RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 Smim29Q8R043 75 aa10.34□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 4930535I16RikQ9CUI2 172 aa10.34□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 BB014433Q8C5R5 389 aa10.34□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Cdk2ap2Q9CPY4 127 aa10.34□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Defa16P50714 93 aa10.32□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Defa1P11477 93 aa10.32□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Defb37Q7TMD2 62 aa10.32□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Lamtor3O88653 124 aa10.31□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Elof1P60003 83 aa10.31□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Gm17349F7BGH6 99 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Igf1P05017 153 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Defa4P28311 92 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 BC048502Q80Y74 154 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Dnah1E9Q8T7 4250 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 9530003J23RikQ8BM26 151 aa10.3□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Pkd1l1Q8R526 2615 aa10.28□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Megf8P60882 2789 aa10.28□□□□□ -0.76
Ccdc43-201ENSMUST00000092569 Igkv8-21A0A140T8P7 120 aa10.27□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 B9d2Q3UK10 175 aa10.27□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Ormdl1Q921I0 153 aa10.27□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Sprr1aQ62266 144 aa10.26□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Ntn5Q3UQ22 452 aa10.26□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Fam168bQ80XQ8 194 aa10.25□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Cystm1Q8K353 104 aa10.25□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Gm7276Q3TYW4 209 aa10.24□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 A730071L15RikQ8C4X0 137 aa10.24□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Gm10308Q9CVR5 141 aa10.24□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Huwe1Q7TMY8 4377 aaKnown RBP10.23□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Igkv1-122A0A140T8M9 119 aa10.23□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Gm10735Q3US96 136 aa10.23□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Tmem254aP0DN89 123 aa10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Tmem254bP0DN90 123 aa10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Tmem254cP0DN91 123 aa10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Pou2af1Q64693 256 aa10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Gm11627A6PWP4 55 aa10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Hist1h4aP62806 103 aaKnown RBP10.22□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 FcgbpE9Q0B5 2583 aa10.21□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 P84750 121 aa10.21□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 MplkipQ9D011 178 aa10.21□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Stab2Q8R4U0 2559 aa10.21□□□□□ -0.77
Ccdc43-201ENSMUST00000092569 Defa25Q5G864 92 aa10.21□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Muc6Q80T03 2850 aa10.2□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Gm28539A0A087WSL9 92 aa10.2□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Apoc4Q61268 124 aa10.2□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Gm3618D3Z4P5 127 aa10.19□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Gm2916Q9D9B9 127 aa10.19□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Tenm2Q9WTS5 2764 aa10.19□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Rbm3O89086 153 aaKnown RBP10.19□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Inafm2A0A1L1STD6 152 aa10.18□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 2310061N02RikQ9D6S9 174 aa10.18□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Ighv2-5A0A0A6YY69 116 aa10.18□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Wfdc6bF6ULY1 148 aa10.18□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Ubl5Q9EPV8 73 aa10.18□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Igkv3-12A0A140T8P0 119 aa10.17□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 7530416G11RikJ3QJX6 159 aa10.17□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Fam19a1Q7TPG8 133 aa10.17□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Dmac1Q9CQ00 111 aa10.17□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 BaalcQ8VHV1 145 aa10.16□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Igkv8-28A0A0G2JE47 121 aa10.16□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 PkigO70139 76 aa10.16□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Vpreb2P13373 142 aa10.15□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 Gm4707V9GXN5 68 aa10.15□□□□□ -0.78
Ccdc43-201ENSMUST00000092569 A0A286YE02 88 aa10.15□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Fam19a5Q91WE9 132 aa10.15□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Tmem243B2RVB9 118 aa10.14□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Obox2E9PXV9 151 aa10.14□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 TgO08710 2766 aa10.14□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Dync2h1Q45VK7 4306 aa10.14□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 D130052B06RikQ3UW13 202 aa10.13□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 AW011738F6S7Q2 159 aa10.12□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Igkv3-2A0A075B5P0 119 aa10.12□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Gm17689B3GLJ4 109 aa10.12□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Prol1E9PYQ4 312 aa10.12□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Pde6gP09174 87 aa10.12□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 PrkdcP97313 4128 aa10.11□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Naa38Q9D2U5 125 aa10.1□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Gm9507D3Z5T3 223 aa10.09□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 Fam229bQ8CF36 80 aa10.09□□□□□ -0.79
Ccdc43-201ENSMUST00000092569 A830005F24RikQ8BRT5 167 aa10.08□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Gm11011D3Z3L9 86 aa10.08□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 ScxQ64124 207 aa10.08□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 SmcpP15265 143 aa10.07□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Defb40Q70KL2 73 aa10.07□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Defa7P50705 93 aa10.07□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 A930002H24RikQ8C8Y3 163 aa10.07□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Igkv1-110A0A0B4J1I0 119 aa10.06□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Smim20D3Z7Q2 69 aa10.06□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Ighv2-2A0A075B5P8 116 aa10.05□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 P01821 116 aa10.05□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 A330070K13RikQ8CA53 115 aa10.05□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Sfta2E9PXB6 77 aa10.04□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Gm20726G3UX18 150 aa10.04□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Cox6a2P43023 97 aa10.04□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 P06320 134 aa10.04□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Defa23Q5G866 93 aa10.04□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Fras1Q80T14 4010 aa10.03□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 4930518I15RikQ3V2W7 57 aa10.03□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Serp2Q6TAW2 65 aa10.03□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Vpreb1P13372 142 aa10.02□□□□□ -0.8
Ccdc43-201ENSMUST00000092569 Defa27F2Z403 93 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms