RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Igkv8-30A0A140T8M3 121 aa10.31□□□□□ -0.76
Scaf4-201ENSMUST00000039280 UqcrqQ9CQ69 82 aa10.31□□□□□ -0.76
Scaf4-201ENSMUST00000039280 4930519P11RikQ9CUJ8 166 aa10.31□□□□□ -0.76
Scaf4-201ENSMUST00000039280 1810062G17RikG3X8Y2 129 aa10.3□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Ighv2-9A0A075B5Q5 116 aa10.3□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Hivep1Q03172 2688 aa10.3□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Gm37389A0A0A6YW05 95 aa10.3□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Tcl1b5P56845 121 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Igkv8-21A0A140T8P7 120 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Trav14-1A0A0G2JF94 121 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Gm16485Q8C4B7 115 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Gm9903Q8C9Y8 129 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Gm10308Q9CVR5 141 aa10.29□□□□□ -0.76
Scaf4-201ENSMUST00000039280 Obox2E9PXV9 151 aa10.28□□□□□ -0.76
Scaf4-201ENSMUST00000039280 SmcpP15265 143 aa10.28□□□□□ -0.76
Scaf4-201ENSMUST00000039280 LrbaQ9ESE1 2856 aa10.27□□□□□ -0.76
Scaf4-201ENSMUST00000039280 A530084C06RikQ3UTW2 186 aa10.27□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Defb50Q6TU36 73 aa10.26□□□□□ -0.77
Scaf4-201ENSMUST00000039280 A830005F24RikQ8BRT5 167 aa10.26□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm10570F6VB42 170 aa10.26□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Ighv2-5A0A0A6YY69 116 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 P01819 144 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm17509Q9CZ61 145 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm10401E9Q3K6 71 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Lama5Q61001 3718 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 PscaP57096 123 aa10.25□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm4707V9GXN5 68 aa10.24□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Nbeal2Q6ZQA0 2742 aa10.24□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm17521F6QAC8 156 aa10.23□□□□□ -0.77
Scaf4-201ENSMUST00000039280 A730009L09RikA0A1B0GS82 72 aa10.22□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Defb40Q70KL2 73 aa10.22□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Snhg11Q4G0K9 87 aa10.22□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm16181B0V2H2 73 aa10.22□□□□□ -0.77
Scaf4-201ENSMUST00000039280 U90926O08546 118 aa10.22□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Ube2aQ9Z255 152 aa10.21□□□□□ -0.77
Scaf4-201ENSMUST00000039280 Gm17689B3GLJ4 109 aa10.21□□□□□ -0.78
Scaf4-201ENSMUST00000039280 SycnQ8VCK7 134 aa10.2□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Msrb1Q9JLC3 116 aa10.2□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Nupr2Q497P3 102 aa10.2□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Defb37Q7TMD2 62 aa10.2□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Gm7138L7N2C3 230 aa10.19□□□□□ -0.78
Scaf4-201ENSMUST00000039280 E130208F15RikQ3UPV3 143 aa10.19□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Gm3238W4VSP7 230 aa10.19□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Igsf10Q3V1M1 2594 aa10.19□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Cystm1Q8K353 104 aa10.18□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Atox1O08997 68 aaKnown RBP10.18□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Sprr2jO70561 109 aa10.18□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Znf414Q9DCK4 299 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Gm12353A2AGJ4 60 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Sox16Q62247 57 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Cd164Q9R0L9 197 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Krtap11-1E9Q2E9 183 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Psors1c2Q80ZC9 134 aa10.17□□□□□ -0.78
Scaf4-201ENSMUST00000039280 2310034G01RikA0A286YDL3 209 aa10.16□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Fam229bQ8CF36 80 aa10.16□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Spint4Q9D263 159 aa10.16□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Wfdc13Q5DQQ6 81 aa10.16□□□□□ -0.78
Scaf4-201ENSMUST00000039280 H2al1bA0A087WP11 105 aa10.15□□□□□ -0.78
Scaf4-201ENSMUST00000039280 H2al1kJ3QP08 105 aa10.15□□□□□ -0.78
Scaf4-201ENSMUST00000039280 H2al1eQ810S6 105 aa10.15□□□□□ -0.78
Scaf4-201ENSMUST00000039280 H2al1mQ9DAD9 105 aa10.15□□□□□ -0.78
Scaf4-201ENSMUST00000039280 9230102O04RikA2ASX7 82 aa10.15□□□□□ -0.78
Scaf4-201ENSMUST00000039280 Igkv3-5A0A140T8M6 119 aa10.15□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Tenm3Q9WTS6 2715 aa10.14□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Ighv2-2A0A075B5P8 116 aa10.14□□□□□ -0.79
Scaf4-201ENSMUST00000039280 P01821 116 aa10.14□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Itpr2Q9Z329 2701 aa10.14□□□□□ -0.79
Scaf4-201ENSMUST00000039280 BaalcQ8VHV1 145 aa10.14□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Zfhx3Q61329 3726 aa10.13□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Tex15F8VPN2 2785 aa10.13□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Gm10197F6QEY5 67 aa10.13□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Coa6Q8BGD8 79 aa10.13□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Muc5acE9QAQ8 3455 aa10.12□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Vpreb3D3Z6J4 130 aa10.12□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Gm7137J3QMW1 236 aa10.12□□□□□ -0.79
Scaf4-201ENSMUST00000039280 HrnrQ8VHD8 2496 aa10.1□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Wfdc10Q3V2J9 124 aa10.1□□□□□ -0.79
Scaf4-201ENSMUST00000039280 6430550D23RikE9Q1X6 194 aa10.09□□□□□ -0.79
Scaf4-201ENSMUST00000039280 Sprr1bQ62267 153 aa10.08□□□□□ -0.8
Scaf4-201ENSMUST00000039280 CnbpP53996 178 aaKnown RBP10.08□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Igkv1-110A0A0B4J1I0 119 aa10.07□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Igkv3-10A0A0G2JGN0 119 aa10.07□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Spata3Q9D9T6 193 aa10.06□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Pkd1l1Q8R526 2615 aa10.06□□□□□ -0.8
Scaf4-201ENSMUST00000039280 AplnQ9R0R4 77 aa10.06□□□□□ -0.8
Scaf4-201ENSMUST00000039280 C530025M09RikF6RGA8 229 aa10.05□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Gm10770F7D043 238 aa10.05□□□□□ -0.8
Scaf4-201ENSMUST00000039280 9530053A07RikE9PVG8 2581 aa10.05□□□□□ -0.8
Scaf4-201ENSMUST00000039280 SptssbQ925E8 76 aa10.04□□□□□ -0.8
Scaf4-201ENSMUST00000039280 A0A286YE49 62 aa10.04□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Elof1P60003 83 aa10.03□□□□□ -0.8
Scaf4-201ENSMUST00000039280 Igkv8-28A0A0G2JE47 121 aa10.01□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Gm5617Q91VN2 117 aa10.01□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Gm11213A0A1B0GR83 88 aa10.01□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Cox6a2P43023 97 aa10.01□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Wfdc17Q5SSJ1 76 aa10□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Mrpl34Q99N91 92 aa10□□□□□ -0.81
Scaf4-201ENSMUST00000039280 1700074P13RikQ9D9G7 251 aa10□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Ly6g6cQ9Z1Q4 126 aa10□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Igkv3-12A0A140T8P0 119 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms