RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Pla2g1bQ9Z0Y2 146 aa14.73□□□□□ -0.05
Ccdc9-201ENSMUST00000041010 Igkv8-34A0A0G2JDU0 121 aa14.72□□□□□ -0.05
Ccdc9-201ENSMUST00000041010 Bean1Q9EQG5 255 aa14.71□□□□□ -0.05
Ccdc9-201ENSMUST00000041010 AtrQ9JKK8 2635 aa14.71□□□□□ -0.05
Ccdc9-201ENSMUST00000041010 P06320 134 aa14.7□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Tcl1b5P56845 121 aa14.7□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Gm10401E9Q3K6 71 aa14.69□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Gm10770F7D043 238 aa14.69□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Msrb1Q9JLC3 116 aa14.68□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Igkv8-16A0A0G2JDG9 121 aa14.67□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Cmc4Q61908 68 aa14.67□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Reg3dQ9QUS9 175 aa14.67□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 2310034G01RikA0A286YDL3 209 aa14.66□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Gm10570F6VB42 170 aa14.66□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Prh1P05142 261 aa14.66□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Wfdc12Q9JHY3 85 aa14.66□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 Fn1P11276 2477 aaKnown RBP14.65□□□□□ -0.06
Ccdc9-201ENSMUST00000041010 E130218I03RikA0A0U1RNU5 63 aa14.63□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Spink8Q09TK9 105 aa14.63□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Igfn1Q3KNY0 2849 aa14.62□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Defa28D3Z1V9 94 aa14.62□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Tex15F8VPN2 2785 aa14.62□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Q8BT88 171 aa14.61□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Nbeal2Q6ZQA0 2742 aa14.6□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Igkv8-28A0A0G2JE47 121 aa14.59□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Igkv4-61A0A0G2JH00 117 aa14.59□□□□□ -0.07
Ccdc9-201ENSMUST00000041010 Igkv8-24A0A140T8P5 121 aa14.58□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 Tenm1Q9WTS4 2731 aa14.57□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 AY074887Q8R5F9 132 aa14.57□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 Igkv4-54A0A0G2JES9 117 aa14.55□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 PrcdQ00LT2 53 aa14.55□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 Igkv3-9A0A140T8P4 119 aa14.54□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 A930002H24RikQ8C8Y3 163 aa14.54□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 Gm11011D3Z3L9 86 aa14.53□□□□□ -0.08
Ccdc9-201ENSMUST00000041010 Defb10Q8R2I8 73 aa14.52□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Wfdc17Q5SSJ1 76 aa14.51□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Spata3Q9D9T6 193 aa14.51□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Elof1P60003 83 aa14.5□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Spint4Q9D263 159 aa14.5□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Hivep1Q03172 2688 aa14.5□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Nsd1O88491 2588 aaKnown RBP14.5□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Klk9Q32M27 251 aa14.48□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 A330070K13RikQ8CA53 115 aa14.47□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Stab1Q8R4Y4 2571 aa14.47□□□□□ -0.09
Ccdc9-201ENSMUST00000041010 Cdc42se1Q8BHL7 80 aa14.46□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Krtap11-1E9Q2E9 183 aa14.45□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Hspg2Q05793 3707 aaKnown RBP14.45□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Defb37Q7TMD2 62 aa14.45□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Prr15lQ8JZM2 100 aa14.44□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Ufsp1Q9CZP0 217 aa14.44□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Sprr2jO70561 109 aa14.42□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Hivep3A2A884 2348 aa14.42□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Notch2O35516 2470 aa14.42□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Gm28374F6SG70 93 aa14.41□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 BC048502Q80Y74 154 aa14.41□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Brwd1Q921C3 2304 aa14.4□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 D730001G18RikA0A087WQU7 115 aa14.4□□□□□ -0.1
Ccdc9-201ENSMUST00000041010 Gm5617Q91VN2 117 aa14.39□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Cd164Q9R0L9 197 aa14.39□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Coa6Q8BGD8 79 aa14.38□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Gm17509Q9CZ61 145 aa14.38□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 AI606181Q8C7B9 129 aa14.37□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Igkv4-92A0A0B4J1I2 117 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Gm10197F6QEY5 67 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Leap2Q91V13 76 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Igkv3-2A0A075B5P0 119 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Igkv1-88A0A140T8N1 120 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Gm17577J3QNF7 156 aa14.36□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Sfta2E9PXB6 77 aa14.35□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Dad1P61804 113 aa14.35□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Phxr5P08399 672 aa14.34□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Gm7276Q3TYW4 209 aa14.33□□□□□ -0.11
Ccdc9-201ENSMUST00000041010 Igkv3-10A0A0G2JGN0 119 aa14.32□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 6430550D23RikE9Q1X6 194 aa14.32□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Gm16181B0V2H2 73 aa14.31□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Sec61gP60060 68 aa14.31□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Srrm2Q8BTI8 2703 aaKnown RBP14.31□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Gm36176A0A1W2P8D5 158 aa14.31□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Cdk2ap2Q9CPY4 127 aa14.31□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 A0A286YCN5 57 aa14.3□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Igkv1-122A0A140T8M9 119 aa14.28□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 ApcQ61315 2845 aa14.28□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 PolqQ8CGS6 2544 aa14.28□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Gm7138L7N2C3 230 aa14.27□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Gm3238W4VSP7 230 aa14.27□□□□□ -0.12
Ccdc9-201ENSMUST00000041010 Col6a5A6H584 2640 aa14.27□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 C130032M10RikQ8C888 123 aa14.26□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 Cox7b2Q9D2H1 82 aa14.26□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 A730009L09RikA0A1B0GS82 72 aa14.24□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 Igkv3-1A0A075B5P1 119 aa14.24□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 Cox6a2P43023 97 aa14.24□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 Igkv8-19A0A0G2JFN8 121 aa14.23□□□□□ -0.13
Ccdc9-201ENSMUST00000041010 Sox16Q62247 57 aa14.2□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 Coa5Q99M07 74 aa14.2□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 Mrpl34Q99N91 92 aa14.2□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 A0A286YE02 88 aa14.19□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 4933415A04RikQ9D443 101 aa14.18□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 Trav14-1A0A0G2JF94 121 aa14.17□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 Defb12Q8K4N3 78 aa14.17□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 PtprqP0C5E4 2300 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 106.4 ms