RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 4930535I16RikQ9CUI2 172 aa10.22□□□□□ -0.77
Vcan-201ENSMUST00000109543 Elof1P60003 83 aa10.2□□□□□ -0.78
Vcan-201ENSMUST00000109543 9530003J23RikQ8BM26 151 aa10.2□□□□□ -0.78
Vcan-201ENSMUST00000109543 Defa4P28311 92 aa10.18□□□□□ -0.78
Vcan-201ENSMUST00000109543 Smim29Q8R043 75 aa10.18□□□□□ -0.78
Vcan-201ENSMUST00000109543 Ormdl1Q921I0 153 aa10.18□□□□□ -0.78
Vcan-201ENSMUST00000109543 Ntn5Q3UQ22 452 aa10.17□□□□□ -0.78
Vcan-201ENSMUST00000109543 Defb37Q7TMD2 62 aa10.17□□□□□ -0.78
Vcan-201ENSMUST00000109543 Defa16P50714 93 aa10.17□□□□□ -0.78
Vcan-201ENSMUST00000109543 Igkv8-21A0A140T8P7 120 aa10.15□□□□□ -0.78
Vcan-201ENSMUST00000109543 Dnah7bL7N1Y0 4068 aa10.15□□□□□ -0.79
Vcan-201ENSMUST00000109543 Dnah17Q69Z23 4481 aa10.15□□□□□ -0.79
Vcan-201ENSMUST00000109543 Tmem254aP0DN89 123 aa10.15□□□□□ -0.79
Vcan-201ENSMUST00000109543 Tmem254bP0DN90 123 aa10.15□□□□□ -0.79
Vcan-201ENSMUST00000109543 Tmem254cP0DN91 123 aa10.15□□□□□ -0.79
Vcan-201ENSMUST00000109543 Gm10308Q9CVR5 141 aa10.14□□□□□ -0.79
Vcan-201ENSMUST00000109543 Defa25Q5G864 92 aa10.13□□□□□ -0.79
Vcan-201ENSMUST00000109543 Sprr1aQ62266 144 aa10.13□□□□□ -0.79
Vcan-201ENSMUST00000109543 Gm7276Q3TYW4 209 aa10.12□□□□□ -0.79
Vcan-201ENSMUST00000109543 Gm10735Q3US96 136 aa10.12□□□□□ -0.79
Vcan-201ENSMUST00000109543 Igkv1-122A0A140T8M9 119 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Inafm2A0A1L1STD6 152 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Hist1h4aP62806 103 aaKnown RBP10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 MplkipQ9D011 178 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Dnah1E9Q8T7 4250 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Gm11627A6PWP4 55 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Ubl5Q9EPV8 73 aa10.11□□□□□ -0.79
Vcan-201ENSMUST00000109543 Rbm3O89086 153 aaKnown RBP10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 Pou2af1Q64693 256 aa10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 Fam168bQ80XQ8 194 aa10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 A730071L15RikQ8C4X0 137 aa10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 Cystm1Q8K353 104 aa10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 Apoc4Q61268 124 aa10.1□□□□□ -0.79
Vcan-201ENSMUST00000109543 Ighv2-5A0A0A6YY69 116 aa10.09□□□□□ -0.79
Vcan-201ENSMUST00000109543 PkigO70139 76 aa10.08□□□□□ -0.8
Vcan-201ENSMUST00000109543 P84750 121 aa10.08□□□□□ -0.8
Vcan-201ENSMUST00000109543 Wfdc6bF6ULY1 148 aa10.07□□□□□ -0.8
Vcan-201ENSMUST00000109543 Gm28539A0A087WSL9 92 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 Igkv3-12A0A140T8P0 119 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 Gm9508A0A1W2P7W0 230 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 7530416G11RikJ3QJX6 159 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 Fam19a1Q7TPG8 133 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 Dmac1Q9CQ00 111 aa10.06□□□□□ -0.8
Vcan-201ENSMUST00000109543 Pde6gP09174 87 aa10.05□□□□□ -0.8
Vcan-201ENSMUST00000109543 D130052B06RikQ3UW13 202 aa10.05□□□□□ -0.8
Vcan-201ENSMUST00000109543 Igkv8-28A0A0G2JE47 121 aa10.04□□□□□ -0.8
Vcan-201ENSMUST00000109543 Tmem243B2RVB9 118 aa10.04□□□□□ -0.8
Vcan-201ENSMUST00000109543 Obox2E9PXV9 151 aa10.04□□□□□ -0.8
Vcan-201ENSMUST00000109543 A0A286YE02 88 aa10.04□□□□□ -0.8
Vcan-201ENSMUST00000109543 Vpreb2P13373 142 aa10.03□□□□□ -0.8
Vcan-201ENSMUST00000109543 BaalcQ8VHV1 145 aa10.03□□□□□ -0.8
Vcan-201ENSMUST00000109543 AW011738F6S7Q2 159 aa10.02□□□□□ -0.8
Vcan-201ENSMUST00000109543 Fam19a5Q91WE9 132 aa10.02□□□□□ -0.8
Vcan-201ENSMUST00000109543 2310061N02RikQ9D6S9 174 aa10.02□□□□□ -0.8
Vcan-201ENSMUST00000109543 Igkv3-2A0A075B5P0 119 aa10.02□□□□□ -0.81
Vcan-201ENSMUST00000109543 Prol1E9PYQ4 312 aa10.01□□□□□ -0.81
Vcan-201ENSMUST00000109543 B9d2Q3UK10 175 aa10.01□□□□□ -0.81
Vcan-201ENSMUST00000109543 Gm17689B3GLJ4 109 aa10□□□□□ -0.81
Vcan-201ENSMUST00000109543 A830005F24RikQ8BRT5 167 aa9.99□□□□□ -0.81
Vcan-201ENSMUST00000109543 Csmd3Q80T79 3707 aa9.99□□□□□ -0.81
Vcan-201ENSMUST00000109543 Naa38Q9D2U5 125 aa9.99□□□□□ -0.81
Vcan-201ENSMUST00000109543 Sfta2E9PXB6 77 aa9.98□□□□□ -0.81
Vcan-201ENSMUST00000109543 Defa7P50705 93 aa9.98□□□□□ -0.81
Vcan-201ENSMUST00000109543 Gm11011D3Z3L9 86 aa9.97□□□□□ -0.81
Vcan-201ENSMUST00000109543 Ighv2-2A0A075B5P8 116 aa9.96□□□□□ -0.81
Vcan-201ENSMUST00000109543 Gm3618D3Z4P5 127 aa9.96□□□□□ -0.81
Vcan-201ENSMUST00000109543 Gm17349F7BGH6 99 aa9.96□□□□□ -0.81
Vcan-201ENSMUST00000109543 P01821 116 aa9.96□□□□□ -0.81
Vcan-201ENSMUST00000109543 Gm2916Q9D9B9 127 aa9.96□□□□□ -0.81
Vcan-201ENSMUST00000109543 SmcpP15265 143 aa9.96□□□□□ -0.82
Vcan-201ENSMUST00000109543 Gm20726G3UX18 150 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 Serp2Q6TAW2 65 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 Fam229bQ8CF36 80 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 TnxbO35452 4006 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 Smim20D3Z7Q2 69 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 ScxQ64124 207 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 A930002H24RikQ8C8Y3 163 aa9.95□□□□□ -0.82
Vcan-201ENSMUST00000109543 Igkv1-110A0A0B4J1I0 119 aa9.94□□□□□ -0.82
Vcan-201ENSMUST00000109543 Cox6a2P43023 97 aa9.94□□□□□ -0.82
Vcan-201ENSMUST00000109543 Defb40Q70KL2 73 aa9.94□□□□□ -0.82
Vcan-201ENSMUST00000109543 4930518I15RikQ3V2W7 57 aa9.93□□□□□ -0.82
Vcan-201ENSMUST00000109543 Sprr2jO70561 109 aa9.93□□□□□ -0.82
Vcan-201ENSMUST00000109543 P06320 134 aa9.93□□□□□ -0.82
Vcan-201ENSMUST00000109543 A330070K13RikQ8CA53 115 aa9.93□□□□□ -0.82
Vcan-201ENSMUST00000109543 Igsf10Q3V1M1 2594 aa9.92□□□□□ -0.82
Vcan-201ENSMUST00000109543 Gm37389A0A0A6YW05 95 aa9.91□□□□□ -0.82
Vcan-201ENSMUST00000109543 SycnQ8VCK7 134 aa9.91□□□□□ -0.82
Vcan-201ENSMUST00000109543 Gm4707V9GXN5 68 aa9.91□□□□□ -0.82
Vcan-201ENSMUST00000109543 Vpreb1P13372 142 aa9.9□□□□□ -0.82
Vcan-201ENSMUST00000109543 Ube2bP63147 152 aa9.9□□□□□ -0.82
Vcan-201ENSMUST00000109543 Vpreb3D3Z6J4 130 aa9.9□□□□□ -0.82
Vcan-201ENSMUST00000109543 Dync2h1Q45VK7 4306 aa9.9□□□□□ -0.83
Vcan-201ENSMUST00000109543 Huwe1Q7TMY8 4377 aaKnown RBP9.89□□□□□ -0.83
Vcan-201ENSMUST00000109543 PscaP57096 123 aa9.89□□□□□ -0.83
Vcan-201ENSMUST00000109543 Defa23Q5G866 93 aa9.89□□□□□ -0.83
Vcan-201ENSMUST00000109543 Defa21Q8C1P2 93 aa9.89□□□□□ -0.83
Vcan-201ENSMUST00000109543 Gm10837Q3UTT8 145 aa9.89□□□□□ -0.83
Vcan-201ENSMUST00000109543 Fam104aA2A6P4 185 aa9.88□□□□□ -0.83
Vcan-201ENSMUST00000109543 TgO08710 2766 aa9.88□□□□□ -0.83
Vcan-201ENSMUST00000109543 Megf8P60882 2789 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms