XV5 2582 aaKnown RBP8.17□□□□□ -1.1
Ssh1-202ENSMUST00000112298 A330070K13RikQ8CA53 115 aa8.14□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Myo15bI7HPW8 3033 aa8.14□□□□□ -1.11
Ssh1-202ENSMUST00000112298 CenpfE9Q3P4 2997 aaKnown RBP8.14□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Phxr5P08399 672 aa8.13□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Usp9xP70398 2559 aaKnown RBP8.13□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Rnase13Q5GAM7 153 aa8.13□□□□□ -1.11
Ssh1-202ENSMUST00000112298 C530025M09RikF6RGA8 229 aa8.12□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Tnrc18Q80WC3 2878 aa8.12□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Chd7A2AJK6 2986 aaKnown RBP8.11□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Lypd5Q9D7Z7 256 aa8.11□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Prune2Q52KR3 3084 aa8.09□□□□□ -1.11
Ssh1-202ENSMUST00000112298 Defb9Q8R2I6 67 aa8.08□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Gm26620Q9CY65 116 aa8.08□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Fam104aA2A6P4 185 aa8.08□□□□□ -1.12
Ssh1-202ENSMUST00000112298 CnbpP53996 178 aaKnown RBP8.07□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Chtf8P0CG14 533 aa8.06□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Ptpn13Q64512 2453 aa8.04□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Gm3250E9Q1M3 230 aa8.04□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Zcchc13Q9D548 170 aa8.03□□□□□ -1.12
Ssh1-202ENSMUST00000112298 CriptO70333 101 aa8.03□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Gm21798J3QNU5 87 aa8.03□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Zfp462B1AWL2 2495 aaKnown RBP8.02□□□□□ -1.12
Ssh1-202ENSMUST00000112298 Unc80Q8BLN6 3261 aa8.02□□□□□ -1.13
Ssh1-202ENSMUST00000112298 PolqQ8CGS6 2544 aa8□□□□□ -1.13
Ssh1-202ENSMUST00000112298 SetxA2AKX3 2646 aa7.99□□□□□ -1.13
Ssh1-202ENSMUST00000112298 Cep192E9Q4Y4 2514 aaKnown RBP7.98□□□□□ -1.13
Ssh1-202ENSMUST00000112298 AtmQ62388 3066 aa7.98□□□□□ -1.13
Ssh1-202ENSMUST00000112298 2310034C09RikQ9D746 214 aa7.97□□□□□ -1.13
Ssh1-202ENSMUST00000112298 Cypt14J3QPF7 87 aa7.97□□□□□ -1.13
Ssh1-202ENSMUST00000112298 OxtP35454 125 aa7.97□□□□□ -1.13
Ssh1-202ENSMUST00000112298 TrrapQ80YV3 2565 aaKnown RBP7.96□□□□□ -1.14
Ssh1-202ENSMUST00000112298 AspmQ8CJ27 3122 aa7.96□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Col6a3E9PWQ3 3284 aa7.96□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Pla2g10Q9QXX3 151 aa7.94□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Gm9955Q8CEJ8 102 aa7.94□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Anapc11Q9CPX9 84 aa7.93□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Fam229bQ8CF36 80 aa7.93□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Lrrc37aB1AWG4 3215 aa7.9□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Setd2E9Q5F9 2537 aa7.9□□□□□ -1.14
Ssh1-202ENSMUST00000112298 Plac8Q9JI48 112 aa7.9□□□□□ -1.15
Ssh1-202ENSMUST00000112298 Epg5Q80TA9 2572 aa7.88□□□□□ -1.15
Ssh1-202ENSMUST00000112298 Brca2P97929 3329 aa7.88□□□□□ -1.15
Ssh1-202ENSMUST00000112298 NbdyA0A0N4SUI7 68 aa7.88□□□□□ -1.15
Ssh1-202ENSMUST00000112298 Gm10065F6TJM2 114 aa7.86□□□□□ -1.15
Ssh1-202ENSMUST00000112298 MtorQ9JLN9 2549 aa7.86□□□□□ -1.15
Ssh1-202ENSMUST00000112298 MgaA2AWL7 3003 aaKnown RBP7.85□□□□□ -1.15
Ssh1-202ENSMUST00000112298 Gm9821Q8K076 103 aa7.84□□□□□ -1.15
Ssh1-202ENSMUST00000112298 Zfp292Q9Z2U2 2698 aa7.84□□□□□ -1.16
Ssh1-202ENSMUST00000112298 6030445D17RikE9Q8F9 148 aa7.82□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Gm3880A0A1B0GSB3 72 aa7.81□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Gm11565A2A4M7 156 aa7.81□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Bod1lE9Q6J5 3032 aa7.8□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Itpr1P11881 2749 aa7.79□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Gm4491E0CX42 125 aa7.78□□□□□ -1.16
Ssh1-202ENSMUST00000112298 Smim29Q8R043 75 aa7.78□□□□□ -1.16
Ssh1-202ENSMUST00000112298 KalrnA2CG49 2964 aa7.77□□□□□ -1.17
Ssh1-202ENSMUST00000112298 Bahcc1Q3UHR0 2643 aa7.77□□□□□ -1.17
Ssh1-202ENSMUST00000112298 Dmxl1Q6PNC0 3013 aa7.75□□□□□ -1.17
Ssh1-202ENSMUST00000112298 Odf3bQ5M8M2 238 aa7.73□□□□□ -1.17
Ssh1-202ENSMUST00000112298 Frem2Q6NVD0 3160 aa7.73□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms