RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Gm35339A0A140LHH9 1649 aa42.51■■■■■ 4.4
Ccdc9-201ENSMUST00000041010 NischQ80TM9 1593 aa42.44■■■■■ 4.38
Ccdc9-201ENSMUST00000041010 Abcc9P70170 1546 aa41.27■■■■■ 4.2
Ccdc9-201ENSMUST00000041010 Abcc8B2RUS7 1588 aa40.62■■■■■ 4.09
Ccdc9-201ENSMUST00000041010 ScribQ80U72 1612 aa38.33■■■■□ 3.73
Ccdc9-201ENSMUST00000041010 Dcaf1Q80TR8 1506 aa37.94■■■■□ 3.66
Ccdc9-201ENSMUST00000041010 Rhox8Q6VSS7 320 aa37.87■■■■□ 3.65
Ccdc9-201ENSMUST00000041010 Rtl1Q7M732 1744 aa37.43■■■■□ 3.58
Ccdc9-201ENSMUST00000041010 Kdm5dQ62240 1548 aa37.39■■■■□ 3.58
Ccdc9-201ENSMUST00000041010 Rpgrip1Q9EPQ2 1331 aa37.32■■■■□ 3.56
Ccdc9-201ENSMUST00000041010 NacadQ5SWP3 1504 aa37.3■■■■□ 3.56
Ccdc9-201ENSMUST00000041010 Rb1cc1Q9ESK9 1588 aa37.13■■■■□ 3.53
Ccdc9-201ENSMUST00000041010 Ccdc180J3QNE4 1664 aa37.09■■■■□ 3.53
Ccdc9-201ENSMUST00000041010 Baz1aO88379 1555 aa36.73■■■■□ 3.47
Ccdc9-201ENSMUST00000041010 Sycp2Q9CUU3 1500 aa36.5■■■■□ 3.43
Ccdc9-201ENSMUST00000041010 Crybg2B7ZCC2 1516 aa36.41■■■■□ 3.42
Ccdc9-201ENSMUST00000041010 Acin1Q9JIX8 1338 aaKnown RBP36.09■■■■□ 3.37
Ccdc9-201ENSMUST00000041010 Zcchc6Q5BLK4 1491 aaKnown RBP35.88■■■■□ 3.33
Ccdc9-201ENSMUST00000041010 Smarca2Q6DIC0 1577 aa35.82■■■■□ 3.33
Ccdc9-201ENSMUST00000041010 BicraF8VPZ9 1578 aa35.75■■■■□ 3.31
Ccdc9-201ENSMUST00000041010 Pcgf6Q99NA9 353 aa35.3■■■■□ 3.24
Ccdc9-201ENSMUST00000041010 Ccdc136Q3TVA9 1136 aa35.18■■■■□ 3.22
Ccdc9-201ENSMUST00000041010 Cecr2E9Q2Z1 1453 aa34.97■■■■□ 3.19
Ccdc9-201ENSMUST00000041010 Ehmt2Q9Z148 1263 aaKnown RBP34.95■■■■□ 3.19
Ccdc9-201ENSMUST00000041010 HrcG5E8J6 738 aa34.93■■■■□ 3.18
Ccdc9-201ENSMUST00000041010 Brd4Q9ESU6 1400 aaKnown RBP34.84■■■■□ 3.17
Ccdc9-201ENSMUST00000041010 Trim41Q5NCC3 630 aa34.84■■■■□ 3.17
Ccdc9-201ENSMUST00000041010 Smarca4Q3TKT4 1613 aaKnown RBP34.75■■■■□ 3.15
Ccdc9-201ENSMUST00000041010 Synj1Q8CHC4 1574 aa34.6■■■■□ 3.13
Ccdc9-201ENSMUST00000041010 Cttnbp2B9EJA2 1648 aa34.53■■■■□ 3.12
Ccdc9-201ENSMUST00000041010 CftrP26361 1476 aa34.51■■■■□ 3.12
Ccdc9-201ENSMUST00000041010 Pds5bQ4VA53 1446 aaKnown RBP34.44■■■■□ 3.1
Ccdc9-201ENSMUST00000041010 Atad2bE9Q166 1460 aaKnown RBP34.42■■■■□ 3.1
Ccdc9-201ENSMUST00000041010 Iqgap2Q3UQ44 1575 aa34.33■■■■□ 3.09
Ccdc9-201ENSMUST00000041010 Supt5hO55201 1082 aaKnown RBP34.28■■■■□ 3.08
Ccdc9-201ENSMUST00000041010 Golga3P55937 1487 aa34.12■■■■□ 3.05
Ccdc9-201ENSMUST00000041010 Neurod1Q60867 357 aa34.01■■■■□ 3.03
Ccdc9-201ENSMUST00000041010 Top2bQ64511 1612 aa34■■■■□ 3.03
Ccdc9-201ENSMUST00000041010 Esf1Q3V1V3 845 aaKnown RBP33.85■■■■□ 3.01
Ccdc9-201ENSMUST00000041010 Wdr62Q3U3T8 1523 aa33.82■■■■□ 3
Ccdc9-201ENSMUST00000041010 Cngb1E1AZ71 1325 aa33.8■■■■□ 3
Ccdc9-201ENSMUST00000041010 Las1lA2BE28 776 aaKnown RBP33.77■■■■□ 3
Ccdc9-201ENSMUST00000041010 Ercc6F8VPZ5 1481 aa33.76■■■■□ 3
Ccdc9-201ENSMUST00000041010 Cep164Q5DU05 1446 aa33.76■■■□□ 2.99
Ccdc9-201ENSMUST00000041010 Frmpd1A2AKB4 1549 aa33.72■■■□□ 2.99
Ccdc9-201ENSMUST00000041010 Thoc2B1AZI6 1594 aaKnown RBP33.66■■■□□ 2.98
Ccdc9-201ENSMUST00000041010 Rsf1E9PWW9 1441 aaKnown RBP33.59■■■□□ 2.97
Ccdc9-201ENSMUST00000041010 Cc2d2aQ8CFW7 1633 aa33.56■■■□□ 2.96
Ccdc9-201ENSMUST00000041010 Ccdc88bQ4QRL3 1481 aa33.52■■■□□ 2.96
Ccdc9-201ENSMUST00000041010 Fmn1Q05860 1466 aa33.48■■■□□ 2.95
Ccdc9-201ENSMUST00000041010 Unc13aQ4KUS2 1712 aa33.45■■■□□ 2.95
Ccdc9-201ENSMUST00000041010 Chic1Q8CBW7 227 aa33.37■■■□□ 2.93
Ccdc9-201ENSMUST00000041010 TnnQ80Z71 1560 aa33.33■■■□□ 2.93
Ccdc9-201ENSMUST00000041010 NefmP08553 848 aa33.26■■■□□ 2.91
Ccdc9-201ENSMUST00000041010 Zeb1Q64318 1117 aa33.24■■■□□ 2.91
Ccdc9-201ENSMUST00000041010 Lamc3Q9R0B6 1581 aa33.23■■■□□ 2.91
Ccdc9-201ENSMUST00000041010 Fam135aQ6NS59 1506 aa33.2■■■□□ 2.9
Ccdc9-201ENSMUST00000041010 Phldb1Q6PDH0 1371 aaKnown RBP33.19■■■□□ 2.9
Ccdc9-201ENSMUST00000041010 Top2aQ01320 1528 aaKnown RBP33.16■■■□□ 2.9
Ccdc9-201ENSMUST00000041010 1700123L14RikQ3V2K7 440 aa33.15■■■□□ 2.9
Ccdc9-201ENSMUST00000041010 Anks4bQ8K3X6 423 aa33.15■■■□□ 2.9
Ccdc9-201ENSMUST00000041010 Sall2Q9QX96 1004 aa33.06■■■□□ 2.88
Ccdc9-201ENSMUST00000041010 Kif15Q6P9L6 1387 aa32.94■■■□□ 2.86
Ccdc9-201ENSMUST00000041010 Myt1Q8CFC2 1127 aa32.93■■■□□ 2.86
Ccdc9-201ENSMUST00000041010 Baz1bQ9Z277 1479 aa32.93■■■□□ 2.86
Ccdc9-201ENSMUST00000041010 Csrnp3P59055 597 aa32.88■■■□□ 2.85
Ccdc9-201ENSMUST00000041010 Mier1Q5UAK0 511 aa32.85■■■□□ 2.85
Ccdc9-201ENSMUST00000041010 Camsap1A2AHC3 1581 aa32.79■■■□□ 2.84
Ccdc9-201ENSMUST00000041010 Gab3Q8BSM5 595 aa32.75■■■□□ 2.83
Ccdc9-201ENSMUST00000041010 CenpbP27790 599 aa32.74■■■□□ 2.83
Ccdc9-201ENSMUST00000041010 Rapgef2Q8CHG7 1496 aa32.72■■■□□ 2.83
Ccdc9-201ENSMUST00000041010 Ubl4bQ9CQ84 188 aa32.7■■■□□ 2.83
Ccdc9-201ENSMUST00000041010 Ccdc18Q640L5 1455 aa32.68■■■□□ 2.82
Ccdc9-201ENSMUST00000041010 Aplp2Q06335 707 aa32.65■■■□□ 2.82
Ccdc9-201ENSMUST00000041010 Cux2P70298 1426 aa32.61■■■□□ 2.81
Ccdc9-201ENSMUST00000041010 NrkQ9R0G8 1455 aa32.49■■■□□ 2.79
Ccdc9-201ENSMUST00000041010 Eif4g1Q6NZJ6 1600 aaKnown RBP32.45■■■□□ 2.78
Ccdc9-201ENSMUST00000041010 Grin2bQ01097 1482 aa32.44■■■□□ 2.78
Ccdc9-201ENSMUST00000041010 Dnajc5bQ9CQ94 199 aa32.41■■■□□ 2.78
Ccdc9-201ENSMUST00000041010 Cep162Q6ZQ06 1403 aa32.41■■■□□ 2.78
Ccdc9-201ENSMUST00000041010 Cdk11bP24788 784 aaKnown RBP32.4■■■□□ 2.78
Ccdc9-201ENSMUST00000041010 Shroom4Q1W617 1475 aa32.38■■■□□ 2.77
Ccdc9-201ENSMUST00000041010 Mrc2Q64449 1479 aa32.37■■■□□ 2.77
Ccdc9-201ENSMUST00000041010 Il27Q8K3I6 234 aa32.33■■■□□ 2.77
Ccdc9-201ENSMUST00000041010 Npm1Q61937 292 aaKnown RBP32.31■■■□□ 2.76
Ccdc9-201ENSMUST00000041010 PtprkP35822 1457 aa32.28■■■□□ 2.76
Ccdc9-201ENSMUST00000041010 Nop58Q6DFW4 536 aaKnown RBP32.28■■■□□ 2.76
Ccdc9-201ENSMUST00000041010 ClspnQ80YR7 1315 aa32.25■■■□□ 2.75
Ccdc9-201ENSMUST00000041010 Aebp2Q9Z248 504 aaKnown RBP32.25■■■□□ 2.75
Ccdc9-201ENSMUST00000041010 LrpprcQ6PB66 1392 aaKnown RBP32.25■■■□□ 2.75
Ccdc9-201ENSMUST00000041010 Wdr66E9Q743 1299 aa32.24■■■□□ 2.75
Ccdc9-201ENSMUST00000041010 Npm2Q80W85 207 aa32.22■■■□□ 2.75
Ccdc9-201ENSMUST00000041010 PogzQ8BZH4 1409 aaKnown RBP32.2■■■□□ 2.74
Ccdc9-201ENSMUST00000041010 Arhgap35Q91YM2 1499 aa32.15■■■□□ 2.74
Ccdc9-201ENSMUST00000041010 Efcab5A0JP43 1406 aa32.15■■■□□ 2.74
Ccdc9-201ENSMUST00000041010 Map3k1P53349 1493 aa32.15■■■□□ 2.74
Ccdc9-201ENSMUST00000041010 Kif21aQ9QXL2 1672 aa32.12■■■□□ 2.73
Ccdc9-201ENSMUST00000041010 Duox2A2AQ99 1517 aa32.07■■■□□ 2.73
Ccdc9-201ENSMUST00000041010 Dhx29Q6PGC1 1365 aaKnown RBP32.03■■■□□ 2.72
Ccdc9-201ENSMUST00000041010 Mroh2bQ7M6Y6 1581 aa32.01■■■□□ 2.72
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms